source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	68628136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	C33
typical_cds_rare	Chr1	68628312	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B130
typical_cds_rare	Chr1	68628362	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	4	B114,B74,C38,C59
lof_cds	Chr1	68628566	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B41
typical_cds_rare	Chr1	68628566	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B41
typical_cds_rare	Chr1	68628611	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	4	A3,B26,C40,C71
typical_cds_rare	Chr1	68628658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B140
typical_cds_rare	Chr1	68628949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B23
typical_cds_rare	Chr1	68628957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	3	B72,C66,C9
lof_cds	Chr1	68629008	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	139	A1,A13,A18,A20,A22,A24,A7,A8,B1,B10,B100,B102,B105,B107,B108,B109,B111,B112,B113,B115,B118,B120,B122,B124,B125,B13,B130,B131,B134,B137,B139,B140,B15,B16,B17,B18,B19,B21,B23,B26,B28,B29,B3,B30,B32,B34,B36,B37,B38,B39,B4,B41,B43,B45,B47,B48,B50,B51,B54,B55,B57,B59,B6,B60,B61,B64,B65,B66,B67,B68,B71,B74,B75,B77,B78,B79,B80,B81,B82,B84,B85,B86,B90,B92,B93,B94,B95,B97,B99,C1,C11,C15,C16,C17,C18,C19,C2,C20,C21,C24,C25,C26,C32,C33,C35,C36,C37,C44,C45,C46,C47,C48,C49,C5,C52,C53,C54,C55,C62,C63,C65,C67,C68,C70,C71,C72,C73,C75,C76,C80,C84,D1,D2,D3,D4,D5,D6,D7,D8
lof_cds	Chr1	68629011	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	22	A10,A5,B108,B11,B114,B121,B127,B40,B44,B63,B69,B72,C28,C31,C38,C59,C60,C66,C85,C86,C9,D2
lof_cds	Chr1	68629013	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	120	A10,A11,A13,A14,A15,A16,A20,A21,A22,A23,A25,A5,A9,B1,B10,B101,B107,B108,B11,B110,B111,B112,B113,B114,B115,B118,B121,B123,B125,B126,B127,B128,B130,B135,B137,B138,B139,B16,B21,B22,B23,B28,B33,B34,B37,B38,B39,B4,B40,B44,B45,B46,B48,B51,B55,B56,B60,B61,B62,B63,B66,B67,B69,B72,B74,B76,B79,B84,B85,B87,B88,B89,B9,B90,B92,B93,B95,B98,C1,C10,C11,C14,C19,C2,C24,C27,C28,C29,C3,C31,C32,C34,C35,C38,C41,C42,C46,C50,C52,C53,C57,C59,C6,C60,C68,C72,C73,C74,C77,C80,C81,C85,C86,C87,C9,D1,D2,D7,D8,D9
typical_cds_rare	Chr1	68629023	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	4	B115,B20,C58,C85
typical_cds_rare	Chr1	68629392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	2	B112,C38
typical_cds_rare	Chr1	68629404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	3	B79,B83,C38
typical_cds_rare	Chr1	68629457	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	3	B47,B92,C76
typical_cds_rare	Chr1	68629471	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	3	A10,B129,B65
lof_cds	Chr1	68629538	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B81
typical_cds_rare	Chr1	68629538	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	1	B81
typical_cds_rare	Chr1	68629645	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932350.1	4	A3,B26,C40,C71
typical_cds_rare	Chr1	68630226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932348.1,rna-XM_057932349.1	1	C15
typical_cds_rare	Chr1	68630439	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1,rna-XM_057932350.1	2	A10,A11
lof_cds	Chr1	68630619	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	7	A20,A6,B124,B45,C6,C79,D3
lof_cds	Chr1	68630645	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	19	A23,A3,A7,B131,B140,B41,B42,B43,B68,B80,B81,B86,B9,B99,C25,C3,C39,C40,C8
lof_cds	Chr1	68630651	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	19	A23,A3,A7,B131,B140,B41,B42,B43,B68,B80,B81,B86,B9,B99,C25,C3,C39,C40,C8
lof_cds	Chr1	68630654	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	62	A18,A19,A5,A9,B100,B106,B109,B111,B112,B113,B114,B115,B118,B121,B13,B134,B18,B19,B20,B21,B28,B3,B40,B42,B43,B44,B47,B49,B57,B59,B6,B60,B66,B82,B90,B92,B95,B99,C11,C15,C20,C24,C26,C31,C33,C36,C44,C45,C46,C48,C53,C64,C66,C67,C69,C74,C76,C80,C85,C86,C87,D7
lof_cds	Chr1	68630657	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	20	A23,A3,A7,B131,B140,B41,B42,B43,B68,B80,B81,B86,B9,B99,C25,C3,C39,C40,C78,C8
lof_cds	Chr1	68630658	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932345.1,rna-XM_057932346.1,rna-XM_057932347.1	20	A23,A3,A7,B131,B140,B41,B42,B43,B68,B80,B81,B86,B9,B99,C25,C3,C39,C40,C78,C8
typical_cds_rare	Chr1	68654826	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	1	C26
typical_cds_rare	Chr1	68654848	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B83,C38
typical_cds_rare	Chr1	68654999	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B83,C38
typical_cds_rare	Chr1	68655283	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B13,B70
typical_cds_rare	Chr1	68655300	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	4	A11,B105,B2,D10
typical_cds_rare	Chr1	68655327	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	4	A3,B26,C40,C71
