source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	75499490	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	47	A15,A22,A6,A7,B102,B105,B108,B117,B118,B135,B20,B22,B27,B28,B30,B35,B43,B46,B52,B63,B74,B81,B85,B89,B93,B94,C14,C18,C2,C24,C30,C33,C38,C45,C48,C49,C5,C53,C54,C59,C74,C8,C82,C9,D1,D7,D8
lof_cds	Chr1	75499496	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	45	A15,A22,A6,A7,B102,B105,B117,B118,B135,B20,B22,B27,B28,B30,B35,B43,B46,B52,B63,B74,B81,B85,B89,B93,B94,C14,C18,C2,C24,C30,C33,C38,C45,C48,C49,C5,C53,C54,C59,C74,C82,C9,D1,D7,D8
typical_cds_rare	Chr1	75499506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B28,B43,B63,B81
typical_cds_rare	Chr1	75499531	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C33
typical_cds_rare	Chr1	75499651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A24,B105,B26,B95,C33
typical_cds_rare	Chr1	75499741	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A6
typical_cds_rare	Chr1	75499880	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B5
typical_cds_rare	Chr1	75499888	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B14
typical_cds_rare	Chr1	75499941	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C15
typical_cds_rare	Chr1	75500000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C53
typical_cds_rare	Chr1	75500007	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	B3,C81
typical_cds_rare	Chr1	75500168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A1,A21,B117,B77,C71
typical_cds_rare	Chr1	75500335	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B9
typical_cds_rare	Chr1	75500356	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B130,B17,B80,C33,D7
typical_cds_rare	Chr1	75500477	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B100,B24,B77
typical_cds_rare	Chr1	75500550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C53
typical_cds_rare	Chr1	75500551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B128
typical_cds_rare	Chr1	75500605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B44,C13,C2
lof_cds	Chr1	75500614	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
typical_cds_rare	Chr1	75500614	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
typical_cds_rare	Chr1	75500635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A1,A14,A23,A7,D11
typical_cds_rare	Chr1	75500641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	A23,A7
typical_cds_rare	Chr1	75500654	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	A23,A7
lof_cds	Chr1	75500664	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
typical_cds_rare	Chr1	75500664	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
lof_cds	Chr1	75500669	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
typical_cds_rare	Chr1	75500669	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A23
typical_cds_rare	Chr1	75500694	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B26
typical_cds_rare	Chr1	75500737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A23,A7,B118,B37,C84
lof_cds	Chr1	75500742	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	17	A16,A3,B109,B113,B117,B20,B3,B34,B39,B52,B56,B96,C25,C48,C76,C81,D5
lof_cds	Chr1	75500818	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	159	A1,A11,A14,A15,A21,A22,A23,A24,A25,A4,A5,A7,A8,B1,B10,B100,B101,B102,B103,B104,B106,B107,B11,B111,B113,B114,B115,B118,B119,B12,B121,B124,B125,B126,B128,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B139,B14,B17,B18,B19,B20,B22,B23,B25,B26,B27,B30,B31,B32,B35,B36,B37,B4,B40,B41,B44,B47,B5,B50,B55,B58,B59,B6,B60,B63,B64,B65,B66,B69,B7,B70,B71,B74,B77,B79,B80,B81,B83,B85,B86,B87,B89,B90,B91,B92,B93,B94,B95,B97,B98,B99,C1,C10,C13,C14,C15,C19,C2,C20,C23,C24,C28,C29,C30,C31,C33,C35,C38,C39,C44,C45,C46,C47,C49,C5,C50,C53,C54,C55,C56,C58,C6,C60,C61,C62,C63,C64,C65,C66,C67,C7,C70,C72,C73,C74,C78,C79,C80,C81,C82,C86,C9,D1,D11,D3,D4,D5,D6,D7
lof_cds	Chr1	75500824	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A7,B118,B37,C50,C63
typical_cds_rare	Chr1	75500824	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A7,B118,B37,C50,C63
typical_cds_rare	Chr1	75500827	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	A20,B135,B61,C18
lof_cds	Chr1	75500849	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B124,B76,C21,C26,C7
typical_cds_rare	Chr1	75500849	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B124,B76,C21,C26,C7
