source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	75494308	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C78
typical_cds_rare	Chr1	75494308	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C78
lof_cds	Chr1	75494312	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	188	A1,A10,A11,A14,A15,A16,A19,A2,A20,A21,A22,A23,A24,A25,A5,A6,A9,B1,B101,B102,B103,B105,B107,B110,B112,B113,B114,B117,B118,B12,B120,B121,B122,B124,B125,B126,B127,B128,B129,B130,B133,B134,B135,B138,B139,B140,B15,B17,B18,B19,B2,B20,B22,B23,B24,B26,B27,B28,B3,B30,B32,B33,B35,B36,B38,B39,B4,B40,B41,B42,B44,B45,B46,B47,B48,B49,B52,B53,B54,B55,B56,B57,B59,B6,B60,B64,B66,B67,B68,B7,B71,B72,B74,B76,B77,B78,B79,B80,B82,B83,B85,B86,B87,B88,B89,B9,B90,B91,B92,B93,B94,B96,B98,B99,C1,C10,C11,C12,C14,C15,C16,C18,C19,C20,C22,C23,C24,C25,C27,C29,C3,C30,C31,C32,C33,C35,C36,C37,C38,C4,C40,C42,C43,C44,C45,C46,C47,C48,C49,C5,C51,C54,C55,C56,C57,C59,C6,C60,C61,C63,C67,C68,C69,C7,C70,C71,C74,C75,C76,C77,C79,C8,C80,C81,C82,C83,C84,C85,C86,C9,D1,D10,D2,D3,D4,D5,D7,D8
lof_cds	Chr1	75494349	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	148	A10,A11,A15,A16,A2,A20,A21,A22,A23,A24,A25,A5,A6,A8,A9,B1,B101,B102,B103,B104,B105,B106,B107,B112,B114,B117,B12,B120,B121,B124,B126,B127,B128,B129,B130,B133,B134,B135,B138,B139,B15,B17,B19,B2,B22,B23,B24,B26,B28,B3,B32,B33,B35,B38,B4,B40,B41,B42,B44,B46,B47,B48,B49,B52,B53,B54,B55,B59,B6,B60,B64,B66,B68,B71,B72,B78,B80,B82,B85,B87,B88,B89,B9,B91,B92,B93,B96,B97,B98,B99,C11,C14,C15,C16,C17,C20,C22,C23,C24,C25,C27,C29,C3,C30,C31,C32,C35,C36,C38,C4,C40,C41,C44,C45,C46,C47,C48,C49,C5,C50,C51,C53,C55,C56,C57,C6,C60,C61,C62,C64,C65,C68,C69,C71,C77,C79,C8,C80,C81,C82,C84,C9,D1,D2,D4,D5,D7,D8
typical_cds_rare	Chr1	75494359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B30,B91
lof_cds	Chr1	75494368	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	41	A10,A9,B1,B102,B117,B127,B129,B134,B20,B22,B27,B30,B32,B52,B60,B64,B66,B68,B79,B87,B89,B91,B93,B94,C11,C14,C15,C16,C20,C31,C32,C38,C44,C48,C61,C69,C8,C81,D1,D10,D5
typical_cds_rare	Chr1	75494388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B42,C11,C24,C49
typical_cds_rare	Chr1	75494405	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B101,B22,B89,B91,C38
lof_cds	Chr1	75494447	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B126,B5,B80
typical_cds_rare	Chr1	75494447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B126,B5,B80
typical_cds_rare	Chr1	75494472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B104
typical_cds_rare	Chr1	75494540	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B130,D9
typical_cds_rare	Chr1	75494546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B97
typical_cds_rare	Chr1	75494552	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B32,B99,C20,C46
typical_cds_rare	Chr1	75494595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B41
typical_cds_rare	Chr1	75494629	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B104
typical_cds_rare	Chr1	75494748	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
typical_cds_rare	Chr1	75494759	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	A14,A19,B21,B44,B74
typical_cds_rare	Chr1	75494776	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A14,C49
typical_cds_rare	Chr1	75494838	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A3,C28
typical_cds_rare	Chr1	75494856	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B31,C21,C26,C46
typical_cds_rare	Chr1	75494891	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B31,C21
lof_cds	Chr1	75494964	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	10	A13,A14,A20,B10,B119,B16,B46,B95,C12,D9
lof_cds	Chr1	75495020	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	11	A13,A14,A20,B10,B119,B16,B32,B46,B95,C9,D9
lof_cds	Chr1	75495036	TGA	T	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	14	A13,A14,A20,B10,B119,B16,B17,B32,B41,B46,B53,B95,C9,D9