typical_cds_rare	Chr1	68655374	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B140,D1
typical_cds_rare	Chr1	68655622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B83,C38
lof_cds	Chr1	68655723	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	183	A1,A10,A14,A16,A18,A2,A20,A21,A22,A23,A24,A3,A5,A8,A9,B1,B10,B100,B103,B107,B108,B109,B11,B111,B112,B113,B114,B115,B119,B120,B121,B122,B123,B125,B126,B127,B129,B13,B131,B133,B135,B137,B138,B139,B140,B16,B17,B18,B19,B2,B20,B21,B23,B24,B26,B27,B28,B29,B30,B31,B32,B34,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B46,B47,B5,B51,B55,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B66,B68,B69,B71,B72,B74,B75,B77,B78,B79,B80,B81,B82,B83,B84,B85,B86,B87,B88,B9,B90,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C11,C13,C15,C16,C18,C19,C2,C20,C21,C23,C25,C26,C28,C29,C30,C31,C32,C33,C35,C36,C37,C38,C40,C42,C44,C45,C46,C47,C48,C49,C5,C51,C52,C54,C57,C59,C6,C60,C62,C63,C65,C67,C68,C69,C7,C70,C71,C72,C74,C76,C8,C80,C82,C84,C85,C86,C9,D10,D3,D4,D5,D6,D7,D9
lof_cds	Chr1	68655731	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	75	A1,A2,A22,A23,A3,B1,B109,B111,B112,B113,B119,B120,B129,B131,B133,B137,B138,B139,B140,B19,B2,B20,B21,B27,B28,B30,B31,B38,B39,B4,B41,B42,B45,B5,B60,B63,B65,B66,B71,B74,B80,B81,B82,B86,B87,B88,B9,B90,B91,B92,B94,B95,B96,B99,C1,C11,C13,C15,C18,C21,C29,C30,C36,C57,C59,C68,C69,C7,C70,C8,C82,C84,C85,D10,D4
lof_cds	Chr1	68655876	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	32	A24,B114,B124,B133,B138,B27,B31,B36,B40,B44,B46,B64,B69,B77,B78,B86,B9,B91,B96,C13,C20,C29,C30,C31,C49,C57,C59,C62,C85,C9,D11,D7
lof_cds	Chr1	68655881	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	32	A24,B114,B124,B133,B138,B27,B31,B36,B40,B44,B46,B64,B69,B77,B78,B86,B9,B91,B96,C13,C20,C29,C30,C31,C49,C57,C59,C62,C85,C9,D11,D7
lof_cds	Chr1	68655925	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	5	B75,C33,C51,C60,D4
typical_cds_rare	Chr1	68655925	A	ACC	INDEL	2bp_insertion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	5	B75,C33,C51,C60,D4
lof_cds	Chr1	68655927	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B1,C26
typical_cds_rare	Chr1	68655927	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B1,C26
lof_cds	Chr1	68655946	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	100	A11,A13,A15,A19,A2,A20,A21,A22,A7,B1,B10,B101,B103,B104,B105,B106,B110,B111,B112,B113,B115,B117,B119,B124,B125,B128,B137,B138,B139,B140,B16,B2,B20,B21,B22,B25,B28,B33,B34,B38,B39,B45,B49,B51,B52,B56,B60,B61,B66,B67,B7,B76,B8,B85,B87,B89,B90,B91,B92,B94,B95,B96,C1,C10,C11,C13,C14,C15,C18,C19,C2,C21,C24,C27,C3,C34,C4,C41,C46,C50,C53,C57,C58,C64,C66,C69,C7,C72,C74,C8,C81,C82,C85,D1,D10,D11,D3,D4,D6,D8
typical_cds_rare	Chr1	68656115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	3	B112,C37,C38
typical_cds_rare	Chr1	68656169	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	1	D10
typical_cds_rare	Chr1	68656179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	1	B140
typical_cds_rare	Chr1	68656180	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	4	B13,B81,B90,C76
typical_cds_rare	Chr1	68656194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	4	A10,B123,B129,B65
typical_cds_rare	Chr1	68656354	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	2	B94,C16
typical_cds_rare	Chr1	68656368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1,rna-XM_057932352.1	1	B140
typical_cds_rare	Chr1	68656931	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1	1	B140
lof_cds	Chr1	68656936	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1	5	A11,B105,B2,C4,D10
typical_cds_rare	Chr1	68656936	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1	5	A11,B105,B2,C4,D10
lof_cds	Chr1	68656960	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932351.1	54	A11,A13,A15,A21,A6,A7,B101,B104,B106,B110,B112,B113,B117,B120,B128,B135,B137,B138,B16,B21,B22,B28,B33,B34,B49,B56,B61,B67,B76,B87,B88,B89,B9,B95,B96,C1,C10,C14,C22,C24,C27,C34,C41,C47,C50,C53,C7,C72,C73,C74,C79,C81,D1,D8
typical_cds_rare	Chr1	68657061	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932351.1	1	C39
typical_cds_rare	Chr1	68657063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1,rna-XM_057932351.1	1	B36
lof_cds	Chr1	68657103	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	16	B122,B134,B28,B4,B42,B99,C26,C31,C36,C44,C46,C53,C67,C80,C86,C87
lof_cds	Chr1	68657115	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	1	C8
typical_cds_rare	Chr1	68657115	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	1	C8
typical_cds_rare	Chr1	68657130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	5	B121,B50,C49,C87,D9
typical_cds_rare	Chr1	68657158	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	3	A11,B123,B65
typical_cds_rare	Chr1	68657260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005388	SmilChr01G005075	131005388	rna-XM_057932348.1,rna-XM_057932349.1	4	A3,B26,C40,C71