source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	74331884	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B49
typical_cds_rare	Chr1	74331926	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B111,B57,C85
lof_cds	Chr1	74331966	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B111,B41,B55
typical_cds_rare	Chr1	74331966	ACT	A	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B111,B41,B55
lof_cds	Chr1	74331969	T	TAA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B111,B41,B55
typical_cds_rare	Chr1	74331969	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B111,B41,B55
lof_cds	Chr1	74332005	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C11
typical_cds_rare	Chr1	74332005	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C11
typical_cds_rare	Chr1	74332032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	A2
typical_cds_rare	Chr1	74332033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A19,A4,B18
typical_cds_rare	Chr1	74332042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	A9,B114,B38,B39
typical_cds_rare	Chr1	74332048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A5,B14,C30
typical_cds_rare	Chr1	74332095	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B14,B42,C10,C84
typical_cds_rare	Chr1	74332102	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B94
typical_cds_rare	Chr1	74332103	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	C37,C4
typical_cds_rare	Chr1	74332104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B13,B66
typical_cds_rare	Chr1	74332119	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B94
typical_cds_rare	Chr1	74332132	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B107,B119,B43,C24,C84
typical_cds_rare	Chr1	74332136	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B107,B119,B13,B59,C84
typical_cds_rare	Chr1	74332137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B35,B46,C37
typical_cds_rare	Chr1	74332149	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B136,B17,C15,C37
typical_cds_rare	Chr1	74332151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C17,C42,C47
lof_cds	Chr1	74332152	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	11	A24,B119,B135,B136,B2,B23,B63,B97,C17,C35,C74
typical_cds_rare	Chr1	74332179	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B139,C35
typical_cds_rare	Chr1	74332199	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	A6,C13,C30,C41
lof_cds	Chr1	74332202	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B99
typical_cds_rare	Chr1	74332202	ATT	A	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B99
typical_cds_rare	Chr1	74332206	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B77,C37,D11
typical_cds_rare	Chr1	74332269	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B52
typical_cds_rare	Chr1	74332277	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B118,B28,C45,C71,C73
lof_cds	Chr1	74332296	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	B101,B123,C30,C57,C59,C63
typical_cds_rare	Chr1	74332321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B121,C35,C64,C66
typical_cds_rare	Chr1	74332382	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B15,B78,C47
typical_cds_rare	Chr1	74332463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A13,B83,C86
typical_cds_rare	Chr1	74332679	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B120,B134,C45
typical_cds_rare	Chr1	74332681	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B107
typical_cds_rare	Chr1	74332692	AT	*	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B107
typical_cds_rare	Chr1	74332700	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B78
lof_cds	Chr1	74332706	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	9	A16,A23,A5,B10,B100,B113,B29,C11,C69
lof_cds	Chr1	74332708	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	10	A16,A23,A5,B10,B100,B113,B29,C11,C54,C69
lof_cds	Chr1	74332711	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	11	A2,A5,B122,B95,C2,C22,C57,C69,C76,D1,D11
lof_cds	Chr1	74332712	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	12	A16,A23,A5,B10,B100,B113,B29,C11,C44,C54,C69,C75
