source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	53419576	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	51	A1,A4,A5,A7,B101,B112,B131,B136,B138,B14,B16,B2,B22,B25,B28,B29,B34,B44,B47,B56,B60,B68,B70,B71,B76,B82,B85,B88,B89,B93,B96,C10,C23,C3,C32,C34,C38,C42,C43,C48,C5,C50,C51,C61,C67,C7,C73,C8,C80,C81,C86
typical_cds_rare	Chr1	53419663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A1,B117,B30,B63,C4
typical_cds_rare	Chr1	53419664	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	A19,B17,B64
typical_cds_rare	Chr1	53419667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	D3
typical_cds_rare	Chr1	53419670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A1,B117,B30,B63,C4
lof_cds	Chr1	53419671	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	209	A1,A10,A13,A14,A15,A16,A18,A19,A2,A21,A22,A23,A24,A25,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B104,B106,B107,B108,B109,B11,B110,B111,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B125,B126,B127,B128,B13,B130,B131,B132,B133,B134,B135,B137,B139,B15,B16,B17,B2,B20,B21,B22,B23,B24,B25,B26,B27,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B49,B51,B52,B53,B54,B55,B56,B57,B58,B62,B63,B64,B65,B66,B67,B68,B69,B7,B71,B72,B74,B75,B79,B8,B80,B83,B84,B86,B87,B88,B9,B90,B91,B92,B94,B95,B96,B97,B98,B99,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C21,C22,C24,C25,C27,C28,C29,C3,C30,C32,C33,C34,C37,C38,C4,C40,C41,C42,C43,C44,C45,C47,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C69,C70,C71,C72,C73,C74,C75,C77,C78,C79,C8,C81,C82,C83,C85,C86,C87,C9,D1,D11,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	53419679	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A1,B117,B30,B63,C4
lof_cds	Chr1	53419698	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	214	A1,A10,A13,A14,A15,A16,A18,A19,A2,A21,A22,A23,A24,A25,A4,A5,A6,A7,A8,B1,B10,B100,B101,B102,B103,B104,B106,B107,B108,B109,B11,B110,B111,B113,B115,B117,B118,B119,B12,B120,B121,B123,B125,B126,B127,B128,B13,B130,B131,B132,B133,B134,B135,B137,B139,B15,B16,B17,B2,B20,B21,B22,B23,B24,B25,B26,B27,B29,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B40,B41,B42,B44,B45,B46,B47,B49,B5,B51,B52,B53,B54,B55,B56,B57,B58,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B71,B72,B73,B74,B75,B78,B79,B8,B80,B83,B84,B86,B87,B88,B9,B90,B91,B92,B93,B94,B95,B96,B97,B99,C1,C10,C11,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C24,C25,C26,C27,C29,C3,C30,C31,C32,C33,C34,C36,C37,C38,C4,C40,C41,C42,C43,C44,C45,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C69,C70,C71,C72,C73,C74,C75,C77,C78,C79,C8,C82,C83,C84,C85,C86,C87,C9,D1,D11,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	53419721	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B117,B30,B63
typical_cds_rare	Chr1	53419723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B134,C14,C4
typical_cds_rare	Chr1	53419740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B134,C14,C4
typical_cds_rare	Chr1	53419746	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	B134,B63,B86,C14,C4
typical_cds_rare	Chr1	53419747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B134,C14,C4
typical_cds_rare	Chr1	53419754	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B134,C14,C4
lof_cds	Chr1	53419806	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	11	A20,A25,B18,B28,B37,B42,B65,B87,C37,C57,C76
typical_cds_rare	Chr1	53419832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B23
lof_cds	Chr1	53419885	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B126
typical_cds_rare	Chr1	53419885	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B126
lof_cds	Chr1	53419924	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B134,B77,C14,C4
typical_cds_rare	Chr1	53419924	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B134,B77,C14,C4
typical_cds_rare	Chr1	53419928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B134,B77,C14,C4
lof_cds	Chr1	53419942	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	7	B12,B134,B77,C14,C4,C57,D7
typical_cds_rare	Chr1	53419984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B17,B64
typical_cds_rare	Chr1	53419998	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	C44
typical_cds_rare	Chr1	53420025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B12
typical_cds_rare	Chr1	53420030	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A23,D10
lof_cds	Chr1	53420072	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B1,B101,B35,B68
