source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	54610437	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	5	B69,B70,C41,C52,C62
typical_cds_rare	Chr1	54610497	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C4
typical_cds_rare	Chr1	54610507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	D11
typical_cds_rare	Chr1	54610508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	3	A20,B132,B15
lof_cds	Chr1	54610582	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	50	B103,B113,B119,B12,B120,B125,B136,B138,B23,B38,B39,B42,B43,B45,B48,B51,B52,B54,B58,B61,B64,B71,B76,B78,B81,B90,B92,B94,C14,C17,C2,C23,C24,C4,C49,C5,C51,C55,C56,C61,C64,C66,C68,C71,C72,C77,C9,D2,D4,D8
lof_cds	Chr1	54610596	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C17
typical_cds_rare	Chr1	54610596	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C17
lof_cds	Chr1	54610599	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C17
typical_cds_rare	Chr1	54610599	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C17
lof_cds	Chr1	54610656	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	83	A11,A18,A21,A5,A9,B103,B106,B107,B111,B113,B118,B119,B12,B120,B125,B132,B136,B19,B23,B25,B27,B28,B31,B32,B33,B38,B39,B40,B42,B43,B45,B51,B52,B53,B54,B55,B58,B61,B64,B71,B76,B78,B81,B89,B90,B91,B92,B94,C14,C17,C2,C22,C23,C24,C25,C29,C36,C4,C41,C42,C45,C49,C5,C51,C55,C56,C58,C61,C62,C64,C66,C68,C72,C77,C82,C86,C9,D11,D2,D3,D4,D7,D8
typical_cds_rare	Chr1	54610661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	D10
typical_cds_rare	Chr1	54610663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	3	B128,B137,B15
typical_cds_rare	Chr1	54610678	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C11
lof_cds	Chr1	54610692	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C11
typical_cds_rare	Chr1	54610692	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	C11
lof_cds	Chr1	54610701	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	D10
typical_cds_rare	Chr1	54610701	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	D10
lof_cds	Chr1	54610703	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	36	A25,B117,B122,B123,B13,B131,B139,B14,B17,B22,B32,B41,B43,B56,B57,B76,B79,B81,B93,B94,B96,C15,C18,C26,C34,C37,C49,C54,C58,C59,C69,C70,C73,C74,C85,D1
lof_cds	Chr1	54610710	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	9	A4,B134,B137,B50,B60,B74,B88,C4,C84
typical_cds_rare	Chr1	54610713	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	2	B90,C41
lof_cds	Chr1	54610729	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	3	B138,C32,C37
typical_cds_rare	Chr1	54610729	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	3	B138,C32,C37
lof_cds	Chr1	54610742	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	2	B138,C32
typical_cds_rare	Chr1	54610742	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	2	B138,C32
lof_cds	Chr1	54610747	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	61	A25,A6,B101,B113,B117,B122,B123,B13,B131,B133,B14,B15,B17,B27,B34,B38,B39,B41,B50,B56,B59,B63,B66,B70,B72,B74,B76,B77,B79,B82,B85,B86,B93,B94,B98,B99,C1,C14,C15,C16,C18,C19,C27,C3,C34,C35,C37,C49,C53,C54,C55,C58,C63,C65,C67,C69,C74,C78,C8,D1,D9
lof_cds	Chr1	54610792	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	4	A21,B90,C41,D8
typical_cds_rare	Chr1	54610792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	4	A21,B90,C41,D8
typical_cds_rare	Chr1	54610840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	4	A21,B28,C86,C87
typical_cds_rare	Chr1	54610842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	4	A21,B28,C86,C87
typical_cds_rare	Chr1	54610844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	4	A21,B28,C86,C87
lof_cds	Chr1	54610845	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	32	A10,A25,B101,B105,B117,B123,B139,B14,B3,B32,B42,B43,B47,B50,B56,B76,B93,B94,B96,C34,C37,C45,C46,C49,C53,C55,C58,C59,C70,C74,C84,D1
lof_cds	Chr1	54610893	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	8	A18,A21,B12,B28,B79,B82,C86,C87
lof_cds	Chr1	54610896	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	8	A18,A21,B12,B28,B79,B82,C86,C87
lof_cds	Chr1	54611326	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	23	B114,B131,B132,B21,B36,B44,B50,B62,B71,B73,B75,B79,B87,B99,C11,C20,C32,C45,C54,C55,C85,C87,D1
lof_cds	Chr1	54611369	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	16	B131,B21,B44,B50,B62,B71,B75,B87,B99,C11,C15,C45,C54,C55,C85,C87
typical_cds_rare	Chr1	54611400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010168	SmilChr01G003607	131010168	rna-XM_057937590.1	1	B40