source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	55353244	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B19,B65,B73
typical_cds_rare	Chr1	55353244	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B19,B65,B73
typical_cds_rare	Chr1	55353256	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B5
typical_cds_rare	Chr1	55353259	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B14
typical_cds_rare	Chr1	55353262	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B67,C50
typical_cds_rare	Chr1	55353282	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	C19,C46
typical_cds_rare	Chr1	55353284	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	C69
typical_cds_rare	Chr1	55353288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B48,B57
typical_cds_rare	Chr1	55353289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B30,B63,B95,C4
typical_cds_rare	Chr1	55353296	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B67,C50
typical_cds_rare	Chr1	55353307	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	C4
typical_cds_rare	Chr1	55353308	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B122,B14,B60
typical_cds_rare	Chr1	55353316	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B130,B139,B56
typical_cds_rare	Chr1	55353323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B130,B139,B56
typical_cds_rare	Chr1	55353340	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B75
lof_cds	Chr1	55353392	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B30,B95
typical_cds_rare	Chr1	55353392	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B30,B95
lof_cds	Chr1	55353396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B27,B42,B51
typical_cds_rare	Chr1	55353396	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B27,B42,B51
typical_cds_rare	Chr1	55353469	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	C35,C9
typical_cds_rare	Chr1	55353475	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	C35,C9
typical_cds_rare	Chr1	55353502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B101
lof_cds	Chr1	55353506	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B119,C9
typical_cds_rare	Chr1	55353506	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B119,C9
typical_cds_rare	Chr1	55353537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	B55,B58,B70,B77,C21
lof_cds	Chr1	55353584	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B136,B74,C38,D7
typical_cds_rare	Chr1	55353584	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B136,B74,C38,D7
typical_cds_rare	Chr1	55353594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B101
typical_cds_rare	Chr1	55353605	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	B133,B19,B48,B53,C28
typical_cds_rare	Chr1	55353606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B122
typical_cds_rare	Chr1	55353610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B112,B42,B89,C8
lof_cds	Chr1	55353680	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	7	B114,B13,B131,B140,B33,C15,C20
lof_cds	Chr1	55353687	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	13	A1,B2,B25,B27,B28,B81,B97,C35,C37,C58,C6,C87,C9
lof_cds	Chr1	55353694	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	A1
typical_cds_rare	Chr1	55353694	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	A1
typical_cds_rare	Chr1	55353696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	A1
typical_cds_rare	Chr1	55353713	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	B31,B69
typical_cds_rare	Chr1	55353750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B37
lof_cds	Chr1	55353762	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	15	A1,A14,A3,B101,B115,B21,B25,B27,B28,B48,B97,C30,C37,C58,C87
typical_cds_rare	Chr1	55353833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	A4
typical_cds_rare	Chr1	55353861	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	C49
typical_cds_rare	Chr1	55353873	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B69
typical_cds_rare	Chr1	55353879	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	A8,B83,B88,C59
typical_cds_rare	Chr1	55353880	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A23,B1,B118,B72,C65
typical_cds_rare	Chr1	55353984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B88
typical_cds_rare	Chr1	55353992	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B140,C2,C52
typical_cds_rare	Chr1	55354015	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A4,B45,B69,B72,C2
typical_cds_rare	Chr1	55354029	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	C2
typical_cds_rare	Chr1	55354063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B72
typical_cds_rare	Chr1	55354149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	A20,A23,B69,C72
typical_cds_rare	Chr1	55354151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	A20,A23,B69,C72
typical_cds_rare	Chr1	55354221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B33
typical_cds_rare	Chr1	55354232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	B123,B69,B91,C32,C45
lof_cds	Chr1	55354239	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	C50,C63,C78
typical_cds_rare	Chr1	55354239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	C50,C63,C78
typical_cds_rare	Chr1	55354252	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	A3,B134,C41,C64
typical_cds_rare	Chr1	55354264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	A8,C38,C45,C55
typical_cds_rare	Chr1	55354284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	A24,B79
lof_cds	Chr1	55354299	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	12	B10,B102,B139,B86,B91,C20,C21,C25,C63,C65,C72,C87
typical_cds_rare	Chr1	55354309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	B34,C24,C83
typical_cds_rare	Chr1	55354310	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B71
typical_cds_rare	Chr1	55354323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	C55
typical_cds_rare	Chr1	55354344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B20,C45,C5,C68
lof_cds	Chr1	55354349	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A5,B15,B2,B29,B99
typical_cds_rare	Chr1	55354349	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A5,B15,B2,B29,B99
lof_cds	Chr1	55354355	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A5,B15,B2,B29,B99
typical_cds_rare	Chr1	55354355	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	5	A5,B15,B2,B29,B99
typical_cds_rare	Chr1	55354360	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B15
lof_cds	Chr1	55354385	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	A5,B23
typical_cds_rare	Chr1	55354385	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	A5,B23
lof_cds	Chr1	55354407	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B35
typical_cds_rare	Chr1	55354407	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B35
typical_cds_rare	Chr1	55354409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	3	A5,B71,B99
lof_cds	Chr1	55354410	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	29	A10,A13,B108,B118,B125,B128,B131,B56,B63,B64,B72,B76,B8,B88,B96,C17,C21,C30,C36,C51,C54,C57,C58,C71,C83,C87,D3,D4,D9
typical_cds_rare	Chr1	55354422	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	1	B71
typical_cds_rare	Chr1	55354477	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	2	C39,C82
typical_cds_rare	Chr1	55354575	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131010270	SmilChr01G003698	131010270	rna-XM_057937725.1	4	B108,B119,B122,B81