source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	52999259	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B135
typical_cds_rare	Chr1	52999263	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B23,C15
typical_cds_rare	Chr1	52999287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B128,B6,C52
typical_cds_rare	Chr1	52999313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	A19,B36
typical_cds_rare	Chr1	52999319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	A19,B36
lof_cds	Chr1	52999321	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B53,B8
typical_cds_rare	Chr1	52999321	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B53,B8
lof_cds	Chr1	52999323	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B53,B8
typical_cds_rare	Chr1	52999323	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B53,B8
typical_cds_rare	Chr1	52999327	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B53,B8
lof_cds	Chr1	52999389	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	D4
typical_cds_rare	Chr1	52999389	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	D4
typical_cds_rare	Chr1	52999395	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	A21,C27
typical_cds_rare	Chr1	52999409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B32,C74
lof_cds	Chr1	52999442	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C56
typical_cds_rare	Chr1	52999442	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C56
typical_cds_rare	Chr1	52999447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B140,B2,C33
typical_cds_rare	Chr1	52999451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C56
typical_cds_rare	Chr1	52999452	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C6
typical_cds_rare	Chr1	52999463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B22
typical_cds_rare	Chr1	52999467	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	A9,B134,B21
typical_cds_rare	Chr1	52999472	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B15
lof_cds	Chr1	52999482	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	7	A9,B123,B134,B38,B39,C27,C58
typical_cds_rare	Chr1	52999493	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B83
typical_cds_rare	Chr1	52999501	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	A20,A8,B132,B57
typical_cds_rare	Chr1	52999527	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	B112,B15,B68,C13,C2
typical_cds_rare	Chr1	52999534	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B17,C20,C39
typical_cds_rare	Chr1	52999547	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	B58,C14,C36,C50,D5
typical_cds_rare	Chr1	52999548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B13
lof_cds	Chr1	52999582	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	11	B12,B18,B22,B68,B86,B88,B98,C1,C16,C19,C86
typical_cds_rare	Chr1	52999589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	B112,B122,B29,B68
typical_cds_rare	Chr1	52999605	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	A9,B123,B134
lof_cds	Chr1	52999633	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	14	A7,B107,B122,B14,B3,B38,B62,B75,C13,C43,C51,C58,C77,D1
typical_cds_rare	Chr1	52999648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B64
lof_cds	Chr1	52999672	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B30,B44
typical_cds_rare	Chr1	52999672	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B30,B44
typical_cds_rare	Chr1	52999680	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B68
lof_cds	Chr1	52999684	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	14	A10,A13,A15,B100,B59,B64,B69,B93,B98,C23,C5,C53,C7,C82
typical_cds_rare	Chr1	52999685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B68
typical_cds_rare	Chr1	52999698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B19
typical_cds_rare	Chr1	52999699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	B18,B23,C18,D8
typical_cds_rare	Chr1	52999709	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	A9,B119,B123,B134,C3
typical_cds_rare	Chr1	52999714	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	C73,C83
lof_cds	Chr1	52999719	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B122,B24,C82
typical_cds_rare	Chr1	52999719	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B122,B24,C82
typical_cds_rare	Chr1	52999728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B114,B73,C48
typical_cds_rare	Chr1	52999729	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	A9,B119,B123,B134
typical_cds_rare	Chr1	52999733	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	B21,B60,B85,B98
typical_cds_rare	Chr1	52999745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	A3,B21,C87,D5
typical_cds_rare	Chr1	52999761	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	A2,B110,B39,C71
typical_cds_rare	Chr1	52999762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B123,C43
typical_cds_rare	Chr1	52999774	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C3
typical_cds_rare	Chr1	52999792	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C26
typical_cds_rare	Chr1	52999806	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B26
typical_cds_rare	Chr1	52999824	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	A23,B29,B65
typical_cds_rare	Chr1	52999842	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C4
typical_cds_rare	Chr1	52999846	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	A13,C14
typical_cds_rare	Chr1	52999847	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	B117,B71,C33,C70
typical_cds_rare	Chr1	52999860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C29
typical_cds_rare	Chr1	52999861	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C62
typical_cds_rare	Chr1	52999862	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	C29,C33
typical_cds_rare	Chr1	52999910	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B108,B67
typical_cds_rare	Chr1	52999924	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	A9,B123,B134,B21
typical_cds_rare	Chr1	52999952	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	4	B67,C34,C70,D6
typical_cds_rare	Chr1	53000003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	A21,C13,C22
typical_cds_rare	Chr1	53000016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B101,C87,D11
typical_cds_rare	Chr1	53000021	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B122,C82
typical_cds_rare	Chr1	53000032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C19
typical_cds_rare	Chr1	53000034	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B86
typical_cds_rare	Chr1	53000036	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B5
typical_cds_rare	Chr1	53000038	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	A13,B36,B89,C87,D8
typical_cds_rare	Chr1	53000040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	C20,C28,C75
typical_cds_rare	Chr1	53000045	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B17
typical_cds_rare	Chr1	53000077	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	B65
typical_cds_rare	Chr1	53000090	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	3	B136,C20,C28
typical_cds_rare	Chr1	53000113	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	A21,B82
lof_cds	Chr1	53000137	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	15	A2,B110,B13,B37,B38,B39,B55,B70,B78,B82,C12,C20,C71,C75,D1
typical_cds_rare	Chr1	53000147	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	B107,B132,B94,C24,C43
typical_cds_rare	Chr1	53000149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	5	A13,A16,A20,B62,B68
lof_cds	Chr1	53000176	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C31
typical_cds_rare	Chr1	53000176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	1	C31
lof_cds	Chr1	53000224	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B86,C13
typical_cds_rare	Chr1	53000224	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131009917	SmilChr01G003442	131009917	rna-XM_057937319.1	2	B86,C13