source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	73086428	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	79	A14,A2,A23,A24,A5,A9,B101,B102,B104,B105,B111,B112,B118,B120,B124,B138,B139,B14,B140,B15,B18,B19,B27,B28,B29,B3,B32,B33,B42,B43,B47,B48,B49,B52,B53,B54,B57,B60,B61,B64,B71,B72,B82,B83,B85,B86,B87,B89,B92,B95,B98,B99,C16,C20,C25,C31,C32,C36,C42,C45,C46,C54,C55,C57,C58,C60,C61,C63,C68,C72,C73,C78,C82,C84,D1,D10,D5,D6,D9
typical_cds_rare	Chr1	73086433	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B140,C82
lof_cds	Chr1	73086434	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	143	A10,A11,A13,A14,A16,A19,A20,A21,A22,A23,A5,A7,A9,B100,B102,B104,B107,B108,B110,B118,B119,B12,B121,B125,B127,B13,B131,B135,B137,B14,B15,B16,B2,B20,B22,B23,B24,B26,B28,B29,B30,B32,B33,B34,B35,B37,B40,B41,B42,B43,B44,B45,B46,B47,B49,B5,B50,B51,B55,B56,B57,B58,B6,B62,B63,B64,B65,B67,B7,B70,B71,B73,B76,B77,B79,B80,B81,B82,B83,B86,B87,B88,B89,B9,B90,B91,B92,B94,B96,B98,C1,C11,C13,C14,C15,C20,C21,C23,C26,C27,C29,C3,C33,C35,C36,C37,C38,C4,C40,C45,C49,C5,C50,C51,C52,C56,C58,C59,C6,C60,C61,C62,C63,C65,C67,C69,C70,C71,C72,C74,C76,C78,C8,C81,C83,C84,C85,C87,C9,D1,D11,D3,D8
lof_cds	Chr1	73086436	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	169	A1,A10,A11,A14,A15,A16,A18,A2,A20,A23,A24,A4,A5,A6,A8,A9,B100,B101,B102,B103,B104,B105,B106,B108,B109,B110,B111,B112,B113,B118,B12,B120,B121,B122,B123,B124,B125,B127,B13,B130,B132,B133,B134,B135,B136,B137,B138,B139,B14,B140,B15,B18,B19,B22,B24,B25,B27,B28,B29,B3,B32,B33,B35,B36,B37,B39,B4,B41,B42,B43,B44,B47,B48,B49,B5,B51,B52,B53,B54,B56,B57,B58,B59,B60,B61,B62,B64,B69,B70,B71,B72,B74,B75,B8,B82,B83,B84,B85,B86,B87,B88,B89,B90,B91,B92,B95,B96,B97,B98,B99,C1,C11,C12,C14,C15,C16,C17,C20,C21,C25,C26,C28,C31,C32,C34,C36,C37,C38,C41,C42,C45,C46,C47,C51,C53,C54,C55,C57,C58,C59,C60,C61,C63,C64,C66,C67,C68,C69,C70,C71,C73,C75,C77,C78,C79,C80,C82,C83,C84,C86,C87,C9,D1,D10,D3,D4,D5,D6,D9
lof_cds	Chr1	73086447	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B140,B70,C82
typical_cds_rare	Chr1	73086447	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B140,B70,C82
lof_cds	Chr1	73086460	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	26	A1,A18,A20,A6,B102,B118,B134,B18,B21,B28,B32,B37,B51,B60,B72,B86,C1,C14,C26,C28,C38,C47,C79,C84,C9,D3
lof_cds	Chr1	73086463	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	133	A10,A11,A14,A15,A16,A18,A2,A20,A21,A24,A4,A5,A6,A9,B100,B101,B103,B105,B106,B108,B109,B110,B113,B118,B119,B12,B120,B121,B122,B123,B124,B125,B127,B13,B130,B132,B136,B137,B138,B139,B140,B15,B22,B24,B25,B27,B29,B3,B30,B31,B33,B35,B36,B37,B39,B4,B42,B43,B44,B45,B49,B5,B50,B51,B53,B55,B56,B58,B59,B61,B62,B63,B64,B69,B74,B8,B83,B84,B85,B87,B88,B89,B90,B91,B92,B95,B96,B97,B98,C12,C13,C14,C15,C16,C20,C21,C23,C27,C28,C31,C32,C33,C34,C36,C37,C40,C41,C42,C46,C49,C50,C51,C53,C54,C55,C57,C63,C64,C66,C67,C68,C70,C71,C72,C73,C74,C75,C77,C80,C81,C84,C86,D9
lof_cds	Chr1	73086492	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B53,C42
typical_cds_rare	Chr1	73086492	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B53,C42
lof_cds	Chr1	73086496	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B140,C82
typical_cds_rare	Chr1	73086496	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B140,C82
typical_cds_rare	Chr1	73086509	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B140,B70,C82
