source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	60663147	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	3	B7,C43,C45
typical_cds_rare	Chr1	60663147	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	3	B7,C43,C45
lof_cds	Chr1	60663158	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	49	A14,A16,A18,A25,A3,B1,B11,B113,B115,B117,B136,B14,B21,B31,B37,B41,B45,B55,B56,B59,B6,B75,B78,B9,B90,B91,B92,B94,B99,C11,C12,C14,C24,C25,C34,C35,C48,C50,C56,C6,C63,C67,C71,C72,C80,C85,C86,D10,D5
lof_cds	Chr1	60663159	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	B15,B84,C20,C82
typical_cds_rare	Chr1	60663159	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	B15,B84,C20,C82
lof_cds	Chr1	60663165	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	B15,B84,C20,C82
typical_cds_rare	Chr1	60663165	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	B15,B84,C20,C82
typical_cds_rare	Chr1	60663191	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	C14
typical_cds_rare	Chr1	60663196	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	3	B23,B94,D7
lof_cds	Chr1	60663234	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	142	A11,A16,A18,A19,A20,A22,A25,A6,A7,B1,B100,B101,B102,B103,B105,B108,B109,B11,B110,B112,B113,B115,B118,B120,B123,B125,B13,B130,B135,B136,B137,B138,B14,B15,B18,B2,B21,B22,B23,B26,B27,B3,B31,B32,B34,B35,B37,B38,B39,B41,B42,B43,B44,B45,B49,B5,B51,B56,B57,B58,B59,B6,B60,B61,B62,B64,B68,B70,B71,B72,B73,B74,B75,B76,B78,B79,B8,B80,B81,B83,B84,B85,B9,B90,B91,B92,B94,B96,B98,C1,C10,C11,C12,C13,C14,C16,C18,C19,C2,C20,C22,C26,C29,C33,C34,C35,C36,C39,C4,C41,C42,C45,C47,C48,C49,C5,C50,C52,C55,C56,C59,C6,C61,C63,C67,C68,C69,C7,C71,C72,C75,C76,C80,C82,C85,C86,C87,C9,D1,D5,D6,D8
lof_cds	Chr1	60663246	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	139	A11,A16,A18,A19,A20,A22,A25,A7,B1,B100,B101,B102,B103,B105,B108,B109,B11,B110,B112,B113,B115,B118,B120,B123,B125,B13,B130,B136,B137,B138,B14,B15,B18,B2,B21,B22,B23,B26,B27,B3,B31,B32,B34,B35,B37,B38,B39,B41,B42,B43,B44,B45,B49,B5,B51,B56,B58,B59,B6,B60,B61,B62,B64,B68,B70,B71,B72,B73,B74,B75,B76,B78,B79,B8,B80,B81,B84,B85,B9,B90,B91,B92,B94,B96,B98,C1,C10,C11,C12,C13,C14,C16,C18,C19,C2,C20,C22,C26,C29,C33,C34,C35,C36,C39,C4,C40,C41,C42,C45,C47,C48,C49,C5,C50,C52,C55,C56,C59,C6,C61,C63,C67,C68,C69,C7,C71,C72,C75,C76,C80,C82,C85,C86,C87,C9,D1,D5,D6,D8
lof_cds	Chr1	60663258	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B101
typical_cds_rare	Chr1	60663258	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B101
lof_cds	Chr1	60663260	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	49	A20,A22,A7,B102,B108,B109,B115,B118,B120,B123,B125,B13,B130,B134,B137,B138,B2,B23,B32,B34,B35,B49,B64,B7,B74,B79,B8,B84,B96,C13,C16,C18,C2,C20,C22,C23,C29,C36,C38,C39,C40,C42,C52,C62,C67,C75,C76,C86,C9
typical_cds_rare	Chr1	60663378	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B139
typical_cds_rare	Chr1	60663428	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	B69,B73
lof_cds	Chr1	60663595	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	126	A10,A13,A14,A24,A25,A6,B1,B100,B102,B103,B105,B106,B11,B110,B113,B115,B117,B121,B123,B124,B127,B128,B131,B133,B135,B136,B14,B16,B17,B18,B19,B20,B21,B22,B24,B25,B26,B28,B3,B31,B33,B34,B39,B40,B41,B42,B43,B45,B47,B48,B5,B51,B52,B59,B6,B60,B61,B64,B65,B66,B69,B71,B72,B75,B77,B81,B83,B85,B86,B87,B89,B9,B90,B92,B94,B97,B98,B99,C1,C10,C11,C12,C15,C19,C21,C26,C27,C28,C29,C33,C34,C35,C37,C42,C44,C45,C46,C5,C50,C53,C55,C56,C57,C58,C6,C61,C62,C63,C64,C66,C67,C69,C70,C74,C76,C78,C79,C8,C80,C83,C87,D1,D3,D6,D7,D8
