source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	54855206	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	C66
typical_cds_rare	Chr1	54855206	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	C66
typical_cds_rare	Chr1	54855207	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	B81
lof_cds	Chr1	54855208	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	4	B20,B36,C67,C69
typical_cds_rare	Chr1	54855208	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	4	B20,B36,C67,C69
typical_cds_rare	Chr1	54855622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	A21
typical_cds_rare	Chr1	54855772	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	C67
typical_cds_rare	Chr1	54855938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	B90
lof_cds	Chr1	54855997	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	B46
typical_cds_rare	Chr1	54855997	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	B46
lof_cds	Chr1	54856201	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	51	A1,A2,A21,A6,A7,A8,B10,B113,B114,B128,B13,B131,B132,B136,B139,B17,B34,B42,B43,B44,B46,B47,B58,B64,B65,B68,B7,B70,B72,B75,B76,B92,B93,B96,C13,C19,C28,C29,C3,C41,C47,C5,C56,C71,C76,C77,C81,C83,D10,D6,D7
lof_cds	Chr1	54856203	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	50	A11,A13,A21,A3,A7,A8,B1,B102,B103,B107,B112,B113,B119,B120,B128,B13,B16,B17,B18,B24,B28,B41,B42,B64,B72,B74,B77,B81,B85,B86,B9,B90,B93,B94,C11,C38,C47,C48,C51,C54,C60,C67,C68,C69,C70,C8,C84,C87,C9,D5
lof_cds	Chr1	54856250	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	54	A11,A18,A21,A3,A7,A8,B1,B101,B102,B103,B107,B112,B113,B119,B128,B129,B13,B16,B17,B18,B22,B24,B26,B28,B35,B38,B41,B42,B46,B5,B55,B64,B70,B72,B77,B85,B9,B90,B93,B99,C11,C38,C47,C48,C51,C54,C63,C67,C68,C8,C84,C87,C9,D5
lof_cds	Chr1	54856261	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	86	A1,A13,A16,A2,A20,A21,A25,A6,A7,A8,B10,B101,B103,B108,B110,B113,B114,B125,B128,B129,B13,B131,B132,B136,B138,B139,B17,B26,B30,B34,B35,B38,B42,B43,B44,B45,B46,B47,B56,B58,B64,B65,B68,B7,B70,B71,B72,B73,B75,B76,B90,B91,B92,B93,B96,C13,C18,C19,C23,C28,C29,C3,C37,C38,C41,C47,C48,C5,C50,C52,C56,C59,C61,C62,C63,C65,C71,C76,C77,C81,C83,C86,D10,D3,D6,D7
lof_cds	Chr1	54856263	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	53	A11,A21,A3,A7,A8,B1,B101,B102,B103,B107,B112,B113,B117,B119,B128,B129,B13,B16,B17,B22,B24,B26,B28,B35,B38,B41,B42,B46,B5,B55,B64,B70,B72,B77,B85,B9,B90,B93,C11,C38,C47,C48,C51,C54,C63,C65,C67,C68,C8,C84,C87,C9,D5
typical_cds_rare	Chr1	54856345	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	4	B102,B4,B72,B81
typical_cds_rare	Chr1	54856385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	2	B31,B88
typical_cds_rare	Chr1	54856386	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	1	B78
lof_cds	Chr1	54856426	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	3	A11,B38,D2
typical_cds_rare	Chr1	54856426	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	3	A11,B38,D2
lof_cds	Chr1	54856444	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	55	A1,A11,A24,A3,A7,A8,B1,B101,B103,B104,B107,B108,B112,B113,B124,B13,B16,B17,B22,B26,B37,B38,B39,B41,B42,B43,B46,B52,B55,B61,B63,B64,B70,B72,B77,B83,B85,B93,B94,C2,C38,C48,C50,C51,C54,C63,C64,C65,C67,C70,C8,C85,C87,C9,D5
lof_cds	Chr1	54856735	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131010184	SmilChr01G003633	131010184	rna-XM_057937614.1	44	A11,A24,A3,A8,B1,B101,B103,B107,B112,B113,B124,B16,B17,B22,B26,B37,B38,B39,B41,B42,B43,B46,B52,B55,B63,B70,B77,B83,B85,B93,B94,C2,C48,C51,C54,C63,C65,C67,C70,C8,C85,C87,C9,D5