lof_cds	Chr1	75495039	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	12	A13,A20,B10,B119,B16,B17,B32,B46,B53,B95,C9,D9
lof_cds	Chr1	75495040	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	C79,C83,C87
typical_cds_rare	Chr1	75495040	C	CT	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	C79,C83,C87
typical_cds_rare	Chr1	75495051	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	C79,C83
lof_cds	Chr1	75495065	CCA	C	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	23	A13,A14,A18,B10,B119,B126,B132,B16,B18,B21,B32,B41,B46,B53,B8,B80,B95,C17,C39,C68,C78,C80,C9
typical_cds_rare	Chr1	75495068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B103,B112,C12,C86
lof_cds	Chr1	75495070	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	23	A13,A14,A18,A21,B10,B119,B132,B16,B18,B21,B32,B41,B46,B53,B8,B80,B95,C17,C39,C68,C78,C80,C9
lof_cds	Chr1	75495125	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	28	A13,A14,A18,B10,B110,B18,B19,B21,B32,B41,B46,B53,B73,B77,B8,B80,B82,B95,C17,C19,C25,C35,C39,C47,C68,C74,C78,C9
typical_cds_rare	Chr1	75495157	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	D11
typical_cds_rare	Chr1	75495198	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C59
typical_cds_rare	Chr1	75495213	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B105
typical_cds_rare	Chr1	75495216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A6,B9
lof_cds	Chr1	75495226	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	25	A13,A18,B119,B124,B19,B21,B54,B67,B70,B73,B8,B80,B88,B94,C1,C12,C13,C19,C43,C46,C57,C6,C74,C78,C9
lof_cds	Chr1	75495231	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	22	A13,A21,B117,B119,B124,B19,B54,B67,B70,B73,B8,B80,B94,C1,C12,C13,C19,C43,C46,C57,C78,C9
lof_cds	Chr1	75495244	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B117,B67,C13
typical_cds_rare	Chr1	75495244	A	ACC	INDEL	2bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B117,B67,C13
lof_cds	Chr1	75495245	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	9	A7,B117,B37,B48,C25,C27,C39,C48,C84
lof_cds	Chr1	75495251	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B121,B122,B47,B6,C30
typical_cds_rare	Chr1	75495251	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B121,B122,B47,B6,C30
lof_cds	Chr1	75495252	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	74	A11,A21,A22,A24,A4,A7,A9,B10,B103,B106,B107,B108,B11,B110,B114,B115,B119,B121,B122,B125,B126,B128,B133,B135,B14,B20,B22,B23,B24,B27,B28,B3,B33,B38,B39,B47,B55,B59,B72,B79,B90,B91,B92,C10,C11,C12,C14,C17,C23,C25,C27,C28,C30,C31,C45,C47,C48,C50,C54,C55,C62,C64,C66,C70,C71,C72,C80,C84,C85,C86,C87,D10,D4,D6
lof_cds	Chr1	75495270	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B49,D8
typical_cds_rare	Chr1	75495270	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B49,D8
typical_cds_rare	Chr1	75495273	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B49,D8
typical_cds_rare	Chr1	75495290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A20,B1
lof_cds	Chr1	75495323	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
typical_cds_rare	Chr1	75495323	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
lof_cds	Chr1	75495326	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
typical_cds_rare	Chr1	75495326	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
lof_cds	Chr1	75495333	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	95	A1,A14,A16,A18,A20,A22,A24,A25,A8,B1,B102,B104,B112,B114,B120,B123,B125,B13,B134,B138,B139,B15,B16,B17,B19,B2,B21,B25,B26,B27,B31,B34,B35,B36,B38,B39,B40,B41,B5,B51,B58,B60,B61,B66,B69,B7,B73,B74,B75,B77,B81,B82,B86,B87,B89,B9,B93,B94,B95,B99,C15,C18,C2,C21,C22,C23,C31,C34,C35,C36,C37,C38,C39,C44,C46,C49,C5,C51,C52,C56,C59,C6,C7,C70,C73,C74,C75,C79,C81,C82,C9,D1,D11,D5,D7