lof_cds	Chr1	60663619	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	77	A1,A16,A21,A22,A23,A4,A7,B1,B10,B112,B115,B118,B119,B121,B126,B132,B134,B137,B14,B16,B18,B20,B22,B23,B26,B3,B31,B34,B42,B43,B49,B5,B54,B57,B58,B63,B67,B74,B79,B81,B83,B86,B9,B91,B93,C12,C14,C16,C18,C19,C2,C23,C3,C31,C32,C35,C38,C40,C41,C43,C44,C45,C47,C49,C54,C6,C61,C68,C7,C73,C75,C77,C84,C85,C86,D5,D8
lof_cds	Chr1	60663622	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	232	A10,A11,A13,A14,A15,A16,A19,A2,A20,A22,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B113,B114,B115,B117,B118,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B35,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B68,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B86,B87,B88,B89,B9,B90,B91,B92,B94,B95,B96,B97,B98,B99,C1,C10,C11,C12,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C27,C28,C29,C30,C33,C34,C35,C36,C37,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C73,C74,C76,C78,C79,C8,C80,C81,C82,C83,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr1	60663638	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	3	B40,C28,C58
lof_cds	Chr1	60663649	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	19	A15,A18,B10,B102,B104,B125,B130,B51,B52,C10,C21,C30,C36,C51,C59,C63,C70,C83,C9
lof_cds	Chr1	60663651	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	18	A15,B10,B102,B104,B125,B130,B51,B52,C10,C21,C30,C36,C51,C59,C63,C70,C83,C9
lof_cds	Chr1	60663678	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	237	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B107,B11,B110,B111,B112,B113,B114,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B33,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B85,B86,B87,B88,B89,B9,B93,B94,B95,B96,B97,B98,C1,C10,C11,C12,C14,C15,C16,C17,C18,C19,C2,C21,C23,C26,C27,C28,C29,C3,C30,C31,C32,C33,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr1	60663716	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	239	A1,A10,A11,A13,A14,A15,A16,A18,A19,A2,A20,A21,A22,A23,A24,A25,A4,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B107,B108,B11,B110,B111,B112,B113,B114,B117,B118,B119,B12,B120,B121,B122,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B25,B26,B27,B28,B29,B3,B30,B32,B33,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B48,B49,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B85,B86,B87,B88,B89,B9,B93,B94,B95,B96,B97,B98,C1,C10,C11,C12,C14,C15,C16,C17,C18,C19,C2,C21,C23,C26,C27,C28,C29,C3,C30,C31,C32,C33,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C60,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr1	60663719	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	11	A15,A18,B125,B52,C10,C21,C28,C51,C63,C70,C9
lof_cds	Chr1	60663724	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	A16,C14
typical_cds_rare	Chr1	60663724	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	A16,C14
lof_cds	Chr1	60663765	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	91	A1,A13,A15,A16,A18,A20,A22,A24,A4,A5,A7,A8,A9,B1,B10,B104,B107,B112,B115,B118,B119,B121,B123,B126,B133,B134,B137,B14,B140,B15,B16,B17,B18,B20,B22,B23,B26,B34,B35,B4,B46,B47,B49,B51,B52,B58,B64,B68,B69,B73,B74,B76,B80,B86,B93,B95,C13,C14,C16,C17,C18,C2,C20,C23,C25,C28,C31,C38,C40,C41,C43,C44,C51,C53,C54,C58,C63,C65,C70,C71,C73,C75,C81,C82,C84,C86,C9,D11,D2,D7,D9
typical_cds_rare	Chr1	60663795	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	C81
