source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	58135420	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C51
typical_cds_rare	Chr1	58135420	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C51
lof_cds	Chr1	58135425	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C51
typical_cds_rare	Chr1	58135425	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C51
lof_cds	Chr1	58135426	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	15	B119,B120,B127,B27,B45,B58,B61,B87,C13,C21,C24,C29,C38,C49,C76
typical_cds_rare	Chr1	58135430	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B119,B47,C17,C65
typical_cds_rare	Chr1	58135464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B101,B108,B117,B121
lof_cds	Chr1	58135467	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	B125
typical_cds_rare	Chr1	58135467	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	B125
lof_cds	Chr1	58135471	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	B125
typical_cds_rare	Chr1	58135471	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	B125
lof_cds	Chr1	58135516	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C69
typical_cds_rare	Chr1	58135516	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	C69
lof_cds	Chr1	58135529	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	A5
typical_cds_rare	Chr1	58135529	TG	T	INDEL	1bp_deletion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	A5
typical_cds_rare	Chr1	58135637	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
typical_cds_rare	Chr1	58135669	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
typical_cds_rare	Chr1	58135807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	3	C2,C32,C68
typical_cds_rare	Chr1	58135943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	3	B100,B46,B68
lof_cds	Chr1	58135955	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
typical_cds_rare	Chr1	58135955	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
lof_cds	Chr1	58137203	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	71	A10,A11,A14,A18,A2,A20,A25,A5,A6,A7,A9,B100,B105,B11,B110,B111,B114,B122,B123,B130,B132,B135,B140,B17,B19,B21,B23,B44,B46,B48,B49,B5,B52,B54,B60,B61,B68,B72,B74,B78,B79,B80,B84,B86,B87,B90,B92,B94,B99,C10,C22,C26,C3,C39,C40,C42,C45,C46,C47,C50,C63,C7,C74,C75,C79,C80,C83,D1,D2,D3,D9
lof_cds	Chr1	58137206	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	71	A10,A11,A14,A18,A2,A20,A25,A5,A6,A7,A9,B100,B105,B11,B110,B111,B114,B122,B123,B130,B132,B135,B140,B17,B19,B21,B23,B44,B46,B48,B49,B5,B52,B54,B60,B61,B68,B72,B74,B78,B79,B80,B84,B86,B87,B90,B92,B94,B99,C10,C22,C26,C3,C39,C40,C42,C45,C46,C47,C50,C63,C7,C74,C75,C79,C80,C83,D1,D2,D3,D9
typical_cds_rare	Chr1	58137270	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B112,B133,B29,B4
typical_cds_rare	Chr1	58137352	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	2	C15,C64
typical_cds_rare	Chr1	58137366	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	1	B92
typical_cds_rare	Chr1	58137394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B112,B133,B29,B4
lof_cds	Chr1	58137413	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B112,B133,B29,B4
typical_cds_rare	Chr1	58137413	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	4	B112,B133,B29,B4
lof_cds	Chr1	58137495	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	6	A3,B106,B81,C12,C6,C77
lof_cds	Chr1	58137639	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	59	A18,A23,A3,B106,B110,B111,B119,B120,B123,B125,B128,B134,B14,B15,B21,B27,B28,B32,B34,B36,B41,B45,B58,B59,B6,B61,B65,B79,B8,B81,B82,B83,B87,B89,B94,C13,C15,C21,C22,C24,C28,C29,C36,C38,C39,C44,C49,C57,C58,C59,C6,C62,C64,C66,C7,C72,C76,C77,C86
lof_cds	Chr1	58137642	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	59	A18,A23,A3,B106,B110,B111,B119,B120,B123,B125,B128,B134,B14,B15,B21,B27,B28,B32,B34,B36,B41,B45,B58,B59,B6,B61,B65,B79,B8,B81,B82,B83,B87,B89,B94,C13,C15,C21,C22,C24,C28,C29,C36,C38,C39,C44,C49,C57,C58,C59,C6,C62,C64,C66,C7,C72,C76,C77,C86
typical_cds_rare	Chr1	58137657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	A3,B101,B25,B88,C25
lof_cds	Chr1	58137839	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
typical_cds_rare	Chr1	58137839	AT	A	INDEL	1bp_deletion	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	5	B112,B129,B133,B29,B4
typical_cds_rare	Chr1	58137854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC130998367	SmilChr01G003969	130998367	rna-XM_057923789.1	2	B56,B96