lof_cds	Chr1	75500892	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B140,C31,D9
typical_cds_rare	Chr1	75500892	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B140,C31,D9
typical_cds_rare	Chr1	75500941	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	B140,C31
typical_cds_rare	Chr1	75500955	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	A9,B107
typical_cds_rare	Chr1	75500957	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B108,B123,B35,C23
typical_cds_rare	Chr1	75500971	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	B100,C57
typical_cds_rare	Chr1	75501005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	2	A6,C28
typical_cds_rare	Chr1	75501017	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A5
typical_cds_rare	Chr1	75501170	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	C24,C51,C55,C84
lof_cds	Chr1	75501218	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	25	A1,A10,A14,A20,B110,B138,B38,B39,B45,B63,B72,B82,B9,C18,C34,C36,C46,C52,C71,C72,C73,C8,C82,C85,D7
lof_cds	Chr1	75501252	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B121,C26,C7,C79
typical_cds_rare	Chr1	75501252	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B121,C26,C7,C79
lof_cds	Chr1	75501255	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A19
typical_cds_rare	Chr1	75501255	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A19
typical_cds_rare	Chr1	75501262	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B10,B41,B71,B79,B90
typical_cds_rare	Chr1	75501309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B81
typical_cds_rare	Chr1	75501323	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B97,C45,C50
typical_cds_rare	Chr1	75501338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B38,B39,B63
typical_cds_rare	Chr1	75501421	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A6,B35,B71,C23,C62
typical_cds_rare	Chr1	75501484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	D11
typical_cds_rare	Chr1	75501528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B111,C1,C60
lof_cds	Chr1	75501628	A	AAT	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B103,B135,B16,B17,B65
typical_cds_rare	Chr1	75501628	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B103,B135,B16,B17,B65
lof_cds	Chr1	75501629	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B103,B135,B16,B17,B65
typical_cds_rare	Chr1	75501629	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B103,B135,B16,B17,B65
lof_cds	Chr1	75501663	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	6	B103,B131,B135,B16,B17,B65
typical_cds_rare	Chr1	75501673	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B17,B29,C9
typical_cds_rare	Chr1	75501743	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B83
typical_cds_rare	Chr1	75501794	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	A22,C34,C56,C65
typical_cds_rare	Chr1	75501812	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C79
typical_cds_rare	Chr1	75501815	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	A21
typical_cds_rare	Chr1	75501816	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	B81
typical_cds_rare	Chr1	75501865	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	B117,B15,B20,B98,C48
lof_cds	Chr1	75501884	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	15	B121,B122,B124,B50,B66,B7,B76,B80,C21,C26,C32,C68,C7,C78,C79
lof_cds	Chr1	75502126	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B60,C22,C81,D3
typical_cds_rare	Chr1	75502126	G	GAT	INDEL	2bp_insertion	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B60,C22,C81,D3
lof_cds	Chr1	75502159	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	11	B108,B117,B127,B25,B28,B41,B67,C43,C51,C74,C82
typical_cds_rare	Chr1	75502217	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B12,B27,D1
typical_cds_rare	Chr1	75502218	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	1	C67
typical_cds_rare	Chr1	75502255	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	4	B32,B99,C20,C46
typical_cds_rare	Chr1	75502411	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	5	A9,B132,B68,B7,C59
lof_cds	Chr1	75502426	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	10	A14,B31,B48,B64,B70,B76,B93,B96,C21,C26
typical_cds_rare	Chr1	75502472	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006249	SmilChr01G005988	131006249	rna-XM_057933431.1	3	B135,B28,C9