lof_cds	Chr1	73086547	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B140,B70,C82
typical_cds_rare	Chr1	73086547	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B140,B70,C82
typical_cds_rare	Chr1	73086566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	C82
typical_cds_rare	Chr1	73086593	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	B22,B53,C37,C42
typical_cds_rare	Chr1	73086594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	B70
lof_cds	Chr1	73086600	C	CCG	INDEL	2bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	103	A10,A18,A2,A22,A25,A3,A4,A9,B1,B10,B100,B101,B102,B105,B107,B11,B113,B115,B117,B120,B126,B127,B129,B133,B138,B14,B16,B17,B19,B22,B29,B3,B35,B4,B42,B43,B44,B46,B48,B49,B53,B55,B58,B61,B65,B66,B68,B72,B75,B76,B78,B8,B82,B84,B85,B90,B93,B95,B99,C11,C12,C16,C18,C19,C21,C22,C24,C29,C30,C31,C32,C34,C35,C4,C40,C41,C42,C43,C44,C50,C51,C55,C56,C57,C58,C59,C67,C68,C69,C71,C75,C8,C80,C83,C84,C87,D10,D2,D4,D5,D6,D7,D8
lof_cds	Chr1	73086605	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	114	A10,A18,A2,A22,A25,A3,A4,A9,B1,B10,B100,B101,B102,B105,B107,B11,B113,B115,B117,B120,B125,B126,B127,B129,B133,B138,B14,B140,B16,B17,B19,B22,B29,B3,B34,B35,B4,B42,B43,B44,B46,B48,B49,B52,B53,B54,B55,B58,B61,B65,B66,B68,B72,B73,B75,B76,B78,B8,B82,B84,B85,B90,B91,B92,B93,B95,B99,C1,C11,C12,C16,C18,C19,C21,C22,C24,C29,C30,C31,C32,C34,C35,C4,C40,C41,C42,C43,C44,C50,C51,C52,C55,C56,C57,C58,C59,C67,C68,C69,C71,C75,C8,C80,C82,C83,C84,C87,D10,D2,D4,D5,D6,D7,D8
typical_cds_rare	Chr1	73086614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	B14
typical_cds_rare	Chr1	73086616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	2	B140,B70
typical_cds_rare	Chr1	73086647	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	C82
typical_cds_rare	Chr1	73086653	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	C82
typical_cds_rare	Chr1	73086683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	B111,C22,C39,C73
typical_cds_rare	Chr1	73086740	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B111,C39,C73
typical_cds_rare	Chr1	73086789	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	B75,C17,C83
lof_cds	Chr1	73086820	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	52	A14,A15,A16,A20,A24,A5,A9,B105,B119,B123,B124,B125,B138,B139,B16,B25,B27,B3,B33,B36,B37,B38,B39,B44,B5,B50,B52,B59,B62,B72,B8,B83,B85,B89,B91,B97,B99,C1,C15,C17,C20,C26,C31,C41,C44,C46,C53,C61,C75,C76,C77,C86
typical_cds_rare	Chr1	73086854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	3	A15,B75,C83
lof_cds	Chr1	73086894	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	13	A7,B111,B29,B44,B85,B95,C56,C58,C7,C78,D10,D5,D9
typical_cds_rare	Chr1	73086897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	1	B104
lof_cds	Chr1	73087045	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1
typical_cds_rare	Chr1	73087045	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1
lof_cds	Chr1	73087051	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1
typical_cds_rare	Chr1	73087051	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1
lof_cds	Chr1	73087053	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1
typical_cds_rare	Chr1	73087053	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131005996	SmilChr01G005682	131005996	rna-XM_057933148.1	4	A3,C41,C68,D1