source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	66539474	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B4
lof_cds	Chr1	66539498	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	18	A10,A15,B118,B128,B24,B29,B40,B45,B52,B61,B76,B8,C12,C27,C30,C52,C62,C77
typical_cds_rare	Chr1	66539614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	2	B125,B92
typical_cds_rare	Chr1	66539645	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	3	B16,B74,C45
typical_cds_rare	Chr1	66539661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B62
lof_cds	Chr1	66539814	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	2	B133,C74
typical_cds_rare	Chr1	66539814	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	2	B133,C74
lof_cds	Chr1	66539824	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	13	A14,B119,B120,B129,B18,B55,C1,C27,C51,C57,C67,C84,D7
typical_cds_rare	Chr1	66539853	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B90
lof_cds	Chr1	66539875	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	146	A1,A10,A11,A14,A16,A18,A19,A2,A20,A23,A25,A4,A8,A9,B10,B100,B102,B104,B106,B109,B110,B113,B114,B117,B119,B12,B120,B122,B124,B125,B126,B127,B129,B130,B131,B134,B135,B136,B139,B140,B18,B19,B2,B21,B22,B24,B27,B28,B29,B3,B31,B32,B33,B36,B38,B39,B4,B41,B43,B45,B46,B47,B48,B49,B5,B50,B55,B56,B6,B61,B62,B64,B65,B66,B71,B73,B76,B78,B79,B8,B80,B84,B90,B91,B92,B93,B96,B98,B99,C1,C10,C11,C13,C16,C18,C2,C20,C21,C23,C25,C26,C27,C29,C30,C31,C32,C33,C35,C36,C37,C40,C44,C46,C47,C50,C51,C53,C54,C55,C56,C57,C58,C6,C60,C62,C65,C67,C68,C69,C7,C71,C72,C75,C80,C84,C85,C86,C9,D1,D11,D2,D3,D4,D6,D7,D9
typical_cds_rare	Chr1	66539899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	5	B122,B41,C11,C26,C69
lof_cds	Chr1	66539912	GAT	G	INDEL	2bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	D1
typical_cds_rare	Chr1	66539912	GAT	G	INDEL	2bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	D1
typical_cds_rare	Chr1	66539940	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	4	B21,B90,B92,C29
typical_cds_rare	Chr1	66539944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	4	B21,B90,B92,C29
typical_cds_rare	Chr1	66539977	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	C29
lof_cds	Chr1	66540139	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	7	B48,B56,B76,C53,C58,C80,D2
typical_cds_rare	Chr1	66540215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	5	A8,B56,C51,C53,D2
lof_cds	Chr1	66540387	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	17	A16,B25,B46,B6,B78,B80,B84,B93,B99,C2,C20,C21,C31,C32,C44,C56,C68
typical_cds_rare	Chr1	66540403	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	2	A23,B45
lof_cds	Chr1	66540408	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B66
typical_cds_rare	Chr1	66540408	CTA	C	INDEL	2bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B66
typical_cds_rare	Chr1	66540436	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	C80
lof_cds	Chr1	66541156	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	14	A11,A20,A23,B126,B31,B45,B47,B6,C10,C18,C54,C7,C72,D1
lof_cds	Chr1	66541159	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B83
typical_cds_rare	Chr1	66541159	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B83
typical_cds_rare	Chr1	66541257	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B66
lof_cds	Chr1	66541359	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	3	B125,B90,B92
typical_cds_rare	Chr1	66541359	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	3	B125,B90,B92
lof_cds	Chr1	66541362	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	12	A2,B100,B117,B135,B3,B48,B56,B76,C53,C58,C80,D2
typical_cds_rare	Chr1	66541367	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	C50
typical_cds_rare	Chr1	66541415	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	5	B128,B24,C27,C30,C52
lof_cds	Chr1	66541692	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	42	A11,A20,A23,A25,A8,B108,B110,B111,B122,B126,B132,B140,B19,B28,B31,B36,B45,B47,B5,B57,B6,B62,B91,C10,C16,C18,C23,C26,C35,C46,C54,C57,C6,C65,C7,C72,C9,D1,D4,D6,D7,D9
typical_cds_rare	Chr1	66541733	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	D11
typical_cds_rare	Chr1	66541760	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B17
lof_cds	Chr1	66541954	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B15
typical_cds_rare	Chr1	66541954	GTA	G	INDEL	2bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B15
typical_cds_rare	Chr1	66542015	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	C5
lof_cds	Chr1	66542020	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B129
typical_cds_rare	Chr1	66542020	C	CGG	INDEL	2bp_insertion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	1	B129
lof_cds	Chr1	66542098	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	4	B79,B98,C50,D11
typical_cds_rare	Chr1	66542098	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131005178	SmilChr01G004841	131005178	rna-XM_057932010.1,rna-XM_057932011.1	4	B79,B98,C50,D11