typical_cds_rare	Chr1	53420072	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B1,B101,B35,B68
lof_cds	Chr1	53420079	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	11	B121,B126,B34,B59,B62,B71,B98,C20,C62,C64,C66
lof_cds	Chr1	53420084	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	10	A5,B104,B130,B14,B95,C25,C30,C34,C67,D2
lof_cds	Chr1	53420088	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	10	A5,B104,B130,B14,B95,C25,C30,C34,C67,D2
lof_cds	Chr1	53420106	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	6	A5,B14,B95,C25,C44,C67
lof_cds	Chr1	53420172	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A10,B28
typical_cds_rare	Chr1	53420172	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A10,B28
typical_cds_rare	Chr1	53420184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A20,B50
typical_cds_rare	Chr1	53420214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B12
lof_cds	Chr1	53420215	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	10	A4,A5,B73,B95,C34,C44,C57,C67,C74,D2
lof_cds	Chr1	53420218	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	10	A4,A5,B73,B95,C34,C44,C57,C67,C74,D2
lof_cds	Chr1	53420250	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	7	A19,B17,B26,B8,C17,C7,C83
lof_cds	Chr1	53420254	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	6	B73,B95,C34,C44,C57,C66
lof_cds	Chr1	53420257	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	6	B73,B95,C34,C44,C57,C66
lof_cds	Chr1	53420265	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	B73,B95,C34,C57,C66
typical_cds_rare	Chr1	53420265	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	B73,B95,C34,C57,C66
lof_cds	Chr1	53420277	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	142	A10,A14,A15,A19,A2,A20,A21,A22,A25,A4,A5,A7,A8,B1,B100,B104,B105,B106,B108,B11,B115,B120,B125,B127,B13,B133,B134,B136,B14,B15,B16,B17,B18,B19,B2,B20,B21,B23,B24,B25,B26,B28,B29,B3,B31,B32,B33,B35,B36,B38,B39,B4,B44,B45,B46,B47,B48,B49,B5,B51,B52,B54,B56,B58,B6,B60,B62,B63,B64,B66,B68,B69,B71,B72,B73,B77,B8,B80,B81,B83,B87,B88,B89,B9,B90,B91,B92,B95,B97,B98,B99,C10,C15,C17,C18,C21,C22,C24,C26,C27,C28,C3,C30,C31,C32,C34,C35,C37,C38,C4,C40,C41,C43,C44,C45,C49,C53,C54,C55,C56,C58,C59,C6,C60,C63,C64,C65,C66,C67,C68,C7,C70,C71,C72,C77,C78,C8,C85,C86,C9,D7,D9
typical_cds_rare	Chr1	53420284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B73,B95,C44,C66
typical_cds_rare	Chr1	53420324	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A24,B131,B82,B88,C33
lof_cds	Chr1	53420365	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	42	A16,A25,A6,A8,B10,B100,B119,B120,B121,B139,B14,B15,B18,B27,B34,B41,B45,B51,B6,B63,B72,B84,B95,B99,C10,C16,C22,C25,C26,C27,C32,C38,C44,C46,C51,C55,C68,C69,C74,D4,D5,D8
typical_cds_rare	Chr1	53420375	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B16
typical_cds_rare	Chr1	53420403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B3,C12,C15,C42
typical_cds_rare	Chr1	53420407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B12,C14
lof_cds	Chr1	53420435	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	72	A1,A13,A15,A18,A25,B101,B103,B107,B110,B111,B114,B122,B124,B128,B13,B131,B137,B139,B20,B21,B25,B26,B31,B32,B35,B38,B39,B49,B53,B60,B69,B71,B74,B76,B77,B81,B9,B90,B94,B98,C1,C11,C12,C15,C17,C18,C2,C20,C21,C25,C26,C36,C4,C43,C44,C49,C5,C50,C51,C52,C6,C60,C61,C62,C65,C69,C71,C78,C82,D1,D3,D6
lof_cds	Chr1	53420445	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	A10,A18,B66
typical_cds_rare	Chr1	53420445	GTC	G	INDEL	2bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	A10,A18,B66
typical_cds_rare	Chr1	53420477	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	D5
lof_cds	Chr1	53420485	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	23	A22,A23,A6,B127,B19,B2,B34,B57,B73,B74,B76,C1,C18,C19,C22,C24,C40,C44,C49,C55,C63,C74,D7
lof_cds	Chr1	53420526	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	60	A16,A25,A6,B10,B100,B104,B118,B119,B121,B122,B127,B139,B14,B16,B18,B24,B27,B28,B32,B33,B41,B45,B64,B68,B72,B76,B8,B80,B99,C10,C13,C16,C2,C22,C25,C26,C29,C32,C37,C38,C42,C45,C46,C51,C53,C55,C60,C68,C69,C7,C72,C73,C74,C80,C84,C86,C9,D2,D4,D5
typical_cds_rare	Chr1	53420574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B26
lof_cds	Chr1	53420576	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B2,C8
typical_cds_rare	Chr1	53420576	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B2,C8
typical_cds_rare	Chr1	53420594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B12,C57,D7
