source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	67606556	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	33	A3,A5,A9,B1,B101,B129,B130,B133,B17,B18,B39,B46,B47,B49,B5,B56,B72,B82,B95,B96,C13,C22,C28,C32,C35,C48,C64,C68,C79,C82,C87,D3,D7
lof_cds	Chr1	67606557	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	59	A14,A3,A5,B10,B106,B108,B111,B115,B122,B126,B128,B137,B24,B28,B32,B34,B37,B44,B46,B50,B59,B6,B63,B66,B67,B76,B8,B86,B87,B88,B95,C1,C10,C14,C18,C19,C20,C23,C24,C29,C34,C37,C49,C50,C54,C59,C62,C63,C81,C83,C84,C85,C87,D11,D2,D4,D5,D6,D8
lof_cds	Chr1	67606567	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	D11
typical_cds_rare	Chr1	67606567	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	D11
lof_cds	Chr1	67606568	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	37	A1,A16,A8,B10,B106,B112,B127,B134,B137,B14,B18,B3,B30,B32,B44,B50,B61,B75,B79,B81,B85,B86,B93,B94,B98,C19,C2,C33,C35,C39,C48,C50,C56,C63,C65,C67,C82
lof_cds	Chr1	67606571	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	72	A10,A13,A14,A22,B101,B105,B108,B109,B111,B113,B115,B117,B12,B125,B129,B133,B134,B135,B136,B137,B14,B140,B17,B20,B23,B25,B29,B34,B37,B41,B44,B48,B6,B63,B72,B73,B76,B77,B78,B83,B84,B87,B94,C1,C11,C15,C2,C20,C23,C26,C3,C30,C31,C38,C39,C43,C46,C48,C58,C71,C79,C80,C86,C9,D1,D10,D2,D3,D4,D5,D6,D9
lof_cds	Chr1	67606578	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	10	A2,A21,A8,B23,B33,B40,B88,C16,C62,C65
lof_cds	Chr1	67606581	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	3	B118,B90,C52
typical_cds_rare	Chr1	67606581	A	ACT	INDEL	2bp_insertion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	3	B118,B90,C52
lof_cds	Chr1	67606583	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	10	A2,A21,A8,B23,B33,B40,B88,C16,C62,C65
lof_cds	Chr1	67606588	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B24,B66
typical_cds_rare	Chr1	67606588	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B24,B66
lof_cds	Chr1	67606591	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	3	B8,C31,C58
typical_cds_rare	Chr1	67606591	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	3	B8,C31,C58
lof_cds	Chr1	67606607	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	65	A11,A18,A19,A20,A24,A25,A4,A6,A7,B100,B103,B11,B120,B127,B131,B135,B15,B19,B27,B3,B35,B42,B43,B45,B51,B55,B57,B62,B64,B68,B69,B78,B84,B89,B9,B90,B91,B99,C12,C16,C21,C23,C25,C26,C32,C36,C4,C42,C43,C44,C45,C51,C57,C6,C60,C68,C7,C71,C76,C79,C84,D1,D11,D7,D8
lof_cds	Chr1	67606646	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	56	A11,A18,A19,A20,A24,A25,A6,A7,B100,B103,B11,B119,B120,B127,B135,B15,B19,B20,B35,B4,B42,B43,B51,B55,B57,B6,B69,B70,B78,B84,B86,B89,B92,C1,C12,C21,C23,C26,C31,C36,C4,C42,C43,C44,C45,C57,C6,C68,C7,C71,C72,C76,C79,C84,D7,D8
typical_cds_rare	Chr1	67606683	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B24
typical_cds_rare	Chr1	67606688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B24
typical_cds_rare	Chr1	67606691	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B73,C46
lof_cds	Chr1	67606705	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	27	A15,B1,B108,B13,B133,B140,B37,B39,B5,B50,B56,B73,B82,B96,C17,C3,C36,C38,C39,C53,C55,C58,C61,C69,C71,D6,D9
lof_cds	Chr1	67606708	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	27	A15,B1,B108,B13,B133,B140,B37,B39,B5,B50,B56,B73,B82,B96,C17,C3,C36,C38,C39,C53,C55,C58,C61,C69,C71,D6,D9
lof_cds	Chr1	67606711	G	GT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	C46
typical_cds_rare	Chr1	67606711	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	C46
lof_cds	Chr1	67606787	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	21	A3,B1,B33,B50,B59,B65,B66,B72,B73,B96,C10,C3,C31,C36,C47,C55,C68,C72,D1,D3,D5
typical_cds_rare	Chr1	67606794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	A25,B11,B45,C72
typical_cds_rare	Chr1	67606795	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B100
typical_cds_rare	Chr1	67606803	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B31
typical_cds_rare	Chr1	67612565	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B5
typical_cds_rare	Chr1	67613359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B43,C55
lof_cds	Chr1	67613694	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B104
typical_cds_rare	Chr1	67613694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B104
typical_cds_rare	Chr1	67613921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B38
typical_cds_rare	Chr1	67613943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	5	B117,B21,B44,C53,C72
typical_cds_rare	Chr1	67613994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	5	A1,B117,B44,C72,C76
typical_cds_rare	Chr1	67614003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	5	A1,B117,B44,C72,C76
typical_cds_rare	Chr1	67614601	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B104
typical_cds_rare	Chr1	67614640	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B104
typical_cds_rare	Chr1	67614794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B96
lof_cds	Chr1	67614821	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	5	B31,B38,B44,C60,D4
typical_cds_rare	Chr1	67614821	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	5	B31,B38,B44,C60,D4
typical_cds_rare	Chr1	67614844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B131,C34
typical_cds_rare	Chr1	67614863	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B30,C67
lof_cds	Chr1	67614872	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B33
typical_cds_rare	Chr1	67614872	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B33
typical_cds_rare	Chr1	67614888	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	A15,A5,C22,C43
typical_cds_rare	Chr1	67614963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	B133,B91,C23,C3
typical_cds_rare	Chr1	67614985	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	B131,B47,C61,C84
typical_cds_rare	Chr1	67615018	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B46
typical_cds_rare	Chr1	67615030	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B65,C14
typical_cds_rare	Chr1	67615060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B50,C74
typical_cds_rare	Chr1	67615132	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B38
typical_cds_rare	Chr1	67615157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	1	B15
typical_cds_rare	Chr1	67615390	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	2	B81,C49
typical_cds_rare	Chr1	67615443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	B81,C49,C65,C82
typical_cds_rare	Chr1	67615459	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011947	SmilChr01G004953	131011947	rna-XM_057939850.1	4	B81,C49,C65,C82