typical_cds_rare	Chr1	74332713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B139,B98
lof_cds	Chr1	74332718	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C20,C30,C87
typical_cds_rare	Chr1	74332718	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C20,C30,C87
typical_cds_rare	Chr1	74332720	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	C20,C30,C5,C87
lof_cds	Chr1	74332721	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	C30,C87
typical_cds_rare	Chr1	74332721	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	C30,C87
lof_cds	Chr1	74332784	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	100	A1,A10,A14,A21,A23,A5,A6,A7,B10,B100,B101,B103,B104,B105,B106,B107,B11,B113,B117,B12,B124,B127,B128,B129,B133,B138,B139,B15,B16,B17,B19,B29,B30,B32,B4,B40,B42,B45,B46,B5,B52,B53,B58,B60,B62,B65,B66,B7,B71,B73,B78,B80,B81,B84,B85,B9,B90,B91,B92,B95,C1,C11,C12,C18,C19,C2,C20,C21,C22,C24,C25,C26,C27,C28,C29,C3,C31,C32,C34,C36,C41,C43,C45,C49,C51,C54,C55,C6,C62,C67,C69,C7,C73,C76,D1,D11,D2,D3,D5,D7
lof_cds	Chr1	74333239	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	51	A11,A14,A16,A19,A23,A3,A8,B10,B101,B111,B128,B131,B138,B139,B14,B17,B22,B27,B30,B45,B47,B52,B54,B65,B7,B79,B81,B86,B89,B95,C10,C18,C20,C21,C22,C27,C28,C29,C30,C34,C37,C39,C41,C43,C58,C60,C61,C70,C71,C74,C84
lof_cds	Chr1	74333244	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	50	A11,A14,A16,A19,A23,A3,A8,B10,B101,B111,B128,B131,B138,B139,B14,B17,B22,B27,B30,B45,B47,B52,B54,B65,B7,B79,B86,B89,B95,C10,C18,C20,C21,C22,C27,C28,C29,C30,C34,C37,C39,C41,C43,C58,C60,C61,C70,C71,C74,C84
typical_cds_rare	Chr1	74333259	TCC	*	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A25,B110,B76
typical_cds_rare	Chr1	74333292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B61,C5
lof_cds	Chr1	74333310	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	A22
typical_cds_rare	Chr1	74333310	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	A22
lof_cds	Chr1	74333312	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	B58,B79,C36,C53,C62,C82
lof_cds	Chr1	74333316	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B79,C36,C53,C62,C82
typical_cds_rare	Chr1	74333316	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B79,C36,C53,C62,C82
lof_cds	Chr1	74333323	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	11	A10,B68,B79,B85,C1,C36,C52,C53,C62,C78,C82
typical_cds_rare	Chr1	74333513	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B121,C39,C7
typical_cds_rare	Chr1	74333514	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B76
lof_cds	Chr1	74333541	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	132	A1,A13,A16,A18,A19,A2,A20,A23,A25,A4,A5,A7,A8,B102,B105,B108,B109,B110,B111,B113,B117,B125,B127,B131,B132,B134,B136,B137,B138,B140,B17,B18,B19,B20,B21,B22,B24,B25,B27,B29,B3,B31,B35,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B48,B49,B56,B58,B59,B6,B60,B63,B66,B68,B69,B70,B71,B72,B74,B75,B79,B8,B81,B82,B83,B84,B87,B9,B93,B95,B96,B97,B98,B99,C10,C12,C13,C15,C16,C18,C2,C20,C22,C24,C27,C3,C33,C34,C36,C42,C44,C45,C46,C47,C48,C5,C51,C52,C54,C55,C59,C6,C60,C62,C7,C71,C72,C73,C74,C75,C77,C8,C80,C81,C82,C85,C86,D1,D10,D2,D4,D5
lof_cds	Chr1	74333544	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	115	A1,A13,A16,A18,A19,A2,A20,A23,A25,A4,A5,A7,A8,B102,B108,B110,B111,B113,B117,B125,B127,B132,B136,B137,B138,B140,B17,B18,B19,B20,B21,B22,B24,B25,B29,B3,B31,B36,B37,B38,B40,B41,B42,B43,B44,B45,B46,B48,B58,B59,B6,B60,B63,B66,B68,B69,B70,B71,B72,B74,B75,B79,B8,B81,B82,B83,B84,B87,B9,B93,B95,B97,B99,C10,C12,C13,C15,C16,C2,C20,C24,C27,C3,C34,C36,C42,C44,C45,C46,C47,C48,C5,C51,C52,C54,C55,C59,C6,C60,C62,C7,C72,C73,C74,C75,C77,C8,C80,C82,C85,C86,D10,D2,D4,D5
lof_cds	Chr1	74333550	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B91,C84
typical_cds_rare	Chr1	74333550	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B91,C84
typical_cds_rare	Chr1	74333551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B140,B15,B26