lof_cds	Chr1	53420595	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	143	A10,A14,A15,A18,A2,A20,A22,A25,A3,A4,A5,A6,A7,A8,B1,B100,B105,B106,B108,B11,B112,B114,B115,B120,B125,B127,B13,B132,B133,B134,B136,B14,B16,B17,B18,B19,B2,B21,B23,B24,B25,B26,B29,B31,B33,B36,B38,B39,B4,B44,B45,B46,B47,B48,B49,B5,B51,B52,B54,B56,B58,B6,B60,B62,B63,B64,B66,B68,B69,B71,B72,B73,B74,B78,B8,B80,B81,B83,B87,B88,B89,B9,B90,B91,B92,B95,B96,B97,B98,B99,C12,C15,C17,C18,C2,C21,C22,C24,C27,C28,C3,C32,C34,C37,C38,C40,C41,C43,C44,C45,C47,C49,C52,C53,C54,C55,C56,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C7,C70,C71,C72,C74,C77,C78,C8,C81,C84,C85,C86,C9,D11,D7,D9
lof_cds	Chr1	53420606	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B13,B75
typical_cds_rare	Chr1	53420606	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	B13,B75
lof_cds	Chr1	53420628	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	28	A25,B100,B104,B119,B127,B15,B2,B40,B64,B69,B72,B79,B8,B80,B88,C10,C17,C26,C29,C32,C5,C68,C69,C72,C73,C74,D4,D9
lof_cds	Chr1	53420631	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	27	A25,B100,B104,B119,B127,B15,B2,B40,B64,B69,B72,B79,B8,B80,B88,C10,C17,C26,C29,C32,C5,C68,C69,C73,C74,D4,D9
typical_cds_rare	Chr1	53420632	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B134,B65,C14,C4
typical_cds_rare	Chr1	53420651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	A20,B12,B50,C57
lof_cds	Chr1	53420668	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	135	A10,A14,A15,A18,A2,A21,A22,A25,A3,A4,A6,A7,A8,B1,B100,B104,B105,B106,B108,B11,B112,B114,B115,B120,B127,B13,B132,B133,B134,B136,B14,B16,B17,B18,B19,B2,B21,B23,B24,B25,B26,B29,B31,B33,B35,B36,B38,B39,B4,B44,B45,B46,B47,B48,B49,B5,B51,B53,B54,B56,B58,B6,B60,B62,B63,B64,B66,B68,B69,B71,B72,B73,B74,B8,B80,B83,B87,B89,B9,B90,B91,B92,B95,B96,B98,B99,C12,C15,C17,C18,C2,C21,C22,C24,C26,C27,C3,C32,C35,C37,C38,C4,C40,C41,C43,C44,C45,C47,C49,C52,C53,C54,C55,C56,C59,C6,C60,C62,C63,C64,C65,C66,C67,C68,C70,C71,C72,C77,C78,C8,C81,C85,C9,D11,D9
typical_cds_rare	Chr1	53420730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B103,B126,C13
typical_cds_rare	Chr1	53420739	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B12,C57,D7
typical_cds_rare	Chr1	53420744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B23
typical_cds_rare	Chr1	53420745	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B23
typical_cds_rare	Chr1	53420823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B12,C57,D7
typical_cds_rare	Chr1	53420843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B12,C57,D7
typical_cds_rare	Chr1	53420894	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	C80
typical_cds_rare	Chr1	53420930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	B114
typical_cds_rare	Chr1	53420976	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	4	B134,B65,C14,C4
lof_cds	Chr1	53421011	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A21,B139,B42,B43,C13
typical_cds_rare	Chr1	53421011	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A21,B139,B42,B43,C13
typical_cds_rare	Chr1	53421012	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	5	A21,B139,B42,B43,C13
lof_cds	Chr1	53421052	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	A21,C13,C35
typical_cds_rare	Chr1	53421052	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	A21,C13,C35
lof_cds	Chr1	53421089	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	9	A19,B17,B26,B8,C17,C26,C7,C75,C83
typical_cds_rare	Chr1	53421155	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A21,C13
lof_cds	Chr1	53421159	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	68	A14,A16,A22,A23,A4,A5,B112,B113,B117,B119,B12,B126,B129,B130,B132,B138,B29,B3,B31,B32,B40,B42,B45,B5,B53,B57,B58,B60,B62,B63,B7,B70,B74,B78,B80,B81,B91,B93,B95,B99,C19,C26,C27,C28,C3,C31,C32,C35,C36,C37,C39,C42,C45,C46,C47,C61,C63,C66,C67,C68,C7,C77,C84,C85,C86,D5,D8,D9
lof_cds	Chr1	53421164	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A21,C13
typical_cds_rare	Chr1	53421164	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	2	A21,C13
typical_cds_rare	Chr1	53421537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	1	C53
lof_cds	Chr1	53421538	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	8	A18,B119,B125,B55,B65,B90,C11,C23
lof_cds	Chr1	53421539	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B125,B65,B90
typical_cds_rare	Chr1	53421539	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131009979	SmilChr01G003487	131009979	rna-XM_057937376.1	3	B125,B65,B90