source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	52401637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C79
typical_cds_rare	Chr1	52401653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	A19,B55,B74,C30,C44
typical_cds_rare	Chr1	52401658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B113,C66
typical_cds_rare	Chr1	52401693	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	A15,B14,B5,C36,C50
lof_cds	Chr1	52401694	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B123
typical_cds_rare	Chr1	52401694	TGA	T	INDEL	2bp_deletion	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B123
typical_cds_rare	Chr1	52401699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B103,C43,C78
lof_cds	Chr1	52401701	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	6	B10,B103,B3,B35,B41,B88
typical_cds_rare	Chr1	52401714	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	D10
typical_cds_rare	Chr1	52401732	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	4	B25,B75,B89,C38
typical_cds_rare	Chr1	52401738	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	B134,B43,C38,C56,C63
typical_cds_rare	Chr1	52401743	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B103,B64,C76
lof_cds	Chr1	52401803	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	33	A16,A18,A19,A3,A4,A7,B100,B107,B108,B121,B27,B28,B29,B30,B31,B33,B6,B67,B69,B70,B71,B72,B76,B78,B80,B90,B92,C21,C34,C35,C54,C57,C8
lof_cds	Chr1	52401806	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	6	A1,B111,B139,B79,C17,C47
typical_cds_rare	Chr1	52401815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	A14,A25,B11,B60,B74
typical_cds_rare	Chr1	52401852	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	4	B85,C1,C38,C39
typical_cds_rare	Chr1	52401925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	A19,B86,C36
typical_cds_rare	Chr1	52401950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	C23,C28
typical_cds_rare	Chr1	52401958	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C68
typical_cds_rare	Chr1	52401960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B31,B88
typical_cds_rare	Chr1	52401961	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B88,C77,C83
typical_cds_rare	Chr1	52401962	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B13,D8
typical_cds_rare	Chr1	52401978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B84,C22,D9
typical_cds_rare	Chr1	52401990	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C43
lof_cds	Chr1	52402010	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B100
typical_cds_rare	Chr1	52402010	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B100
typical_cds_rare	Chr1	52402139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B123,B139,D10
typical_cds_rare	Chr1	52402170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C56
lof_cds	Chr1	52402206	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A2,B40
typical_cds_rare	Chr1	52402206	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A2,B40
typical_cds_rare	Chr1	52402356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B123,B19,C78
lof_cds	Chr1	52402364	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	7	A21,B32,B61,C49,C56,C78,C87
typical_cds_rare	Chr1	52402369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	A19,B59,C74
typical_cds_rare	Chr1	52402377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B16,C45
lof_cds	Chr1	52402392	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	8	A16,B121,B30,B66,B93,C35,C54,C68
typical_cds_rare	Chr1	52402403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A3,B60
typical_cds_rare	Chr1	52402409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	C12,C53
typical_cds_rare	Chr1	52402417	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B114,C76
lof_cds	Chr1	52402437	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B13
typical_cds_rare	Chr1	52402437	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B13
lof_cds	Chr1	52402446	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	44	A10,A13,A16,A20,A22,A24,A6,A7,B1,B138,B139,B16,B17,B18,B22,B30,B37,B48,B5,B58,B63,B65,B66,B94,C11,C12,C14,C27,C35,C4,C41,C43,C47,C5,C50,C52,C54,C57,C58,C67,C68,C70,C75,C9
typical_cds_rare	Chr1	52402457	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B21,B59,B83
typical_cds_rare	Chr1	52402470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A11,C35
typical_cds_rare	Chr1	52402512	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	A3,B115,B86,C17,C19
lof_cds	Chr1	52402693	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C68
typical_cds_rare	Chr1	52402693	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C68
typical_cds_rare	Chr1	52402701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	5	B104,B36,C45,C49,C69
typical_cds_rare	Chr1	52402723	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	D10
typical_cds_rare	Chr1	52402725	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C52
typical_cds_rare	Chr1	52402735	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	B111,B72,C79
typical_cds_rare	Chr1	52402739	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B23
typical_cds_rare	Chr1	52402746	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C18
typical_cds_rare	Chr1	52402780	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	B26,C47
lof_cds	Chr1	52402929	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	4	B107,B86,C46,C81
typical_cds_rare	Chr1	52402929	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	4	B107,B86,C46,C81
typical_cds_rare	Chr1	52402979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	3	A4,B40,C25
typical_cds_rare	Chr1	52402998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A4,C25
typical_cds_rare	Chr1	52403005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	C18
typical_cds_rare	Chr1	52403011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A4,C25
typical_cds_rare	Chr1	52403047	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	2	A13,C73
typical_cds_rare	Chr1	52403058	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009825	SmilChr01G003366	131009825	rna-XM_057937231.1	1	B4
