source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	52198059	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52198059	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52198066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B122,C8,C82
typical_cds_rare	Chr1	52198077	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52198080	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B66,C79
typical_cds_rare	Chr1	52198084	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B129
typical_cds_rare	Chr1	52198089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B66,C79
typical_cds_rare	Chr1	52198110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C28
typical_cds_rare	Chr1	52198141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C39
typical_cds_rare	Chr1	52198153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B97,C54,D8
typical_cds_rare	Chr1	52198213	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52198231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B122,D1,D6
typical_cds_rare	Chr1	52198244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52198262	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B28,B98,C34,C63,D8
lof_cds	Chr1	52198263	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	6	B110,B125,B137,B26,C1,C73
typical_cds_rare	Chr1	52198265	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B44,B73,B97,C54,D8
typical_cds_rare	Chr1	52198301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B20,C61
typical_cds_rare	Chr1	52198308	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B101,B78,D10
typical_cds_rare	Chr1	52198316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B101,C36,D1,D10
lof_cds	Chr1	52198323	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	30	A14,A19,A21,A9,B111,B123,B133,B135,B137,B138,B27,B31,B60,B64,B71,B81,B84,B87,B88,C1,C17,C22,C27,C35,C53,C64,C66,C86,C9,D5
typical_cds_rare	Chr1	52198333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B61,C36,D1
typical_cds_rare	Chr1	52198350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B35,B61,D10
lof_cds	Chr1	52198375	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	137	A1,A14,A15,A16,A18,A19,A2,A21,A22,A23,A24,A25,A3,A5,A8,A9,B100,B103,B104,B105,B107,B109,B11,B110,B113,B114,B115,B117,B118,B119,B125,B126,B128,B129,B132,B133,B134,B136,B137,B138,B139,B140,B16,B17,B20,B23,B25,B28,B29,B3,B32,B33,B35,B40,B46,B47,B49,B50,B52,B53,B55,B57,B59,B61,B64,B67,B70,B72,B73,B74,B77,B78,B81,B82,B83,B84,B85,B87,B90,B91,B93,B94,B97,B98,B99,C1,C15,C17,C2,C20,C22,C23,C25,C26,C27,C28,C3,C33,C34,C35,C36,C42,C43,C45,C48,C5,C53,C54,C56,C58,C6,C61,C63,C64,C65,C66,C67,C69,C71,C74,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D10,D11,D2,D4,D8,D9
lof_cds	Chr1	52198378	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	132	A1,A14,A15,A16,A18,A19,A2,A21,A22,A23,A24,A3,A5,A8,A9,B100,B101,B103,B104,B105,B109,B11,B110,B113,B114,B115,B117,B118,B125,B126,B128,B129,B132,B133,B134,B136,B137,B138,B139,B140,B16,B17,B20,B23,B25,B28,B29,B3,B32,B33,B35,B40,B46,B47,B49,B50,B52,B53,B55,B57,B59,B61,B64,B67,B70,B72,B73,B74,B77,B78,B81,B82,B83,B84,B85,B87,B91,B93,B94,B97,B98,B99,C1,C15,C17,C2,C22,C23,C25,C26,C27,C28,C3,C33,C34,C35,C36,C42,C43,C45,C48,C5,C53,C54,C56,C58,C6,C61,C63,C64,C65,C66,C67,C71,C74,C78,C79,C8,C80,C81,C82,C83,C84,C86,C87,C9,D10,D11,D2,D4,D8,D9
typical_cds_rare	Chr1	52198382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B101,B61,C36
typical_cds_rare	Chr1	52198393	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	A2,A22,B109,C58,C84
lof_cds	Chr1	52198404	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B101,B123,B61,C49
typical_cds_rare	Chr1	52198404	C	CCA	INDEL	2bp_insertion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B101,B123,B61,C49
lof_cds	Chr1	52198407	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B101,B123,B61,C49
typical_cds_rare	Chr1	52198407	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B101,B123,B61,C49
typical_cds_rare	Chr1	52198426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B129
typical_cds_rare	Chr1	52198450	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B114,C44,C64,C66,C9
typical_cds_rare	Chr1	52198451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B110,C15,C78
typical_cds_rare	Chr1	52198471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B117,B67
lof_cds	Chr1	52198485	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	A11,B10,C74
typical_cds_rare	Chr1	52198485	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	A11,B10,C74
lof_cds	Chr1	52198520	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	38	A14,A20,B100,B119,B123,B133,B134,B20,B25,B31,B34,B49,B55,B64,B69,B71,B78,B87,B88,C1,C17,C2,C22,C23,C27,C28,C35,C41,C45,C50,C62,C64,C73,C74,C8,C81,C86,C9
lof_cds	Chr1	52198521	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	36	A14,A20,B100,B119,B123,B133,B134,B20,B25,B31,B34,B49,B55,B64,B69,B71,B78,B87,B88,C1,C17,C2,C22,C23,C27,C35,C41,C45,C50,C62,C64,C74,C8,C81,C86,C9
