source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	75155858	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C54
typical_cds_rare	Chr1	75155943	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C84
typical_cds_rare	Chr1	75155948	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B128,B21,C84
typical_cds_rare	Chr1	75155980	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	A20
typical_cds_rare	Chr1	75155988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B12,C49
typical_cds_rare	Chr1	75156025	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C59
typical_cds_rare	Chr1	75156033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B120,B125
typical_cds_rare	Chr1	75156114	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	A20,B58
lof_cds	Chr1	75156242	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B65,C32
typical_cds_rare	Chr1	75156242	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B65,C32
typical_cds_rare	Chr1	75156292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B26,C60
typical_cds_rare	Chr1	75156309	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B118,B36
typical_cds_rare	Chr1	75156337	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	A5,C60
typical_cds_rare	Chr1	75156353	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	A5,C60
lof_cds	Chr1	75156395	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B107,C31,C54
typical_cds_rare	Chr1	75156395	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B107,C31,C54
lof_cds	Chr1	75156421	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	C48,C59
typical_cds_rare	Chr1	75156421	T	TGG	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	C48,C59
lof_cds	Chr1	75156422	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	C48,C59
typical_cds_rare	Chr1	75156422	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	C48,C59
typical_cds_rare	Chr1	75156468	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B103,B27,B56
typical_cds_rare	Chr1	75156480	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B103,C87
typical_cds_rare	Chr1	75156506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B17
typical_cds_rare	Chr1	75156516	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	D8
typical_cds_rare	Chr1	75156535	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B56
lof_cds	Chr1	75156539	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	6	B109,B71,B96,C62,D3,D8
typical_cds_rare	Chr1	75156734	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B27,C39,D1
typical_cds_rare	Chr1	75156748	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	A16,B3,B37
typical_cds_rare	Chr1	75156832	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B91
typical_cds_rare	Chr1	75156834	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B24,B91,C36,C44
typical_cds_rare	Chr1	75156903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B41,B58,B98,C37
lof_cds	Chr1	75156909	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	17	A1,A8,B102,B105,B41,B47,B58,B64,B71,B74,B98,C27,C33,C37,C42,C69,C80
lof_cds	Chr1	75156914	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	17	A1,A8,B102,B105,B41,B47,B58,B64,B71,B74,B98,C27,C33,C37,C42,C69,C80
lof_cds	Chr1	75156976	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B90
typical_cds_rare	Chr1	75156976	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B90
lof_cds	Chr1	75156977	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	45	A18,A20,A3,B10,B11,B118,B12,B123,B13,B131,B137,B14,B17,B18,B21,B30,B42,B44,B45,B55,B6,B62,B63,B73,B75,B77,B84,B85,C13,C14,C16,C31,C46,C47,C5,C50,C55,C72,C75,C76,C78,C79,C83,C87,D4
lof_cds	Chr1	75156979	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	34	A18,A20,A3,B10,B11,B118,B12,B13,B131,B14,B17,B18,B21,B30,B42,B44,B45,B55,B6,B62,B73,B75,B84,C14,C16,C31,C46,C47,C5,C50,C55,C75,C76,C79
lof_cds	Chr1	75157046	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	27	A1,A11,A22,A8,B102,B105,B47,B57,B69,B71,B73,B74,B79,B8,B89,B91,C11,C19,C3,C38,C55,C69,C73,C80,C84,D4,D9
lof_cds	Chr1	75157061	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C14
typical_cds_rare	Chr1	75157061	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C14
typical_cds_rare	Chr1	75157088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B103,B38,C19,C84
typical_cds_rare	Chr1	75157097	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B64
lof_cds	Chr1	75157113	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	A14,B11,C5,C74,C86
typical_cds_rare	Chr1	75157113	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	A14,B11,C5,C74,C86
typical_cds_rare	Chr1	75157127	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B11,C14,C56
typical_cds_rare	Chr1	75157183	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B102,B128,B27
lof_cds	Chr1	75157190	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C78
