source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	74739399	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	14	A25,B105,B114,B137,B18,B45,B83,B84,C13,C33,C45,C58,C72,C86
lof_cds	Chr1	74739406	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	15	A25,B105,B114,B137,B14,B18,B45,B83,B84,C13,C33,C45,C58,C72,C86
lof_cds	Chr1	74739539	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C51
typical_cds_rare	Chr1	74739539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C51
lof_cds	Chr1	74739555	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B7
typical_cds_rare	Chr1	74739555	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B7
typical_cds_rare	Chr1	74739589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C14
typical_cds_rare	Chr1	74739634	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B104,B35,B56,B96,D3
lof_cds	Chr1	74739662	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B136
typical_cds_rare	Chr1	74739662	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B136
typical_cds_rare	Chr1	74739698	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	A15,B117,B25,C49,C82
typical_cds_rare	Chr1	74739736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B104,B35,B56,B96,D3
lof_cds	Chr1	74739774	T	TCG	INDEL	2bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	93	A10,A13,A15,A19,A20,A23,A24,A25,A4,A6,A9,B100,B103,B105,B106,B112,B114,B118,B119,B125,B126,B128,B133,B135,B137,B138,B14,B18,B19,B21,B31,B34,B35,B37,B39,B41,B42,B45,B47,B49,B56,B58,B59,B61,B63,B64,B65,B69,B71,B72,B73,B74,B76,B77,B82,B83,B84,B87,B91,B94,B96,C1,C13,C15,C18,C22,C25,C28,C31,C33,C37,C39,C41,C44,C45,C46,C51,C54,C58,C59,C63,C7,C70,C71,C72,C73,C74,C82,C85,C86,D10,D11,D4
lof_cds	Chr1	74739776	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	92	A10,A13,A15,A19,A20,A23,A24,A25,A4,A6,A9,B100,B103,B105,B106,B114,B118,B119,B125,B126,B128,B133,B135,B137,B138,B14,B18,B19,B21,B31,B34,B35,B37,B39,B41,B42,B45,B49,B56,B58,B59,B61,B63,B64,B65,B69,B71,B72,B73,B74,B76,B77,B82,B83,B84,B87,B91,B94,B96,C1,C13,C15,C18,C22,C25,C28,C31,C33,C37,C39,C41,C43,C44,C45,C46,C51,C54,C58,C59,C63,C7,C70,C71,C72,C73,C74,C82,C85,C86,D10,D11,D4
typical_cds_rare	Chr1	74739779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B104
lof_cds	Chr1	74739793	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B112,B140,B44,B67,C73
typical_cds_rare	Chr1	74739793	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B112,B140,B44,B67,C73
lof_cds	Chr1	74739798	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B108
typical_cds_rare	Chr1	74739798	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B108
lof_cds	Chr1	74739904	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	30	A15,A2,A24,A6,B106,B118,B123,B126,B128,B18,B42,B49,B53,B63,B65,B84,B87,B93,B94,B97,C21,C25,C33,C45,C49,C52,C58,C77,C82,D10
lof_cds	Chr1	74739908	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	31	A15,A2,A24,A6,B106,B118,B123,B126,B128,B18,B42,B49,B53,B63,B65,B71,B84,B87,B93,B94,B97,C21,C25,C33,C45,C49,C52,C58,C77,C82,D10
typical_cds_rare	Chr1	74739937	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B112,B89,C39,C56,C79
lof_cds	Chr1	74739940	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	32	A15,A24,A6,B118,B123,B126,B128,B136,B18,B19,B29,B41,B42,B49,B53,B70,B71,B84,B87,B93,B94,C13,C21,C25,C33,C45,C52,C58,C59,C77,C82,D10
lof_cds	Chr1	74739943	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	33	A15,A24,A6,B118,B123,B126,B128,B136,B18,B19,B29,B41,B42,B49,B53,B65,B70,B71,B84,B87,B93,B94,C13,C21,C25,C33,C45,C52,C58,C59,C77,C82,D10
typical_cds_rare	Chr1	74739946	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	B33,B87,C19,C85
typical_cds_rare	Chr1	74739960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	A15,B125,B130,C80
typical_cds_rare	Chr1	74739973	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B112,B89,C39,C56,C79
lof_cds	Chr1	74739976	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B125
typical_cds_rare	Chr1	74739976	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B125
lof_cds	Chr1	74739977	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	12	A6,B126,B128,B136,B37,B45,B49,B59,C21,C41,C45,C49
lof_cds	Chr1	74739984	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	9	B126,B128,B133,B136,B37,B53,B59,B77,C41
