source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	55786580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C74
typical_cds_rare	Chr1	55786581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B131
lof_cds	Chr1	55786582	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B130
typical_cds_rare	Chr1	55786582	AC	A	INDEL	1bp_deletion	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B130
typical_cds_rare	Chr1	55786595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	5	B100,B102,B41,C10,C74
typical_cds_rare	Chr1	55786598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	D11,D4,D9
typical_cds_rare	Chr1	55786608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B101,B54,C35
typical_cds_rare	Chr1	55786643	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	5	A1,B112,B67,C59,C81
lof_cds	Chr1	55786663	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	19	A15,A23,A3,A9,B119,B122,B129,B28,B44,B81,B86,B95,B99,C29,C4,C47,C57,C76,C84
lof_cds	Chr1	55786664	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	31	A10,A13,A15,A16,B1,B100,B124,B13,B136,B137,B139,B20,B46,B77,B78,B89,B98,C14,C26,C31,C34,C4,C42,C49,C58,C60,C82,D11,D4,D7,D9
typical_cds_rare	Chr1	55786672	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B5
typical_cds_rare	Chr1	55786721	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	B140,B97,C3,C83
typical_cds_rare	Chr1	55786722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B10
typical_cds_rare	Chr1	55786725	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B54,B86,B97
typical_cds_rare	Chr1	55786730	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B13,B65,C49
lof_cds	Chr1	55786740	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B23
typical_cds_rare	Chr1	55786740	TAG	T	INDEL	2bp_deletion	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B23
typical_cds_rare	Chr1	55786749	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	B16,B36,B5,C40
lof_cds	Chr1	55786752	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	10	A1,B104,B25,B59,B67,B77,C25,C59,C81,D8
typical_cds_rare	Chr1	55786755	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	A25
typical_cds_rare	Chr1	55786772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B104
lof_cds	Chr1	55786774	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	22	A19,B105,B121,B14,B33,B35,B38,B39,B6,B76,B94,C1,C14,C19,C31,C34,C6,C61,C62,C63,C67,C75
lof_cds	Chr1	55786776	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B7,C33,D10
typical_cds_rare	Chr1	55786776	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B7,C33,D10
typical_cds_rare	Chr1	55786777	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	5	B1,B124,B137,C31,C58
lof_cds	Chr1	55786778	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	10	A8,B102,B113,B12,B140,B21,B55,B97,C19,C3
typical_cds_rare	Chr1	55786786	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	5	B120,B32,C5,C52,C87
typical_cds_rare	Chr1	55786799	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	C51,C67
typical_cds_rare	Chr1	55786826	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C26
typical_cds_rare	Chr1	55786836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	B34,D10
typical_cds_rare	Chr1	55786839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C11
typical_cds_rare	Chr1	55786842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B46
typical_cds_rare	Chr1	55786849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B44
typical_cds_rare	Chr1	55786853	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B140
typical_cds_rare	Chr1	55786855	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	C50,C77
lof_cds	Chr1	55786867	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	30	A11,B108,B109,B119,B126,B13,B18,B24,B40,B42,B43,B56,B63,B65,B68,B96,C14,C17,C18,C2,C23,C5,C51,C67,C70,C8,C81,C85,C87,D4
lof_cds	Chr1	55786983	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	13	A10,A18,B2,B28,B79,B82,C18,C37,C73,C86,C87,D4,D5
typical_cds_rare	Chr1	55787001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	B49,B87
lof_cds	Chr1	55787021	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	6	B107,B23,B41,B44,B64,B66
typical_cds_rare	Chr1	55787024	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B41,B44,B7
typical_cds_rare	Chr1	55787025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	A4,B115,B71,B98
typical_cds_rare	Chr1	55787056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	B65,C2
typical_cds_rare	Chr1	55787068	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	A4,B115,B71,B98
lof_cds	Chr1	55787079	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	100	A1,A14,A20,A22,A5,A6,A8,B1,B101,B104,B105,B106,B108,B110,B118,B120,B123,B126,B127,B128,B131,B133,B16,B19,B22,B23,B24,B26,B28,B29,B3,B30,B35,B36,B37,B4,B40,B45,B47,B49,B50,B51,B52,B53,B55,B57,B60,B62,B64,B67,B68,B69,B70,B72,B74,B75,B8,B80,B86,B87,B89,B92,B98,C1,C10,C11,C12,C13,C16,C21,C22,C23,C28,C29,C39,C41,C44,C47,C54,C55,C58,C6,C60,C62,C64,C65,C66,C69,C7,C71,C76,C79,C81,C9,D2,D3,D4,D5,D7,D8
typical_cds_rare	Chr1	55787082	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	C36,D3
lof_cds	Chr1	55787131	C	CCT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B42
typical_cds_rare	Chr1	55787131	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B42
typical_cds_rare	Chr1	55787156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B111
typical_cds_rare	Chr1	55787180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	5	A11,B27,B95,C59,C81
typical_cds_rare	Chr1	55787221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	B65,B88,C64,C66
typical_cds_rare	Chr1	55787242	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	C2,C32,C68
typical_cds_rare	Chr1	55787270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C24
typical_cds_rare	Chr1	55787301	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C27
lof_cds	Chr1	55787305	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B10
typical_cds_rare	Chr1	55787305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B10
lof_cds	Chr1	55787340	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B102
typical_cds_rare	Chr1	55787340	TC	T	INDEL	1bp_deletion	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B102
typical_cds_rare	Chr1	55787376	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	C50
lof_cds	Chr1	55787388	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	C30,D11
typical_cds_rare	Chr1	55787388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	C30,D11
typical_cds_rare	Chr1	55787406	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	A8,B102,B12,B55
typical_cds_rare	Chr1	55787407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	4	A4,B115,B71,B98
typical_cds_rare	Chr1	55787410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B28
typical_cds_rare	Chr1	55787439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	3	B13,B65,C49
typical_cds_rare	Chr1	55787444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B139
typical_cds_rare	Chr1	55787451	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	2	B140,C20
typical_cds_rare	Chr1	55787473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130996708	SmilChr01G003746	130996708	rna-XM_057922020.1	1	B140