lof_cds	Chr1	74333554	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	123	A1,A13,A16,A18,A19,A2,A20,A23,A25,A4,A5,A7,A8,B102,B108,B109,B110,B111,B113,B117,B125,B127,B132,B136,B137,B138,B140,B17,B18,B19,B20,B21,B22,B24,B25,B29,B3,B31,B36,B37,B38,B39,B40,B41,B42,B43,B44,B45,B46,B48,B56,B58,B59,B6,B60,B63,B66,B69,B70,B71,B72,B74,B75,B79,B8,B81,B82,B83,B84,B87,B9,B91,B93,B95,B96,B97,B98,B99,C10,C12,C13,C15,C16,C2,C20,C22,C24,C27,C3,C33,C34,C36,C42,C44,C45,C46,C47,C48,C5,C51,C52,C54,C55,C59,C6,C60,C62,C7,C72,C73,C74,C75,C77,C8,C80,C82,C85,C86,D1,D10,D2,D4,D5
lof_cds	Chr1	74333557	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	22	A1,A23,B102,B109,B117,B138,B20,B45,B70,B72,B93,B98,C3,C36,C46,C47,C52,C72,C80,C85,D10,D5
typical_cds_rare	Chr1	74333580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C64
typical_cds_rare	Chr1	74333607	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B15,C70
lof_cds	Chr1	74333611	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A9,B140,B46,B55,C31
typical_cds_rare	Chr1	74333611	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A9,B140,B46,B55,C31
lof_cds	Chr1	74333613	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A9,B46,B55,C14,C31
typical_cds_rare	Chr1	74333613	TGG	T	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A9,B46,B55,C14,C31
lof_cds	Chr1	74333623	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	14	A10,A9,B126,B132,B32,B75,B83,B9,C14,C15,C4,C7,C70,C76
lof_cds	Chr1	74333635	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	A25,B137,B91,C13,C84,C9
typical_cds_rare	Chr1	74333646	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B76
typical_cds_rare	Chr1	74334711	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B121,C19
typical_cds_rare	Chr1	74334712	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B27,B63
typical_cds_rare	Chr1	74334728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B135,B83
lof_cds	Chr1	74334742	T	TGC	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	96	A13,A19,A2,A21,A24,A3,A4,A5,A6,B10,B103,B105,B107,B113,B117,B122,B125,B126,B133,B134,B14,B15,B17,B19,B22,B25,B28,B31,B32,B37,B4,B41,B44,B45,B46,B47,B54,B55,B62,B63,B64,B67,B7,B73,B74,B79,B8,B80,B82,B92,B98,B99,C12,C18,C19,C2,C22,C24,C25,C26,C28,C29,C3,C30,C32,C33,C34,C42,C43,C45,C46,C47,C49,C5,C50,C52,C55,C56,C61,C62,C64,C66,C67,C76,C77,C78,C80,C83,C84,C85,C86,C87,D11,D4,D8,D9
typical_cds_rare	Chr1	74334743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B76,B95,C17
lof_cds	Chr1	74334747	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	98	A13,A19,A2,A21,A24,A3,A4,A5,A6,B10,B103,B105,B107,B113,B117,B122,B125,B126,B133,B134,B14,B15,B17,B19,B22,B25,B28,B30,B31,B32,B37,B4,B41,B44,B45,B46,B47,B54,B55,B62,B63,B64,B67,B7,B73,B74,B79,B8,B80,B82,B92,B98,B99,C1,C12,C18,C19,C2,C22,C24,C25,C26,C28,C29,C3,C30,C32,C33,C34,C42,C43,C45,C46,C47,C49,C5,C50,C52,C55,C56,C61,C62,C64,C66,C67,C76,C77,C78,C80,C83,C84,C85,C86,C87,D11,D4,D8,D9
typical_cds_rare	Chr1	74334760	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	A3,A8
typical_cds_rare	Chr1	74334784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C80
lof_cds	Chr1	74334793	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	10	A15,A3,B123,B13,C25,C33,C39,C69,C70,C79
lof_cds	Chr1	74334802	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	152	A1,A13,A18,A19,A2,A20,A21,A22,A24,A3,A4,A5,A6,A8,B1,B10,B101,B103,B105,B106,B107,B11,B110,B113,B114,B117,B122,B125,B126,B129,B132,B133,B134,B140,B15,B16,B17,B19,B2,B20,B22,B24,B25,B26,B28,B29,B30,B31,B32,B33,B34,B36,B37,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B5,B53,B55,B57,B60,B62,B63,B64,B67,B68,B69,B7,B73,B74,B75,B78,B79,B80,B81,B82,B84,B87,B88,B9,B90,B91,B92,B94,B96,B98,B99,C11,C14,C15,C18,C19,C2,C22,C23,C24,C25,C28,C29,C3,C30,C31,C32,C33,C34,C36,C37,C38,C4,C42,C43,C45,C46,C47,C48,C49,C5,C50,C52,C55,C56,C58,C59,C64,C66,C68,C7,C71,C72,C73,C74,C76,C77,C78,C8,C80,C83,C84,C85,C86,C87,D11,D4,D8,D9
lof_cds	Chr1	74334809	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	A8,B111,B49,B72,C20,C40
lof_cds	Chr1	74334814	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	B3,B42,B83,C10,C21,C80