lof_cds	Chr1	74739990	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	3	A14,A16,B44
typical_cds_rare	Chr1	74739990	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	3	A14,A16,B44
lof_cds	Chr1	74740011	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	A14,B126,B128,C2
typical_cds_rare	Chr1	74740011	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	A14,B126,B128,C2
lof_cds	Chr1	74740013	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	37	A11,A23,B104,B112,B136,B138,B139,B140,B19,B31,B33,B37,B44,B45,B59,B61,B67,B71,B72,B73,B75,B87,C17,C19,C41,C46,C51,C54,C58,C61,C62,C7,C72,C73,C78,C85,D3
lof_cds	Chr1	74740015	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	33	A11,B104,B112,B136,B138,B139,B140,B19,B31,B33,B37,B45,B61,B67,B71,B72,B73,B75,B87,C17,C19,C41,C46,C51,C54,C58,C61,C62,C72,C73,C78,C85,D3
lof_cds	Chr1	74740025	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	A24,B41
typical_cds_rare	Chr1	74740025	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	A24,B41
lof_cds	Chr1	74740029	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	A24,B41
typical_cds_rare	Chr1	74740029	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	A24,B41
lof_cds	Chr1	74740066	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	6	B125,B24,B88,B90,C27,C80
typical_cds_rare	Chr1	74740115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	B24,B90,B92,C80
lof_cds	Chr1	74740171	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	6	B125,B24,B88,B90,B92,C27
lof_cds	Chr1	74740180	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	6	B125,B24,B88,B90,B92,C27
typical_cds_rare	Chr1	74740230	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	B125,B88,B90,C27
lof_cds	Chr1	74740239	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	3	B21,C14,C4
typical_cds_rare	Chr1	74740239	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	3	B21,C14,C4
lof_cds	Chr1	74740250	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B39,B53
typical_cds_rare	Chr1	74740250	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B39,B53
typical_cds_rare	Chr1	74740252	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B39,B53
typical_cds_rare	Chr1	74740285	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B130,B90,B92,C27,C80
typical_cds_rare	Chr1	74740307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C82
typical_cds_rare	Chr1	74740369	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C71
typical_cds_rare	Chr1	74740397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	A2,B5,B97,C70,C83
typical_cds_rare	Chr1	74740409	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B82
typical_cds_rare	Chr1	74740432	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	4	B125,B90,B92,C27
typical_cds_rare	Chr1	74740441	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C71
lof_cds	Chr1	74740459	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B121
typical_cds_rare	Chr1	74740459	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B121
typical_cds_rare	Chr1	74740511	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B125,B90,B92,C27,C80
lof_cds	Chr1	74740514	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	6	B125,B24,B90,B92,C27,C80
lof_cds	Chr1	74740517	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	7	B125,B24,B88,B90,B92,C27,C80
typical_cds_rare	Chr1	74740555	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	B140
lof_cds	Chr1	74740563	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C35
typical_cds_rare	Chr1	74740563	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	1	C35
typical_cds_rare	Chr1	74740567	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	5	B9,C14,C19,C39,C86
typical_cds_rare	Chr1	74740574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80
lof_cds	Chr1	74740606	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80
typical_cds_rare	Chr1	74740606	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80
lof_cds	Chr1	74740652	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80
typical_cds_rare	Chr1	74740652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80
typical_cds_rare	Chr1	74740657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006175	SmilChr01G005880	131006175	rna-XM_057933351.1,rna-XM_057933352.1	2	B92,C80