lof_cds	Chr1	52198525	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	7	A2,A22,B109,C33,C65,C81,C86
lof_cds	Chr1	52198539	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	34	A1,A14,A15,A19,A2,A22,A5,B109,B11,B113,B114,B136,B46,B54,B65,B72,B77,B83,C17,C21,C24,C25,C33,C43,C44,C45,C65,C66,C70,C81,C86,D4,D6,D8
lof_cds	Chr1	52198550	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	38	A14,A15,A19,A2,A22,A5,B109,B11,B113,B114,B136,B46,B49,B54,B65,B71,B77,B83,C17,C24,C25,C33,C42,C43,C44,C45,C50,C64,C65,C66,C70,C81,C83,C86,C9,D4,D6,D8
typical_cds_rare	Chr1	52198595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B81
typical_cds_rare	Chr1	52198596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B122,C8
typical_cds_rare	Chr1	52198635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D10
typical_cds_rare	Chr1	52198649	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C38
lof_cds	Chr1	52198665	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	8	A2,A21,A23,B28,C22,C42,C58,C65
lof_cds	Chr1	52198677	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B33
typical_cds_rare	Chr1	52198677	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B33
typical_cds_rare	Chr1	52198680	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B21,C51
typical_cds_rare	Chr1	52198694	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	C51,D2
typical_cds_rare	Chr1	52198695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B51
typical_cds_rare	Chr1	52198705	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	C51,D2
lof_cds	Chr1	52198719	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	19	A18,A4,B112,B124,B125,B131,B136,B18,B57,B66,B70,B76,C35,C37,C41,C63,C73,D6,D7
lof_cds	Chr1	52198722	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	19	A18,A4,B112,B124,B125,B131,B136,B18,B57,B66,B70,B76,C35,C37,C41,C63,C73,D6,D7
typical_cds_rare	Chr1	52198723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B109,B129,B50,D2
typical_cds_rare	Chr1	52198761	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B122,B81,C8,C82
typical_cds_rare	Chr1	52198812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52198831	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B25,C84
typical_cds_rare	Chr1	52198844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B1,B58,B65,C19,C48
lof_cds	Chr1	52198851	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	6	B129,B36,B91,B92,C63,D11
typical_cds_rare	Chr1	52198858	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B50,B68
typical_cds_rare	Chr1	52198892	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B81
lof_cds	Chr1	52198897	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	39	A5,A7,B101,B11,B114,B115,B118,B125,B13,B132,B4,B46,B53,B59,B67,B78,B84,B85,B88,C10,C16,C22,C25,C33,C34,C35,C46,C5,C51,C56,C65,C73,C74,C75,C83,C87,D1,D10,D11
lof_cds	Chr1	52198898	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	37	A13,A16,A25,A3,B1,B10,B110,B127,B133,B134,B137,B18,B26,B27,B29,B3,B30,B42,B5,B51,B58,B69,B75,B80,B83,B85,C1,C12,C13,C3,C30,C59,C70,C74,C76,D5,D7
lof_cds	Chr1	52198902	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	6	A11,B44,B73,B97,C54,D8
lof_cds	Chr1	52198936	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	13	A2,A21,A23,B109,B28,B80,C22,C23,C33,C42,C58,C84,C9
lof_cds	Chr1	52198938	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	100	A1,A16,A20,A4,A5,A7,A8,B102,B104,B106,B108,B109,B110,B112,B113,B119,B120,B126,B128,B129,B130,B131,B132,B134,B135,B14,B15,B18,B19,B2,B20,B21,B22,B23,B25,B3,B31,B32,B33,B34,B37,B39,B4,B40,B45,B46,B49,B50,B53,B56,B57,B58,B6,B61,B62,B66,B68,B75,B76,B77,B78,B79,B8,B86,B93,B96,B99,C1,C12,C18,C19,C2,C23,C26,C27,C29,C31,C35,C38,C39,C41,C46,C5,C51,C52,C60,C61,C7,C70,C71,C72,C75,C87,D1,D2,D4,D5,D6,D7,D9
lof_cds	Chr1	52198941	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	12	A2,A21,A23,B109,B28,B80,C22,C23,C33,C42,C58,C9
typical_cds_rare	Chr1	52198951	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B110,B129,B21
lof_cds	Chr1	52198977	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C17
typical_cds_rare	Chr1	52198977	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C17
typical_cds_rare	Chr1	52198978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B36,B90,B91,B92,D11
lof_cds	Chr1	52199013	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B112
typical_cds_rare	Chr1	52199013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B112
typical_cds_rare	Chr1	52199042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
lof_cds	Chr1	52199070	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	27	A1,A18,A5,A7,A8,B101,B113,B121,B126,B134,B139,B40,B48,B51,B57,B58,B59,B66,B73,B76,B85,C10,C38,C43,C51,C7,C87
lof_cds	Chr1	52199072	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	27	A1,A18,A5,A7,A8,B101,B113,B121,B126,B134,B139,B40,B48,B51,B57,B58,B59,B66,B73,B76,B85,C10,C38,C43,C51,C7,C87