lof_cds	Chr1	60663800	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	34	A16,A18,A3,A5,A6,B10,B104,B108,B120,B122,B125,B133,B138,B2,B24,B30,B33,B51,B52,B84,C13,C14,C20,C24,C28,C32,C33,C39,C43,C51,C53,C63,C66,C70
typical_cds_rare	Chr1	60663803	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	C59
lof_cds	Chr1	60663840	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B127
typical_cds_rare	Chr1	60663840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B127
typical_cds_rare	Chr1	60663857	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	B132,C6
lof_cds	Chr1	60663864	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	142	A10,A11,A13,A14,A18,A25,A6,B100,B101,B102,B103,B105,B11,B110,B112,B113,B119,B12,B120,B123,B127,B128,B131,B132,B135,B136,B139,B14,B16,B17,B19,B20,B21,B25,B28,B3,B30,B31,B33,B34,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B5,B51,B54,B56,B57,B59,B6,B60,B61,B62,B65,B66,B67,B71,B72,B73,B75,B77,B78,B79,B81,B82,B83,B85,B87,B88,B89,B9,B90,B91,B92,B94,B96,B98,C11,C12,C14,C15,C19,C26,C29,C3,C32,C34,C35,C37,C4,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C52,C54,C55,C56,C57,C6,C61,C62,C63,C64,C67,C69,C7,C70,C71,C72,C74,C76,C78,C8,C80,C83,C84,C85,C86,C87,D1,D10,D11,D3,D5,D6,D7,D8,D9
lof_cds	Chr1	60663867	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	145	A1,A16,A19,A20,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B102,B104,B106,B107,B108,B109,B112,B115,B117,B118,B119,B120,B121,B122,B123,B124,B125,B126,B129,B131,B133,B134,B137,B138,B14,B140,B15,B16,B18,B2,B20,B22,B23,B24,B26,B27,B28,B33,B34,B35,B4,B44,B46,B47,B48,B51,B52,B54,B55,B56,B58,B62,B63,B64,B66,B67,B68,B69,B7,B73,B74,B76,B78,B8,B80,B84,B86,B88,B89,B93,B95,B96,B99,C10,C13,C14,C15,C16,C18,C2,C20,C21,C23,C24,C25,C28,C30,C31,C32,C33,C38,C39,C4,C40,C41,C42,C43,C44,C51,C52,C53,C54,C55,C58,C62,C63,C64,C65,C66,C67,C68,C70,C71,C73,C74,C75,C77,C78,C79,C82,C83,C84,C9,D11,D2,D3,D5,D7,D9
lof_cds	Chr1	60663868	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	C81
typical_cds_rare	Chr1	60663868	A	AGG	INDEL	2bp_insertion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	C81
typical_cds_rare	Chr1	60663872	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	B112,B47
lof_cds	Chr1	60663890	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	151	A1,A14,A16,A19,A20,A22,A23,A24,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B102,B104,B106,B107,B108,B109,B112,B115,B117,B118,B119,B121,B122,B123,B124,B125,B126,B129,B131,B132,B133,B134,B135,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B22,B23,B24,B26,B27,B28,B29,B33,B34,B35,B4,B44,B46,B47,B48,B49,B51,B52,B54,B55,B56,B58,B62,B63,B64,B66,B67,B68,B69,B7,B74,B78,B8,B80,B84,B86,B88,B93,B95,B96,B99,C10,C13,C14,C16,C18,C2,C20,C21,C23,C24,C25,C27,C28,C29,C30,C31,C32,C33,C37,C38,C39,C4,C40,C41,C42,C43,C46,C51,C52,C53,C54,C55,C58,C62,C63,C64,C65,C66,C67,C68,C70,C71,C73,C74,C75,C77,C78,C79,C81,C82,C83,C84,C9,D11,D2,D3,D7,D9
typical_cds_rare	Chr1	60663904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	A16,C14
typical_cds_rare	Chr1	60663938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	A16,B44,C14,C81
lof_cds	Chr1	60663944	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	81	A19,A20,A23,A3,A5,A6,A9,B100,B106,B107,B108,B109,B117,B12,B120,B122,B123,B124,B129,B131,B132,B133,B137,B138,B140,B17,B19,B2,B24,B27,B28,B29,B33,B35,B4,B47,B48,B49,B55,B56,B58,B62,B63,B64,B65,B66,B67,B7,B78,B8,B80,B84,B88,B96,B99,C13,C16,C20,C24,C27,C29,C32,C33,C37,C39,C4,C46,C51,C52,C55,C60,C62,C64,C66,C68,C74,C82,C84,D2,D3,D4
