source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	55288856	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B131,C11,C28
typical_cds_rare	Chr1	55288937	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C5
typical_cds_rare	Chr1	55288938	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B125,B90,B92
typical_cds_rare	Chr1	55288964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B102
lof_cds	Chr1	55292401	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	46	A11,A15,B1,B101,B102,B104,B107,B108,B109,B115,B117,B12,B121,B125,B13,B20,B24,B3,B32,B44,B46,B55,B57,B66,B75,B82,B85,B89,B90,B92,B93,C14,C25,C28,C29,C31,C35,C44,C55,C74,C75,C8,C82,C84,D6,D7
typical_cds_rare	Chr1	55292404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
typical_cds_rare	Chr1	55292409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B22,B41
typical_cds_rare	Chr1	55292412	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	A18,B46,C25,C31,C5
lof_cds	Chr1	55292413	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	97	A13,A19,A22,A23,A24,A3,A4,A5,A6,A8,B102,B106,B110,B119,B121,B122,B124,B125,B126,B127,B129,B131,B134,B136,B137,B15,B16,B18,B19,B21,B26,B3,B36,B38,B39,B40,B41,B42,B43,B45,B53,B6,B62,B63,B65,B69,B7,B70,B77,B8,B82,B83,B84,B87,B95,B97,C1,C12,C13,C14,C17,C2,C22,C27,C28,C32,C33,C36,C41,C43,C46,C51,C52,C54,C59,C6,C61,C62,C67,C68,C7,C70,C72,C77,C78,C79,C80,C81,C83,C84,C85,C87,C9,D3,D4,D6,D9
lof_cds	Chr1	55292423	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	C25,C31,C5
typical_cds_rare	Chr1	55292423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	C25,C31,C5
lof_cds	Chr1	55292424	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	17	A11,B10,B114,B135,B136,B137,B138,B54,B58,B79,C3,C39,C51,C86,C9,D1,D8
typical_cds_rare	Chr1	55292437	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	B100,B133,B44,C74
typical_cds_rare	Chr1	55292449	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	B100,B133,B135,B92,C74
typical_cds_rare	Chr1	55292470	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B139,C25
typical_cds_rare	Chr1	55292515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B22,B41,B92
typical_cds_rare	Chr1	55292520	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C84
typical_cds_rare	Chr1	55292522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B22,B41
typical_cds_rare	Chr1	55292523	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B25,C53,D7
typical_cds_rare	Chr1	55292531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	C11,C69,D4
typical_cds_rare	Chr1	55292538	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C84
typical_cds_rare	Chr1	55292548	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	C61,D4
typical_cds_rare	Chr1	55292551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B41
typical_cds_rare	Chr1	55292561	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B79,C39,D1
typical_cds_rare	Chr1	55292582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C84
typical_cds_rare	Chr1	55292593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B33,C14,C83
typical_cds_rare	Chr1	55292609	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	A14,B33,C14,C83
typical_cds_rare	Chr1	55292615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B70,C31,C5
typical_cds_rare	Chr1	55292617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	A7,C58,D5
typical_cds_rare	Chr1	55292650	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	A4,B24
typical_cds_rare	Chr1	55292757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B73,C83
lof_cds	Chr1	55292761	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B58
typical_cds_rare	Chr1	55292761	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B58
typical_cds_rare	Chr1	55292775	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B133
typical_cds_rare	Chr1	55292788	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B104
lof_cds	Chr1	55292792	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	14	A11,B10,B114,B135,B136,B137,B138,B54,B58,C3,C51,C86,C9,D8
lof_cds	Chr1	55292793	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	16	A11,B10,B114,B135,B136,B137,B138,B54,B58,C3,C51,C58,C86,C9,D10,D8
typical_cds_rare	Chr1	55292808	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	B117,B127,B140,B58
lof_cds	Chr1	55292819	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
typical_cds_rare	Chr1	55292819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