typical_cds_rare	Chr1	52199103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B35,B64,C24
typical_cds_rare	Chr1	52199108	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B35,B64,C24
lof_cds	Chr1	52199132	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52199132	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52199139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	C6,C83
typical_cds_rare	Chr1	52199141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52199148	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B52
lof_cds	Chr1	52199173	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B115,B40,B68,B89
typical_cds_rare	Chr1	52199173	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B115,B40,B68,B89
lof_cds	Chr1	52199174	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D6
typical_cds_rare	Chr1	52199174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D6
typical_cds_rare	Chr1	52199201	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D10
typical_cds_rare	Chr1	52199202	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B33,B46,C60
typical_cds_rare	Chr1	52199222	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B48,B68,B99,C87
typical_cds_rare	Chr1	52199254	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B135,B87,B98
lof_cds	Chr1	52199258	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B8,C29,C5
typical_cds_rare	Chr1	52199258	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B8,C29,C5
typical_cds_rare	Chr1	52199260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B135,B98
typical_cds_rare	Chr1	52199262	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B80
typical_cds_rare	Chr1	52199280	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	A6
typical_cds_rare	Chr1	52199307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	5	B8,C29,C5,C7,C79
typical_cds_rare	Chr1	52199333	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B104,B28
typical_cds_rare	Chr1	52199347	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
lof_cds	Chr1	52199380	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	69	A1,A14,A2,A22,A23,A25,A5,B105,B107,B109,B11,B113,B114,B115,B118,B124,B130,B134,B136,B138,B16,B17,B28,B29,B49,B5,B54,B63,B65,B71,B72,B77,B80,B83,B84,B97,C14,C16,C17,C20,C21,C24,C25,C26,C29,C35,C36,C37,C42,C43,C44,C45,C50,C53,C54,C57,C58,C64,C65,C66,C75,C81,C83,C84,C86,C9,D1,D4,D8
typical_cds_rare	Chr1	52199387	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B114,C31
lof_cds	Chr1	52199397	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	20	A10,A20,B103,B120,B58,B59,B63,B70,B72,B8,B86,B87,B90,B91,C14,C18,C50,C57,D10,D9
lof_cds	Chr1	52199398	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	6	A22,A4,A5,B126,B45,B70
typical_cds_rare	Chr1	52199407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B114,C31,C35
typical_cds_rare	Chr1	52199428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B61,C29
typical_cds_rare	Chr1	52199429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	C87
typical_cds_rare	Chr1	52199448	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B114,B21,C31,C35
typical_cds_rare	Chr1	52199471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B114,C31
typical_cds_rare	Chr1	52199502	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B122,C8,C82
typical_cds_rare	Chr1	52199520	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B4,C76,D4
typical_cds_rare	Chr1	52199553	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B114,C31,C64
typical_cds_rare	Chr1	52199558	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B140
typical_cds_rare	Chr1	52199622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	B122,D6
typical_cds_rare	Chr1	52199627	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B105,C2,C9,D2
typical_cds_rare	Chr1	52199672	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D10
typical_cds_rare	Chr1	52199702	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	2	C8,C82
typical_cds_rare	Chr1	52199741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B65,B70,C31
typical_cds_rare	Chr1	52199747	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	4	B13,C10,C7,D4
lof_cds	Chr1	52199750	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52199750	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D11
typical_cds_rare	Chr1	52199815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	D10
typical_cds_rare	Chr1	52199868	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	3	B122,C8,C82
typical_cds_rare	Chr1	52199876	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B73
lof_cds	Chr1	52199894	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	8	B102,B113,B32,B50,B66,B67,B96,C21
lof_cds	Chr1	52199898	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	6	B113,B32,B50,B66,B67,B96
typical_cds_rare	Chr1	52199909	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009784	SmilChr01G003341	131009784	rna-XM_057937192.1	1	B52