lof_cds	Chr1	74334824	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C25,C39,C79
typical_cds_rare	Chr1	74334824	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C25,C39,C79
lof_cds	Chr1	74334832	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C25,C39,C79
typical_cds_rare	Chr1	74334832	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C25,C39,C79
typical_cds_rare	Chr1	74336279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A9,B126,B32,C19,C70
typical_cds_rare	Chr1	74336288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B101,B96,C18,C28,D5
typical_cds_rare	Chr1	74336324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A11,B102,B107,B30,B33
lof_cds	Chr1	74336336	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	7	B121,B29,B76,B82,B86,B90,B97
lof_cds	Chr1	74336345	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	7	B2,B29,B64,B85,B86,C20,C25
lof_cds	Chr1	74336346	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	15	A20,A21,B106,B110,B119,B7,B70,B75,B77,B81,C23,C27,C43,C59,D8
typical_cds_rare	Chr1	74336349	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B24,B86,B95
lof_cds	Chr1	74336362	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	13	B107,B138,B17,B57,B73,B78,B88,C29,C30,C37,C43,C70,C87
typical_cds_rare	Chr1	74337129	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B40,B64,C14
typical_cds_rare	Chr1	74337186	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B29
lof_cds	Chr1	74337187	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	37	A2,A20,A3,B101,B102,B103,B106,B110,B115,B120,B131,B134,B137,B15,B17,B24,B33,B40,B43,B50,B56,B6,B7,B83,B84,B90,C22,C35,C38,C40,C43,C61,C64,C67,C74,D7,D9
lof_cds	Chr1	74337191	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	23	A2,A20,A3,B101,B103,B115,B134,B15,B40,B43,B50,B6,B7,B83,B84,B90,C22,C35,C43,C64,C67,D7,D9
lof_cds	Chr1	74337215	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	19	A20,A3,B101,B115,B134,B15,B17,B40,B42,B6,B7,B83,B90,B93,C22,C43,C64,C67,D7
lof_cds	Chr1	74337220	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	7	B106,B124,B55,B71,C56,C87,D5
typical_cds_rare	Chr1	74337250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A10,B121,B126,C50,C78
typical_cds_rare	Chr1	74337253	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	B106,B124,B55,C56,D5
typical_cds_rare	Chr1	74337280	GCT	*	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B4,B69,B76
typical_cds_rare	Chr1	74337326	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B103,B22,B30,B82
typical_cds_rare	Chr1	74337357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B112,B136,B89
lof_cds	Chr1	74337358	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B103,B41,B8,C24
typical_cds_rare	Chr1	74337358	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B103,B41,B8,C24
typical_cds_rare	Chr1	74337427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B83,C55,C76,D3
typical_cds_rare	Chr1	74337429	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B91,C80,D9
lof_cds	Chr1	74337462	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	6	B102,B138,C34,C52,C59,C72
lof_cds	Chr1	74337473	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	A9,B107,B57,C12
typical_cds_rare	Chr1	74337473	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	A9,B107,B57,C12
typical_cds_rare	Chr1	74337495	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B51,C23
typical_cds_rare	Chr1	74337512	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B33,B82
typical_cds_rare	Chr1	74337527	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B55,B59,B86
typical_cds_rare	Chr1	74337624	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	C24,C47,C80
typical_cds_rare	Chr1	74337627	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B75,C20
typical_cds_rare	Chr1	74337665	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A11,B130,C50
typical_cds_rare	Chr1	74337695	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B12,B122
lof_cds	Chr1	74337702	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	9	A10,B11,B70,B72,B85,C1,C47,C52,C72