lof_cds	Chr1	55292820	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	16	A11,B10,B114,B135,B136,B137,B138,B54,B58,C3,C51,C58,C86,C9,D10,D8
typical_cds_rare	Chr1	55292825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	A11,A15,B32,B66,C35
typical_cds_rare	Chr1	55292840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B73,C83
typical_cds_rare	Chr1	55292842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B73,C83
typical_cds_rare	Chr1	55292845	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	C11,C69
typical_cds_rare	Chr1	55292850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B104,B113
lof_cds	Chr1	55292866	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	B139,C25,C31,C5
typical_cds_rare	Chr1	55292866	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	B139,C25,C31,C5
typical_cds_rare	Chr1	55292872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	A8,B83,C59
typical_cds_rare	Chr1	55292875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	4	C11,C69,D4,D5
lof_cds	Chr1	55292881	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D10
typical_cds_rare	Chr1	55292881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D10
typical_cds_rare	Chr1	55292890	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B84
lof_cds	Chr1	55292893	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	86	A16,A19,A22,A23,A24,A5,A7,A8,B1,B102,B107,B110,B119,B124,B126,B127,B129,B132,B16,B18,B20,B22,B26,B29,B3,B30,B36,B38,B39,B4,B40,B41,B42,B43,B45,B53,B6,B62,B63,B65,B67,B7,B70,B72,B8,B80,B82,B83,B9,B95,B97,B99,C13,C15,C17,C19,C22,C24,C26,C28,C30,C33,C34,C36,C41,C43,C51,C52,C6,C61,C67,C7,C70,C72,C73,C78,C79,C80,C81,C85,C87,C9,D3,D4,D6,D9
typical_cds_rare	Chr1	55292903	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
lof_cds	Chr1	55292905	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	90	A13,A18,A19,A22,A23,A4,A5,A6,A8,B102,B106,B107,B110,B119,B121,B122,B124,B125,B126,B127,B129,B131,B136,B137,B15,B16,B18,B2,B26,B3,B36,B38,B39,B40,B41,B42,B43,B45,B53,B6,B62,B63,B65,B69,B7,B70,B77,B8,B82,B83,B84,B95,B97,C1,C12,C13,C14,C17,C22,C27,C28,C33,C36,C41,C43,C46,C51,C52,C54,C6,C61,C62,C67,C7,C70,C72,C77,C78,C79,C80,C81,C83,C84,C85,C87,C9,D3,D4,D6,D9
typical_cds_rare	Chr1	55292926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	C11,C69
typical_cds_rare	Chr1	55292927	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	A11,A15,B32,B66,C35
lof_cds	Chr1	55292940	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B109
typical_cds_rare	Chr1	55292940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B109
typical_cds_rare	Chr1	55292942	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B113,C11,C69
typical_cds_rare	Chr1	55292949	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B139,C25
typical_cds_rare	Chr1	55292955	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	C11,C69,D4
typical_cds_rare	Chr1	55292976	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C84
typical_cds_rare	Chr1	55292979	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	C58,D10
typical_cds_rare	Chr1	55292982	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	B125,B83,B90,B92,D6
typical_cds_rare	Chr1	55292992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B79,C39,D1
typical_cds_rare	Chr1	55293008	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	3	B139,C25,D10
typical_cds_rare	Chr1	55293011	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C6
typical_cds_rare	Chr1	55293022	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
typical_cds_rare	Chr1	55293030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	5	A11,A15,B32,B66,C35
typical_cds_rare	Chr1	55293031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	D4
typical_cds_rare	Chr1	55293033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	2	B84,D4
typical_cds_rare	Chr1	55293036	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	B13
typical_cds_rare	Chr1	55293060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	1	C44
lof_cds	Chr1	55293068	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131010251	SmilChr01G003692	131010251	rna-XM_057937690.1	110	A11,A13,A15,A16,A18,A19,A3,A4,A6,A7,A8,B1,B10,B106,B107,B114,B124,B127,B129,B131,B132,B134,B135,B136,B137,B138,B15,B16,B18,B19,B20,B21,B22,B26,B29,B3,B30,B32,B38,B39,B4,B45,B53,B54,B58,B65,B66,B67,B69,B7,B70,B72,B73,B77,B79,B80,B83,B84,B87,B9,B95,B99,C11,C12,C13,C15,C17,C2,C24,C26,C27,C3,C30,C32,C33,C34,C35,C36,C41,C43,C46,C51,C52,C54,C58,C59,C6,C61,C62,C68,C69,C70,C72,C73,C77,C78,C79,C80,C81,C83,C85,C86,C87,C9,D1,D10,D3,D4,D6,D8