source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	61098704	C	CTA	INDEL	2bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	11	A19,B1,B121,B122,B16,B48,B79,C23,C71,C84,C85
typical_cds_rare	Chr1	61098740	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B111,B36,B6,B82,C28
typical_cds_rare	Chr1	61098758	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	A14,B50,B59,C33,C73
typical_cds_rare	Chr1	61098777	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B120
lof_cds	Chr1	61098783	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	19	A19,B114,B13,B135,B18,B29,B42,B43,B61,B72,B87,B94,C1,C12,C27,C29,C37,C47,C87
lof_cds	Chr1	61098793	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	12	B13,B24,B27,B42,B6,B87,C22,C35,C42,C57,C63,D5
typical_cds_rare	Chr1	61098804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B59,C73
typical_cds_rare	Chr1	61098806	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	C54,C8
typical_cds_rare	Chr1	61098809	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	C37,D3
lof_cds	Chr1	61098824	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A24,B34,C5
typical_cds_rare	Chr1	61098824	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A24,B34,C5
lof_cds	Chr1	61098847	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B28,B5
typical_cds_rare	Chr1	61098847	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B28,B5
typical_cds_rare	Chr1	61098849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	D10
typical_cds_rare	Chr1	61098858	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B75,C73
lof_cds	Chr1	61098867	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C50
typical_cds_rare	Chr1	61098867	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C50
typical_cds_rare	Chr1	61098876	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B22,B24,B51,C15
lof_cds	Chr1	61098886	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B14
typical_cds_rare	Chr1	61098886	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B14
typical_cds_rare	Chr1	61098918	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	A23,C5
typical_cds_rare	Chr1	61098944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B78,C65
lof_cds	Chr1	61098955	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	7	B111,B36,B45,B82,C28,C31,C75
lof_cds	Chr1	61099005	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	13	A11,A2,B102,B137,B140,B57,B66,B80,B94,C33,C4,C48,C58
typical_cds_rare	Chr1	61099030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C43
typical_cds_rare	Chr1	61099037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B129,B38,B39,C36
typical_cds_rare	Chr1	61099061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B13,C32,C68
typical_cds_rare	Chr1	61099064	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A14,B104,B50
lof_cds	Chr1	61099071	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B42,B43,B70,C58
typical_cds_rare	Chr1	61099071	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B42,B43,B70,C58
typical_cds_rare	Chr1	61099078	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C50
lof_cds	Chr1	61099099	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C26
typical_cds_rare	Chr1	61099099	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C26
typical_cds_rare	Chr1	61099126	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B68,B90,C26
typical_cds_rare	Chr1	61099147	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B114
typical_cds_rare	Chr1	61099153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B68,C74
typical_cds_rare	Chr1	61099173	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B1,B3,C4,C53
typical_cds_rare	Chr1	61099212	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C50
typical_cds_rare	Chr1	61099216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B28,B87
lof_cds	Chr1	61099251	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	7	A1,B27,B42,B43,C30,C34,C59
lof_cds	Chr1	61099268	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B21
typical_cds_rare	Chr1	61099268	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B21
typical_cds_rare	Chr1	61099269	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B126,B2,B24,C76,C83
typical_cds_rare	Chr1	61099295	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B114,B45,C28,C31,C7
typical_cds_rare	Chr1	61099297	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C37
typical_cds_rare	Chr1	61099321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B103,C1
typical_cds_rare	Chr1	61099350	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B67,D4
typical_cds_rare	Chr1	61099360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	C37,D6
lof_cds	Chr1	61099364	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B136,B52,C75
typical_cds_rare	Chr1	61099364	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B136,B52,C75
typical_cds_rare	Chr1	61099369	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	A1
typical_cds_rare	Chr1	61099392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B119,B136,B52,C60,C75
typical_cds_rare	Chr1	61099431	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B13,B31,C42,C59,D5
typical_cds_rare	Chr1	61099599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B3,B35
typical_cds_rare	Chr1	61099636	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B22
lof_cds	Chr1	61099650	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B26,C5
typical_cds_rare	Chr1	61099650	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B26,C5
typical_cds_rare	Chr1	61099668	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B129,B42,B43,B89
typical_cds_rare	Chr1	61099698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B22
typical_cds_rare	Chr1	61099699	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C65
typical_cds_rare	Chr1	61099705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	A22
lof_cds	Chr1	61099740	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B63
typical_cds_rare	Chr1	61099740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B63
typical_cds_rare	Chr1	61099746	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C23
typical_cds_rare	Chr1	61099747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A22,B75,C82
typical_cds_rare	Chr1	61099792	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	A9
lof_cds	Chr1	61099797	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	13	A13,A4,A8,B111,B113,B17,B61,B95,C41,C44,C53,C63,C7
typical_cds_rare	Chr1	61099849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	A21
typical_cds_rare	Chr1	61099869	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B128
typical_cds_rare	Chr1	61099872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A8,B83,C59
typical_cds_rare	Chr1	61099878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B11,C24,C3
typical_cds_rare	Chr1	61099896	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	A21,B115,B124,B20
typical_cds_rare	Chr1	61099898	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B131,B21,B95
typical_cds_rare	Chr1	61099906	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A24,B19,C42
typical_cds_rare	Chr1	61099915	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B24,D5
typical_cds_rare	Chr1	61099928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C3
lof_cds	Chr1	61099929	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A24,B92,C42
typical_cds_rare	Chr1	61099929	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	A24,B92,C42
typical_cds_rare	Chr1	61099934	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	B140,C72
lof_cds	Chr1	61099940	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B1,B122,C36,C37,C60
typical_cds_rare	Chr1	61099940	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	5	B1,B122,C36,C37,C60
typical_cds_rare	Chr1	61099976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B104,B117,B53,B8
typical_cds_rare	Chr1	61099990	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	3	B125,B42,B43
typical_cds_rare	Chr1	61100018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B2,B38,B49,C60
typical_cds_rare	Chr1	61100019	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	4	B109,B125,B4,C36
lof_cds	Chr1	61100047	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B67
typical_cds_rare	Chr1	61100047	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	B67
lof_cds	Chr1	61100064	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	A4,C84
typical_cds_rare	Chr1	61100064	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	2	A4,C84
typical_cds_rare	Chr1	61100076	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	D10
typical_cds_rare	Chr1	61100093	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C52
lof_cds	Chr1	61100120	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	27	B10,B120,B125,B126,B25,B3,B42,B43,B50,B51,B56,B58,B62,B66,B78,B81,B93,C10,C23,C27,C63,C69,C70,C72,C75,C78,C83
lof_cds	Chr1	61100194	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	39	A21,B102,B114,B120,B121,B130,B139,B15,B17,B20,B21,B40,B41,B57,B6,B76,B77,B83,B86,B87,B99,C13,C19,C23,C31,C37,C41,C43,C52,C58,C59,C62,C63,C67,C7,C81,C87,D4,D8
typical_cds_rare	Chr1	61100279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011134	SmilChr01G004290	131011134	rna-XM_057938918.1	1	C23