typical_cds_rare	Chr1	74337829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B59,B86,C5
typical_cds_rare	Chr1	74337839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B69,C29,D2
typical_cds_rare	Chr1	74337845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C30
typical_cds_rare	Chr1	74337854	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A3,B103,B7,C25,C49
typical_cds_rare	Chr1	74337915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B38,B9,D7
typical_cds_rare	Chr1	74337922	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B121
typical_cds_rare	Chr1	74337926	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	A20,B121
typical_cds_rare	Chr1	74337929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A2,C64,C66
typical_cds_rare	Chr1	74337938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B41,B48,C58
lof_cds	Chr1	74337943	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B111,B65,B97,D5
typical_cds_rare	Chr1	74337943	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	4	B111,B65,B97,D5
typical_cds_rare	Chr1	74337976	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	5	A16,B118,C73,C83,C86
typical_cds_rare	Chr1	74337994	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B104,B107,C29
lof_cds	Chr1	74338044	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B85
typical_cds_rare	Chr1	74338044	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	B85
lof_cds	Chr1	74338064	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	8	B127,B88,C12,C20,C29,C30,C4,C9
lof_cds	Chr1	74338081	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	10	B121,B13,B66,B7,B76,B80,B83,C2,C26,C7
lof_cds	Chr1	74338083	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	10	B121,B13,B66,B7,B76,B80,B83,C2,C26,C7
lof_cds	Chr1	74338135	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	10	A9,B32,B65,B73,B85,C20,C7,C70,C87,C9
typical_cds_rare	Chr1	74338138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C40
typical_cds_rare	Chr1	74338145	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B36,B91
lof_cds	Chr1	74338156	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	8	B111,B119,B124,B126,B97,C14,C71,C84
lof_cds	Chr1	74338157	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	8	B111,B119,B124,B126,B97,C14,C71,C84
lof_cds	Chr1	74338159	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	128	A11,A14,A16,A20,A25,A3,A6,A9,B10,B101,B102,B103,B105,B11,B110,B113,B119,B12,B122,B125,B128,B129,B130,B132,B136,B137,B138,B140,B15,B17,B19,B22,B24,B27,B28,B29,B3,B30,B32,B33,B36,B4,B42,B43,B44,B45,B47,B5,B52,B54,B58,B59,B6,B60,B62,B64,B65,B7,B70,B72,B73,B74,B75,B77,B79,B8,B81,B83,B84,B85,B86,B87,B9,B91,B92,B95,B99,C10,C12,C13,C15,C18,C19,C2,C20,C21,C22,C23,C28,C29,C3,C30,C34,C35,C36,C37,C38,C39,C41,C43,C44,C45,C46,C47,C49,C51,C58,C6,C60,C61,C63,C64,C68,C7,C70,C73,C74,C75,C76,C77,C78,C8,C82,C87,C9,D6,D7,D9
lof_cds	Chr1	74338160	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	83	A14,A16,A25,A3,A6,A9,B10,B101,B102,B103,B105,B11,B110,B113,B119,B12,B122,B125,B128,B130,B132,B136,B137,B140,B15,B17,B22,B24,B28,B29,B30,B42,B43,B44,B47,B52,B58,B59,B6,B62,B64,B7,B73,B77,B79,B8,B81,B83,B84,B87,B9,B91,B92,B95,C10,C13,C15,C18,C21,C22,C28,C3,C35,C37,C39,C44,C45,C51,C58,C6,C60,C68,C7,C73,C74,C75,C76,C77,C78,C87,C9,D6,D7
typical_cds_rare	Chr1	74338227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B123,B42,D8
lof_cds	Chr1	74338276	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B33,D8
typical_cds_rare	Chr1	74338276	GGT	G	INDEL	2bp_deletion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	2	B33,D8
typical_cds_rare	Chr1	74338295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	A8,B119,B64
lof_cds	Chr1	74338307	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	12	A9,B114,B119,B136,B27,B38,B51,B76,B97,C1,C15,C85
lof_cds	Chr1	74338312	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B119,B43,B64
typical_cds_rare	Chr1	74338312	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	3	B119,B43,B64
typical_cds_rare	Chr1	74338345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006127	SmilChr01G005832	131006127	rna-XM_057933287.1	1	C46