lof_cds	Chr1	75495336	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	133	A1,A14,A15,A16,A18,A20,A22,A24,A25,A4,A7,A8,A9,B1,B102,B103,B104,B108,B110,B111,B112,B113,B114,B117,B120,B123,B125,B126,B129,B134,B135,B138,B139,B15,B16,B17,B19,B2,B20,B21,B22,B24,B25,B26,B27,B3,B30,B31,B34,B35,B36,B37,B38,B39,B40,B41,B48,B5,B51,B52,B58,B60,B61,B63,B65,B66,B69,B73,B74,B75,B77,B79,B81,B82,B83,B86,B87,B89,B9,B93,B94,B95,B97,B99,C1,C12,C14,C15,C18,C2,C21,C22,C23,C26,C29,C31,C34,C35,C36,C37,C38,C39,C41,C44,C46,C47,C48,C49,C5,C51,C52,C54,C56,C59,C6,C60,C7,C70,C71,C73,C74,C75,C79,C81,C82,C85,C9,D1,D11,D4,D5,D7,D8
lof_cds	Chr1	75495338	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
typical_cds_rare	Chr1	75495338	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B108,C8
lof_cds	Chr1	75495461	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	15	A21,B137,B20,B48,B55,C27,C28,C30,C41,C48,C62,C71,C84,D10,D4
lof_cds	Chr1	75495464	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	15	A21,B137,B20,B48,B55,C27,C28,C30,C41,C48,C62,C71,C84,D10,D4
lof_cds	Chr1	75495465	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	15	A21,B137,B20,B48,B55,C27,C28,C30,C41,C48,C62,C71,C84,D10,D4
typical_cds_rare	Chr1	75495466	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A7,C78
lof_cds	Chr1	75495468	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A7,C78
typical_cds_rare	Chr1	75495468	GGC	G	INDEL	2bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A7,C78
typical_cds_rare	Chr1	75495499	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B135,C17
typical_cds_rare	Chr1	75495514	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B80
typical_cds_rare	Chr1	75495515	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B80
typical_cds_rare	Chr1	75495522	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	A16,B85,C13
lof_cds	Chr1	75495533	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B6
typical_cds_rare	Chr1	75495533	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B6
lof_cds	Chr1	75495539	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	A7,A8,B1,C15,C55
typical_cds_rare	Chr1	75495539	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	A7,A8,B1,C15,C55
typical_cds_rare	Chr1	75495540	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B104,B85
typical_cds_rare	Chr1	75495560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B49,B71
typical_cds_rare	Chr1	75495575	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B109
lof_cds	Chr1	75495594	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	17	A22,B101,B130,B22,B27,B29,B30,B91,C11,C19,C36,C38,C44,C57,C64,C66,D1
lof_cds	Chr1	75495596	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	14	A22,B101,B22,B27,B29,B30,B91,C36,C38,C44,C57,C64,C66,D1
lof_cds	Chr1	75495600	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	17	A22,B101,B22,B27,B29,B30,B91,C14,C20,C36,C38,C44,C49,C57,C64,C66,D1
lof_cds	Chr1	75495663	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B1,B133,B48,B60,B66
typical_cds_rare	Chr1	75495663	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B1,B133,B48,B60,B66
lof_cds	Chr1	75495665	A	AAC	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B56,B71
typical_cds_rare	Chr1	75495665	A	AAC	INDEL	2bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B56,B71
lof_cds	Chr1	75495666	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	42	A10,A21,A22,B101,B102,B107,B111,B130,B22,B27,B29,B30,B42,B43,B49,B5,B50,B52,B54,B57,B63,B65,B81,B86,B89,B91,B93,B97,C19,C26,C36,C38,C44,C47,C57,C64,C66,C69,C80,D1,D5,D8
lof_cds	Chr1	75495669	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	52	A10,A21,A22,B1,B101,B102,B107,B111,B128,B130,B133,B22,B27,B29,B30,B42,B43,B48,B49,B5,B50,B52,B54,B56,B57,B60,B63,B65,B66,B71,B81,B86,B87,B89,B91,B93,B97,C19,C26,C3,C36,C38,C44,C47,C57,C64,C66,C69,C80,D1,D5,D8
lof_cds	Chr1	75495691	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	22	A13,B113,B115,B125,B21,B31,B4,B46,B5,B58,B74,B77,C32,C33,C43,C50,C58,C68,C72,C77,C78,C83
typical_cds_rare	Chr1	75495695	TA	*	INDEL	1bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B70
