source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	73060530	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	B108,C2,C23,C65
typical_cds_rare	Chr1	73060530	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	B108,C2,C23,C65
lof_cds	Chr1	73060545	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	51	A15,A19,A20,A22,A23,A8,B100,B103,B104,B105,B110,B123,B138,B18,B24,B31,B33,B34,B42,B6,B63,B65,B78,B79,B85,B89,B9,B94,B96,B97,C11,C13,C15,C32,C37,C38,C45,C46,C5,C51,C52,C53,C6,C61,C63,C64,C66,C67,C68,C69,D8
lof_cds	Chr1	73060548	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	A15,B63,C11,C69
typical_cds_rare	Chr1	73060548	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	A15,B63,C11,C69
typical_cds_rare	Chr1	73060554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	B108,C2,C23,C65
lof_cds	Chr1	73060559	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	B108,C2,C23,C65
typical_cds_rare	Chr1	73060559	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	4	B108,C2,C23,C65
lof_cds	Chr1	73060565	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	1	B94
typical_cds_rare	Chr1	73060565	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	1	B94
lof_cds	Chr1	73060570	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933097.1	42	A20,A22,A23,A8,B100,B103,B104,B105,B110,B123,B18,B24,B31,B33,B34,B42,B6,B78,B79,B85,B89,B9,B96,B97,C13,C15,C37,C38,C45,C46,C5,C51,C52,C53,C6,C61,C63,C64,C66,C67,D10,D8
lof_cds	Chr1	73060658	C	CAG	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	5	A15,B107,C11,C69,D10
typical_cds_rare	Chr1	73060658	C	CAG	INDEL	2bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	5	A15,B107,C11,C69,D10
lof_cds	Chr1	73060660	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	59	A1,A10,A11,A15,A18,A19,A3,A5,A7,B107,B111,B112,B129,B134,B140,B15,B17,B21,B23,B26,B47,B48,B52,B53,B58,B61,B68,B7,B73,B75,B81,B84,B86,B90,B91,B93,C1,C10,C20,C24,C26,C30,C31,C35,C36,C37,C41,C42,C58,C59,C60,C7,C78,C83,C85,C9,D1,D2,D9
typical_cds_rare	Chr1	73060716	AG	*	INDEL	1bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	2	A13,B130
lof_cds	Chr1	73060718	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	3	A19,B75,D10
typical_cds_rare	Chr1	73060718	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	3	A19,B75,D10
typical_cds_rare	Chr1	73060725	TCC	*	INDEL	2bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1	4	A13,A19,B130,B75
lof_cds	Chr1	73060901	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	20	A19,A22,B119,B2,B34,B69,B75,B87,B9,C3,C40,C44,C47,C49,C50,C52,C56,C63,C65,C71
lof_cds	Chr1	73060904	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	12	B11,B128,B132,B27,B64,B65,B75,B76,C12,C19,C54,C71
lof_cds	Chr1	73060907	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	20	A19,A22,B119,B131,B133,B34,B69,B87,B9,C3,C40,C44,C47,C49,C50,C52,C56,C63,C65,C78
typical_cds_rare	Chr1	73060915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	C23,C65
typical_cds_rare	Chr1	73061002	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B104
typical_cds_rare	Chr1	73061012	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B94
typical_cds_rare	Chr1	73061026	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	A13,B130
lof_cds	Chr1	73061116	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	54	A19,A20,A22,A23,A8,B100,B103,B104,B105,B113,B123,B138,B18,B22,B24,B31,B33,B34,B42,B43,B53,B56,B6,B67,B76,B78,B79,B85,B89,B9,B94,B96,B97,C13,C15,C32,C37,C38,C42,C45,C46,C5,C51,C52,C53,C6,C61,C63,C64,C66,C67,C68,C73,D8
lof_cds	Chr1	73061131	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	41	A13,A14,A21,B106,B11,B119,B126,B128,B130,B131,B132,B133,B2,B30,B38,B39,B41,B45,B5,B50,B65,B75,C14,C22,C24,C27,C3,C33,C49,C54,C65,C70,C72,C74,C76,C77,C78,C79,C81,C9,D4
lof_cds	Chr1	73061133	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	48	A13,A14,A15,A21,A25,B106,B109,B11,B110,B119,B122,B126,B128,B130,B131,B132,B133,B2,B27,B30,B38,B39,B41,B45,B5,B50,B63,B65,B75,C14,C22,C24,C27,C3,C33,C49,C54,C65,C70,C72,C74,C76,C77,C78,C79,C81,C9,D4
lof_cds	Chr1	73061152	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	47	A13,A14,A21,A9,B106,B107,B11,B110,B119,B126,B128,B130,B131,B132,B133,B2,B30,B38,B39,B41,B45,B5,B50,B60,B65,B73,C14,C2,C22,C23,C24,C27,C29,C3,C33,C49,C65,C70,C72,C74,C76,C77,C78,C79,C81,C9,D4
lof_cds	Chr1	73061169	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	4	B108,C2,C23,C65
typical_cds_rare	Chr1	73061169	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	4	B108,C2,C23,C65
typical_cds_rare	Chr1	73061194	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	A13,B130
lof_cds	Chr1	73061248	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	B2,B94
typical_cds_rare	Chr1	73061248	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	B2,B94
typical_cds_rare	Chr1	73061253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	2	A13,B130
lof_cds	Chr1	73061441	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B61
typical_cds_rare	Chr1	73061441	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B61
lof_cds	Chr1	73061477	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B5
typical_cds_rare	Chr1	73061477	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B5
lof_cds	Chr1	73061497	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	9	A13,B30,B49,B55,B71,B77,B79,B87,C62
typical_cds_rare	Chr1	73061538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	3	B104,B109,B122
lof_cds	Chr1	73061554	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	8	B115,B20,B22,B58,B70,B77,C18,C87
typical_cds_rare	Chr1	73061575	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B104
lof_cds	Chr1	73061596	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B94
typical_cds_rare	Chr1	73061596	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B94
lof_cds	Chr1	73061600	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	9	A13,B12,B30,B49,B55,B71,B79,B87,C62
lof_cds	Chr1	73061601	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	32	A13,A14,A21,B104,B106,B119,B128,B130,B131,B133,B30,B41,B45,B5,B50,B63,B97,C13,C14,C24,C33,C49,C70,C72,C74,C76,C77,C78,C79,C81,C9,D4
lof_cds	Chr1	73061621	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	30	A20,A22,A23,A8,B100,B105,B110,B123,B138,B18,B31,B34,B6,B67,B85,C15,C32,C38,C46,C5,C52,C53,C63,C64,C66,C67,C68,C73,D10,D8
lof_cds	Chr1	73061664	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	A25
typical_cds_rare	Chr1	73061664	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	A25
typical_cds_rare	Chr1	73061669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	1	B104
lof_cds	Chr1	73061701	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	3	B3,B72,B8
typical_cds_rare	Chr1	73061701	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	3	B3,B72,B8
lof_cds	Chr1	73061780	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	4	B128,B45,B63,C81
typical_cds_rare	Chr1	73061780	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131005965	SmilChr01G005679	131005965	rna-XM_057933096.1,rna-XM_057933097.1	4	B128,B45,B63,C81