source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	53935230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1	4	B102,B56,B64,B96
typical_cds_rare	Chr1	53935244	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1	1	C82
typical_cds_rare	Chr1	53935261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1	1	B104
typical_cds_rare	Chr1	53935551	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1	2	A11,B125
typical_cds_rare	Chr1	53935844	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	A23,B35,C35,C37
typical_cds_rare	Chr1	53936019	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	A20,B32,D10
lof_cds	Chr1	53936680	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C47
typical_cds_rare	Chr1	53936680	CA	C	INDEL	1bp_deletion	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C47
lof_cds	Chr1	53936684	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C47
typical_cds_rare	Chr1	53936684	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C47
typical_cds_rare	Chr1	53936835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	B104,C11
lof_cds	Chr1	53936840	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	141	A1,A14,A16,A18,A19,A20,A23,A24,A25,A3,A7,A8,B1,B102,B104,B106,B107,B108,B109,B11,B110,B111,B113,B114,B119,B12,B120,B123,B124,B125,B126,B127,B129,B130,B133,B134,B135,B137,B139,B14,B140,B16,B17,B18,B22,B23,B25,B26,B28,B29,B30,B32,B33,B34,B36,B37,B38,B39,B4,B40,B41,B44,B46,B5,B50,B51,B52,B53,B57,B59,B6,B61,B62,B63,B66,B67,B69,B7,B70,B72,B74,B75,B76,B78,B79,B8,B80,B81,B82,B83,B89,B9,B91,B99,C12,C13,C14,C15,C2,C20,C23,C28,C3,C30,C33,C34,C36,C39,C41,C42,C45,C47,C5,C51,C52,C57,C59,C6,C62,C63,C64,C66,C67,C7,C70,C73,C74,C76,C79,C8,C82,C9,D1,D10,D11,D2,D5,D6,D7,D8,D9
lof_cds	Chr1	53937297	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B127,B69,C62,C70,C81
typical_cds_rare	Chr1	53937297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B127,B69,C62,C70,C81
lof_cds	Chr1	53937326	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C81
typical_cds_rare	Chr1	53937326	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C81
typical_cds_rare	Chr1	53937346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	B22,B41
typical_cds_rare	Chr1	53937355	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C5
lof_cds	Chr1	53937378	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	17	A25,B110,B127,B39,B56,B62,B69,B71,B96,C18,C38,C62,C63,C70,C71,C80,C86
typical_cds_rare	Chr1	53938435	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	B140
typical_cds_rare	Chr1	53938444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	B22,B28,B41,B77
typical_cds_rare	Chr1	53938578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	A16,C6,C8
typical_cds_rare	Chr1	53940085	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	A1,B33
typical_cds_rare	Chr1	53940231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C79
typical_cds_rare	Chr1	53940614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	B22,B28,B41,B77
typical_cds_rare	Chr1	53940656	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	A21
typical_cds_rare	Chr1	53940660	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B101,B94,C58,C80,C87
lof_cds	Chr1	53941292	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	17	A7,B111,B127,B14,B20,B25,B57,B60,B72,B80,B86,B88,B98,B99,C28,C31,C7
typical_cds_rare	Chr1	53942621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	B133,B5,B59
lof_cds	Chr1	53942649	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	17	A7,B111,B115,B127,B14,B20,B25,B57,B60,B72,B80,B86,B88,B99,C28,C31,C7
typical_cds_rare	Chr1	53942991	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	C10
typical_cds_rare	Chr1	53943772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B126,B63,B65,C43,C80
lof_cds	Chr1	53944222	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	B137,B33
typical_cds_rare	Chr1	53944222	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	B137,B33
lof_cds	Chr1	53944263	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	47	A11,A20,A22,A4,A8,B100,B102,B108,B119,B126,B13,B135,B137,B15,B19,B20,B26,B27,B28,B36,B37,B41,B45,B47,B49,B51,B64,B70,B72,B75,B79,B8,B87,B95,B96,B97,C1,C18,C38,C43,C45,C48,C53,C61,C64,C7,C77
typical_cds_rare	Chr1	53944264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B117,B47,C16,C65,C84
lof_cds	Chr1	53944265	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	45	A11,A20,A22,A4,A8,B100,B102,B108,B119,B126,B13,B135,B137,B15,B19,B20,B26,B28,B36,B37,B41,B45,B47,B49,B51,B64,B70,B72,B75,B79,B8,B87,B95,B97,C1,C18,C38,C43,C45,C48,C53,C61,C64,C7,C77
typical_cds_rare	Chr1	53944760	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	B119
typical_cds_rare	Chr1	53944800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	A23,B77,C29,C6
typical_cds_rare	Chr1	53944822	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	A24,B113,B33,B76
typical_cds_rare	Chr1	53945313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	2	B25,B31
typical_cds_rare	Chr1	53945360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	1	B140
typical_cds_rare	Chr1	53945373	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	B137,B22,B41
typical_cds_rare	Chr1	53945400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	4	B103,B134,B78,C50
lof_cds	Chr1	53945533	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	180	A1,A13,A15,A16,A18,A2,A20,A21,A23,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B102,B103,B104,B105,B109,B110,B112,B115,B118,B119,B120,B121,B122,B123,B124,B127,B128,B129,B13,B131,B132,B136,B137,B139,B15,B16,B19,B2,B20,B21,B22,B23,B24,B26,B29,B3,B30,B31,B33,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B47,B48,B49,B50,B51,B52,B53,B54,B55,B56,B57,B58,B6,B60,B62,B64,B65,B67,B68,B7,B70,B71,B73,B74,B76,B78,B8,B80,B81,B83,B84,B86,B88,B9,B90,B91,B93,B94,B97,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C20,C21,C22,C26,C28,C29,C31,C34,C35,C36,C37,C38,C4,C41,C43,C44,C45,C46,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C65,C67,C68,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C83,C86,C87,C9,D1,D11,D2,D3,D6,D7,D8,D9
typical_cds_rare	Chr1	53945568	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	B137,B22,B41
typical_cds_rare	Chr1	53945569	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	3	C11,C12,C68
typical_cds_rare	Chr1	53945573	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130993674	SmilChr01G003532	130993674	rna-XM_057918669.1,rna-XM_057918679.1	5	B21,B32,B85,C49,D7