source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	60292006	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A20,B133,B29,B4,C5
typical_cds_rare	Chr1	60292011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B46
lof_cds	Chr1	60292338	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	6	B131,B4,B91,C36,C57,D6
lof_cds	Chr1	60293041	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	B112,B127,B36,B79,C81
typical_cds_rare	Chr1	60293041	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	B112,B127,B36,B79,C81
typical_cds_rare	Chr1	60293069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B30,D3
lof_cds	Chr1	60293153	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A6,B127,B41,C77,C85
typical_cds_rare	Chr1	60293153	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A6,B127,B41,C77,C85
lof_cds	Chr1	60293202	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	A6,B127,B41,C77
typical_cds_rare	Chr1	60293202	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	A6,B127,B41,C77
typical_cds_rare	Chr1	60293220	GC	*	INDEL	1bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B122,B27,B70,C24
lof_cds	Chr1	60293224	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B127,B41,C77,C85
typical_cds_rare	Chr1	60293224	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B127,B41,C77,C85
lof_cds	Chr1	60293229	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	3	B127,B41,C77
typical_cds_rare	Chr1	60293229	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	3	B127,B41,C77
lof_cds	Chr1	60293231	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	56	A1,A19,A21,A22,A9,B102,B103,B108,B112,B12,B121,B123,B130,B138,B16,B18,B23,B32,B34,B38,B39,B40,B42,B45,B55,B66,B68,B7,B72,B73,B79,B86,B87,B9,B92,B96,B97,C1,C13,C16,C19,C3,C33,C39,C44,C5,C51,C55,C61,C67,C7,C70,C75,C83,C84,D10
lof_cds	Chr1	60293234	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	56	A1,A19,A21,A22,A9,B102,B103,B108,B112,B12,B121,B123,B130,B138,B16,B18,B23,B32,B34,B38,B39,B40,B42,B45,B55,B66,B68,B7,B72,B73,B79,B86,B87,B9,B92,B96,B97,C1,C13,C16,C19,C3,C33,C39,C44,C5,C51,C55,C61,C67,C7,C70,C75,C83,C84,D10
lof_cds	Chr1	60293247	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	3	B127,B41,C77
typical_cds_rare	Chr1	60293247	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	3	B127,B41,C77
typical_cds_rare	Chr1	60293282	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	3	B127,B41,C77
lof_cds	Chr1	60293287	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	21	B113,B119,B130,B26,B27,B35,B40,B53,B62,B70,B75,B82,B84,B9,C26,C35,C41,C48,C5,C58,C66
lof_cds	Chr1	60293288	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B127,C77
typical_cds_rare	Chr1	60293288	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B127,C77
lof_cds	Chr1	60293296	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B127,C77
typical_cds_rare	Chr1	60293296	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B127,C77
typical_cds_rare	Chr1	60293299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B127,C77
lof_cds	Chr1	60293330	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	14	B107,B111,B12,B36,B43,B52,B56,B60,B73,B74,B79,C1,C27,D2
typical_cds_rare	Chr1	60293376	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B46
typical_cds_rare	Chr1	60293529	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B2,B66
typical_cds_rare	Chr1	60293530	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A20,B133,B29,B4,C5
lof_cds	Chr1	60293584	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	18	A23,B102,B11,B110,B140,B36,B41,B45,B6,B69,B76,B8,B82,C26,C28,C40,C7,C72
lof_cds	Chr1	60293679	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B92
typical_cds_rare	Chr1	60293679	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B92
typical_cds_rare	Chr1	60293686	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B104,B105,B112,B75
typical_cds_rare	Chr1	60294332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	A3
lof_cds	Chr1	60294352	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	54	A22,A3,B101,B108,B111,B112,B115,B117,B121,B128,B129,B136,B139,B17,B20,B27,B39,B4,B40,B43,B49,B52,B55,B63,B70,B75,B81,B86,B89,B90,B94,B99,C10,C12,C14,C16,C18,C3,C30,C36,C44,C45,C49,C5,C51,C56,C6,C65,C66,C74,C82,C83,D3,D6
lof_cds	Chr1	60294355	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	74	A22,A3,B101,B102,B108,B111,B112,B115,B117,B121,B125,B128,B129,B136,B138,B139,B17,B20,B21,B27,B3,B39,B4,B40,B41,B43,B44,B49,B51,B52,B55,B63,B67,B68,B70,B75,B81,B86,B89,B90,B94,B99,C10,C12,C13,C14,C16,C18,C3,C30,C36,C37,C44,C45,C49,C5,C51,C52,C56,C6,C65,C66,C68,C7,C74,C78,C82,C83,C87,C9,D10,D3,D6,D8
typical_cds_rare	Chr1	60294425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B104,B105,B112,B75
lof_cds	Chr1	60294497	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	244	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A21,A22,A23,A24,A25,A3,A4,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B104,B107,B108,B109,B11,B110,B111,B112,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B46,B47,B48,B49,B5,B50,B51,B53,B54,B55,B56,B57,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr1	60294602	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	253	A1,A10,A11,A13,A14,A15,A16,A18,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr1	60294606	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	253	A1,A10,A11,A13,A14,A15,A16,A18,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	60294645	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B18
typical_cds_rare	Chr1	60294647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B2,B66
typical_cds_rare	Chr1	60294881	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B18
typical_cds_rare	Chr1	60294926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B32,C12
typical_cds_rare	Chr1	60294973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	C85
typical_cds_rare	Chr1	60294989	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B127
typical_cds_rare	Chr1	60295075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B46
typical_cds_rare	Chr1	60295458	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B40,C62
typical_cds_rare	Chr1	60295520	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A18,A21,A6,B66,C32
lof_cds	Chr1	60295598	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B18
typical_cds_rare	Chr1	60295598	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B18
typical_cds_rare	Chr1	60295632	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	C3
lof_cds	Chr1	60295692	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	20	A4,B105,B108,B112,B118,B131,B132,B21,B30,B36,B45,B52,B53,C21,C59,C70,C71,C72,C74,D5
typical_cds_rare	Chr1	60295696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	2	B11,C74
lof_cds	Chr1	60295702	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	19	A4,B105,B108,B118,B131,B132,B2,B21,B30,B36,B45,B52,B53,C33,C46,C59,C72,C74,D5
typical_cds_rare	Chr1	60295807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	B104,B105,B112,B75
typical_cds_rare	Chr1	60295819	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B46
typical_cds_rare	Chr1	60295877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	4	A16,A21,B126,B44
lof_cds	Chr1	60295912	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B68
typical_cds_rare	Chr1	60295912	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	1	B68
typical_cds_rare	Chr1	60295938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131000023	SmilChr01G004186	131000023	rna-XM_057925759.1	5	A18,C34,C71,C73,C86