lof_cds	Chr1	75495707	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	7	A21,A24,A4,B122,C54,C70,C80
typical_cds_rare	Chr1	75495716	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B122,B44,B67,C13,C79
lof_cds	Chr1	75495750	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A2,B28
typical_cds_rare	Chr1	75495750	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A2,B28
typical_cds_rare	Chr1	75495767	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B71,C62,C80
typical_cds_rare	Chr1	75495773	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A1,D8
typical_cds_rare	Chr1	75495794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	C59,C61
typical_cds_rare	Chr1	75495817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	A8,B95,C14,C29,C49
lof_cds	Chr1	75495846	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C29
typical_cds_rare	Chr1	75495846	AAC	A	INDEL	2bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C29
typical_cds_rare	Chr1	75495854	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B113,C29
typical_cds_rare	Chr1	75495899	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B108
lof_cds	Chr1	75495900	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C33
typical_cds_rare	Chr1	75495900	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C33
typical_cds_rare	Chr1	75495972	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B32,C20,C46
lof_cds	Chr1	75496066	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	6	A21,A5,B72,C42,C64,C66
lof_cds	Chr1	75496070	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	6	A21,A5,B72,C42,C64,C66
lof_cds	Chr1	75496092	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	72	A1,A16,A20,A22,A5,A8,B102,B103,B107,B108,B110,B111,B112,B113,B118,B12,B120,B121,B126,B128,B139,B15,B17,B2,B22,B23,B26,B27,B3,B30,B34,B36,B37,B41,B5,B50,B52,B61,B63,B64,B80,B81,B83,B86,B89,B9,B94,B95,B97,B99,C1,C22,C23,C29,C34,C38,C39,C45,C46,C47,C5,C54,C56,C58,C6,C63,C67,C73,C79,D1,D4,D8
lof_cds	Chr1	75496098	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	72	A1,A16,A20,A22,A5,A8,B102,B103,B107,B108,B110,B111,B112,B113,B118,B12,B120,B121,B126,B128,B139,B15,B17,B2,B22,B23,B26,B27,B3,B30,B34,B36,B37,B41,B5,B50,B52,B61,B63,B64,B80,B81,B83,B86,B89,B9,B94,B95,B97,B99,C1,C22,C23,C29,C34,C38,C39,C45,C46,C47,C5,C54,C56,C58,C6,C63,C67,C73,C79,D1,D4,D8
typical_cds_rare	Chr1	75496104	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B2,D7
typical_cds_rare	Chr1	75496105	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	A15,B31,C21,C36
typical_cds_rare	Chr1	75496144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A7,B47
typical_cds_rare	Chr1	75496177	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	C40,C50
typical_cds_rare	Chr1	75496188	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B33,B53
typical_cds_rare	Chr1	75496214	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B26
typical_cds_rare	Chr1	75496215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B108,B118,B127,B134,B56
typical_cds_rare	Chr1	75496217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B108
typical_cds_rare	Chr1	75496225	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B117
typical_cds_rare	Chr1	75496236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B108,B118,B127,B56
typical_cds_rare	Chr1	75496242	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B62
typical_cds_rare	Chr1	75496254	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	C4
typical_cds_rare	Chr1	75496267	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B29,B42,B7,D1
lof_cds	Chr1	75496276	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	17	A2,B105,B120,B125,B131,B133,B140,B66,B68,B78,B80,B84,B95,C16,C20,C77,D7
typical_cds_rare	Chr1	75496294	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B52,B57,C23
typical_cds_rare	Chr1	75496339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B52,B57,C23
typical_cds_rare	Chr1	75496344	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B25,B40,C21
