source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	54522870	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	70	A13,A14,A15,A4,A5,A6,A7,B108,B11,B121,B122,B134,B136,B15,B18,B27,B34,B38,B39,B45,B5,B51,B54,B58,B61,B64,B74,B8,B81,B91,B93,B94,C1,C12,C13,C14,C15,C17,C19,C2,C21,C23,C24,C25,C27,C29,C32,C40,C42,C46,C5,C54,C56,C57,C61,C63,C64,C66,C72,C74,C77,C78,C79,C82,C83,C84,D11,D3,D7,D9
lof_cds	Chr1	54522951	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	6	B137,B22,B61,B9,C34,C70
typical_cds_rare	Chr1	54522998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	2	B76,C61
lof_cds	Chr1	54523021	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	1	B51
typical_cds_rare	Chr1	54523021	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	1	B51
typical_cds_rare	Chr1	54523025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	B119,B40,C17,C81,D4
typical_cds_rare	Chr1	54523036	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	2	B71,C55
typical_cds_rare	Chr1	54523051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	1	C71
lof_cds	Chr1	54523082	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B123,B21,C59
typical_cds_rare	Chr1	54523082	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B123,B21,C59
typical_cds_rare	Chr1	54523085	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B123,B21,C59
typical_cds_rare	Chr1	54523086	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	1	B140
typical_cds_rare	Chr1	54523093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	2	A22,B128
lof_cds	Chr1	54523103	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	7	A11,B118,B40,B53,B6,C18,C62
typical_cds_rare	Chr1	54523105	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	A20,B128,B132,B137,B15
typical_cds_rare	Chr1	54523141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	4	B109,B123,B21,C59
typical_cds_rare	Chr1	54523174	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	4	A1,A11,B76,C48
typical_cds_rare	Chr1	54523208	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B136,B45,C50
lof_cds	Chr1	54523211	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B136,B45,C50
typical_cds_rare	Chr1	54523211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B136,B45,C50
lof_cds	Chr1	54523214	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	20	A10,A16,A9,B105,B24,B30,B57,B62,B71,B76,B79,B80,B87,B96,C39,C53,C55,C58,C6,D1
lof_cds	Chr1	54523239	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	39	A18,A5,A9,B1,B101,B102,B104,B108,B111,B128,B136,B140,B19,B24,B28,B34,B41,B50,B55,B62,B68,B69,B7,B83,B88,C19,C22,C34,C38,C42,C44,C45,C49,C55,C59,C76,C78,D4,D5
lof_cds	Chr1	54523240	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B15,B34,C40
typical_cds_rare	Chr1	54523240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	3	B15,B34,C40
lof_cds	Chr1	54523250	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	B106,B132,B2,B96,C16
typical_cds_rare	Chr1	54523250	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	B106,B132,B2,B96,C16
lof_cds	Chr1	54523262	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	B106,B132,B2,B96,C16
typical_cds_rare	Chr1	54523262	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	B106,B132,B2,B96,C16
typical_cds_rare	Chr1	54523263	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	4	B70,C13,C41,C52
typical_cds_rare	Chr1	54523265	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	5	A2,B129,B38,B67,C68
lof_cds	Chr1	54523274	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	23	A13,A22,A5,B101,B109,B136,B138,B45,B61,B62,B70,B75,C12,C13,C14,C19,C50,C53,C82,C85,C9,D10,D8
typical_cds_rare	Chr1	54523303	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	1	B66
typical_cds_rare	Chr1	54523306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	4	B12,B38,B78,C23
typical_cds_rare	Chr1	54523331	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010115	SmilChr01G003597	131010115	rna-XM_057937528.1	2	A11,C61