lof_cds	Chr1	60663967	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	111	A1,A10,A11,A14,A16,A25,B100,B103,B105,B11,B110,B112,B113,B12,B123,B126,B127,B128,B131,B135,B136,B139,B14,B16,B20,B21,B25,B3,B30,B31,B33,B34,B37,B38,B40,B41,B42,B43,B45,B5,B54,B56,B57,B59,B6,B60,B61,B65,B67,B69,B72,B73,B75,B79,B81,B82,B83,B88,B89,B9,B90,B91,B92,B93,B94,B98,C11,C12,C19,C26,C3,C34,C35,C43,C44,C45,C46,C47,C48,C49,C5,C50,C52,C54,C55,C56,C57,C6,C61,C64,C69,C7,C71,C72,C74,C76,C80,C83,C84,C85,C86,C87,D1,D10,D11,D3,D5,D6,D7,D8,D9
lof_cds	Chr1	60663993	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	71	A14,A19,A20,A23,A3,A5,A6,A7,A9,B100,B106,B107,B108,B109,B117,B12,B120,B122,B124,B129,B13,B132,B133,B137,B138,B140,B17,B2,B24,B27,B28,B29,B30,B35,B4,B47,B48,B55,B56,B62,B66,B67,B7,B78,B8,B80,B84,B88,B96,B99,C13,C15,C16,C20,C24,C29,C32,C33,C37,C39,C4,C42,C46,C62,C64,C65,C66,C68,C82,D3,D4
lof_cds	Chr1	60664002	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	18	B10,B102,B104,B51,B52,C10,C21,C28,C30,C36,C51,C53,C59,C63,C67,C70,C83,C9
lof_cds	Chr1	60664010	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B74
typical_cds_rare	Chr1	60664010	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B74
typical_cds_rare	Chr1	60664043	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	5	A5,B58,B64,C58,D2
lof_cds	Chr1	60664044	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	66	A10,A13,A15,A18,A21,A8,A9,B1,B101,B104,B107,B110,B124,B126,B128,B129,B132,B139,B18,B23,B27,B29,B3,B33,B38,B39,B4,B42,B43,B46,B48,B49,B5,B51,B59,B63,B68,B7,B71,B74,B76,B77,B8,B85,B86,B87,B95,B97,C1,C15,C17,C27,C3,C39,C42,C53,C54,C60,C61,C65,C70,C72,C79,C8,C81,D1
lof_cds	Chr1	60664056	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	235	A1,A10,A11,A14,A16,A19,A2,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B100,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B120,B121,B122,B123,B124,B127,B128,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B26,B28,B29,B3,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B45,B46,B47,B48,B5,B50,B51,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B64,B65,B66,B67,B68,B69,B7,B70,B71,B72,B73,B74,B75,B78,B79,B8,B80,B81,B83,B84,B85,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C28,C29,C3,C30,C31,C32,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C52,C53,C54,C55,C56,C57,C58,C59,C6,C61,C62,C63,C64,C65,C66,C67,C68,C69,C7,C71,C72,C73,C74,C75,C76,C77,C8,C80,C82,C84,C85,C86,C87,C9,D1,D10,D11,D2,D3,D4,D5,D6,D7,D8
lof_cds	Chr1	60664099	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	A21,B122,C22,C4
typical_cds_rare	Chr1	60664099	TTG	T	INDEL	2bp_deletion	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	A21,B122,C22,C4
typical_cds_rare	Chr1	60664116	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	3	A13,B120,B47
typical_cds_rare	Chr1	60664158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B83
typical_cds_rare	Chr1	60664166	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B78
typical_cds_rare	Chr1	60664212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B60
typical_cds_rare	Chr1	60664267	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	B42,B43
typical_cds_rare	Chr1	60664273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	4	B108,B2,B56,B96
typical_cds_rare	Chr1	60664283	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B44
typical_cds_rare	Chr1	60664313	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	1	B45
lof_cds	Chr1	60664410	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	8	A15,A16,B108,B109,B2,C13,C14,C78
typical_cds_rare	Chr1	60664414	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011017	SmilChr01G004228	131011017	rna-XM_057938755.1	2	B138,C28