typical_cds_rare	Chr1	75157190	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C78
typical_cds_rare	Chr1	75157205	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B92
typical_cds_rare	Chr1	75157211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	A15,B134
typical_cds_rare	Chr1	75157224	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B134,C79
typical_cds_rare	Chr1	75157225	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B100,B122,C4
typical_cds_rare	Chr1	75157289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B13,B6,C63,C67
typical_cds_rare	Chr1	75157299	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B85,C55
lof_cds	Chr1	75157303	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B85,C55
typical_cds_rare	Chr1	75157303	A	AGT	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B85,C55
typical_cds_rare	Chr1	75157317	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B60,B67
lof_cds	Chr1	75157394	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C75
typical_cds_rare	Chr1	75157394	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C75
lof_cds	Chr1	75157398	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	13	B13,B29,B32,B4,B58,B59,B7,C13,C15,C44,C56,C61,C84
lof_cds	Chr1	75157408	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C75
typical_cds_rare	Chr1	75157408	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C75
lof_cds	Chr1	75157463	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	85	A1,A10,A11,A14,A15,A18,A19,A2,A21,B1,B100,B104,B106,B108,B109,B110,B111,B112,B119,B125,B13,B134,B138,B139,B15,B16,B18,B24,B25,B28,B29,B32,B33,B36,B37,B38,B4,B40,B41,B48,B56,B57,B58,B59,B6,B60,B66,B67,B7,B71,B72,B75,B90,B92,B94,C13,C17,C2,C24,C29,C33,C36,C37,C43,C44,C49,C57,C59,C61,C62,C65,C67,C7,C73,C75,C79,C83,C86,C87,D10,D11,D2,D4,D5,D6
typical_cds_rare	Chr1	75157487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B99
typical_cds_rare	Chr1	75157520	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C87
lof_cds	Chr1	75157632	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	B130,B88,C25,C4,C55
typical_cds_rare	Chr1	75157632	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	B130,B88,C25,C4,C55
lof_cds	Chr1	75157634	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	B130,B88,C25,C4,C55
typical_cds_rare	Chr1	75157634	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	B130,B88,C25,C4,C55
lof_cds	Chr1	75157635	C	CGT	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	6	B117,B20,C28,C48,C63,D10
lof_cds	Chr1	75157658	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	81	A11,A13,A14,A15,A19,A2,A25,A3,B100,B104,B108,B110,B117,B122,B125,B130,B14,B15,B16,B17,B18,B20,B24,B28,B3,B31,B32,B33,B36,B37,B4,B40,B48,B59,B60,B66,B7,B71,B72,B75,B78,B8,B88,B90,B91,B92,B94,B95,C12,C13,C17,C2,C20,C24,C25,C28,C31,C33,C34,C36,C37,C4,C41,C43,C44,C48,C49,C55,C59,C61,C63,C64,C7,C73,C75,C86,D10,D2,D4,D5,D7
typical_cds_rare	Chr1	75157789	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B133,B14,B24,B84
typical_cds_rare	Chr1	75157843	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B74
lof_cds	Chr1	75157894	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157894	T	TAA	INDEL	2bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
lof_cds	Chr1	75157896	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157896	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157911	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C20
lof_cds	Chr1	75157919	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157919	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
lof_cds	Chr1	75157922	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157922	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B1,C49
typical_cds_rare	Chr1	75157925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B1,C15,C49
typical_cds_rare	Chr1	75157990	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B23,B30,B63,B89
typical_cds_rare	Chr1	75158002	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B106,B89,D3
typical_cds_rare	Chr1	75158068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	C44
typical_cds_rare	Chr1	75158142	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	C35,D4
typical_cds_rare	Chr1	75158158	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	2	B55,C28
typical_cds_rare	Chr1	75158159	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	4	B11,C61,C62,D4
typical_cds_rare	Chr1	75158192	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	3	B70,C14,C37
lof_cds	Chr1	75158270	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	A24,B115,B34,B43,B48
typical_cds_rare	Chr1	75158270	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	5	A24,B115,B34,B43,B48
typical_cds_rare	Chr1	75158282	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013478	SmilChr01G005942	131013478	rna-XM_057941570.1	1	B40