typical_cds_rare	Chr1	75496348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B13
lof_cds	Chr1	75496356	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	47	A16,A18,A3,A4,A5,A6,A9,B101,B110,B120,B122,B124,B130,B2,B23,B30,B36,B45,B47,B49,B52,B6,B65,B67,B70,B71,B74,B76,B77,B88,B96,C10,C19,C25,C3,C43,C54,C57,C58,C6,C63,C67,C7,C74,C83,D3,D5
lof_cds	Chr1	75496397	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
typical_cds_rare	Chr1	75496397	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
lof_cds	Chr1	75496404	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
typical_cds_rare	Chr1	75496404	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
lof_cds	Chr1	75496407	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
typical_cds_rare	Chr1	75496407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B129
typical_cds_rare	Chr1	75496430	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B129,B48
typical_cds_rare	Chr1	75496435	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B129,B48
typical_cds_rare	Chr1	75496438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B13
typical_cds_rare	Chr1	75496440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A11,B29
typical_cds_rare	Chr1	75496443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B87,C22,C35,C48,C81
typical_cds_rare	Chr1	75496463	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B79
lof_cds	Chr1	75496472	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	60	A13,A15,A18,A2,A24,A8,B10,B102,B104,B105,B107,B108,B11,B128,B134,B136,B28,B33,B35,B45,B46,B53,B62,B69,B72,B74,B79,B8,B85,C1,C13,C15,C17,C2,C24,C28,C33,C38,C40,C49,C50,C53,C57,C59,C61,C72,C74,C76,C77,C78,C79,C8,C83,C85,D10,D11,D2,D4,D8,D9
lof_cds	Chr1	75496476	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	48	A13,A18,A2,A24,B102,B107,B108,B11,B128,B134,B136,B28,B33,B35,B45,B46,B53,B62,B69,B72,B74,B79,B8,C1,C13,C15,C2,C28,C33,C38,C40,C50,C57,C59,C61,C72,C74,C76,C77,C78,C79,C8,C83,C85,D10,D11,D2,D9
lof_cds	Chr1	75496479	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	13	A15,A8,B10,B105,B85,C17,C24,C33,C49,C53,C59,D4,D8
typical_cds_rare	Chr1	75496497	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	A2,B28
typical_cds_rare	Chr1	75496512	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B130,D9
typical_cds_rare	Chr1	75496548	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	A21,B34,B69,B76,C52
typical_cds_rare	Chr1	75496566	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B133,B48,B87,C4,C41
typical_cds_rare	Chr1	75496575	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B87,C22,C4,C41
lof_cds	Chr1	75496583	ATT	A	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	7	A18,B18,B31,B46,B69,C33,C68
typical_cds_rare	Chr1	75496612	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	A9,B24,B44,C4
typical_cds_rare	Chr1	75496643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	A9,B24,B44
typical_cds_rare	Chr1	75496656	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	5	B105,B13,B87,B88,C26
typical_cds_rare	Chr1	75496658	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	3	B128,B44,B94
typical_cds_rare	Chr1	75496680	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B44,C1
typical_cds_rare	Chr1	75496688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B109,B132,B133,B48
lof_cds	Chr1	75496690	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B15,B92,C24,D2
typical_cds_rare	Chr1	75496690	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B15,B92,C24,D2
typical_cds_rare	Chr1	75496752	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	2	B87,B88
typical_cds_rare	Chr1	75496793	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	4	B34,B52,C48,C6
lof_cds	Chr1	75496855	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B24
typical_cds_rare	Chr1	75496855	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131006256	SmilChr01G005987	131006256	rna-XM_057933438.1	1	B24