source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	75546960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B96,C11,C65,C9
typical_cds_rare	Chr1	75546989	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	B96,C11,C9
typical_cds_rare	Chr1	75547018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	C59,C61
lof_cds	Chr1	75547023	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B8,B94
typical_cds_rare	Chr1	75547023	T	TTC	INDEL	2bp_insertion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B8,B94
lof_cds	Chr1	75547029	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A19,B105,B29,C40
typical_cds_rare	Chr1	75547029	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A19,B105,B29,C40
typical_cds_rare	Chr1	75547031	AGT	*	INDEL	2bp_deletion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B74,C60,C61,D2
lof_cds	Chr1	75547074	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547074	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
lof_cds	Chr1	75547078	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547078	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547083	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547099	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547118	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B60,B66,B87,C81
typical_cds_rare	Chr1	75547143	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	5	B101,B117,B20,C48,C82
typical_cds_rare	Chr1	75547153	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A3,B39,B79,C31
typical_cds_rare	Chr1	75547164	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	C11,C69
typical_cds_rare	Chr1	75547177	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	5	B15,B72,B79,C42,C62
typical_cds_rare	Chr1	75547203	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B72,B79,C42,C62
typical_cds_rare	Chr1	75547220	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B101,C30
typical_cds_rare	Chr1	75547362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	B117,B20,C48
lof_cds	Chr1	75547371	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	C65
typical_cds_rare	Chr1	75547371	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	C65
lof_cds	Chr1	75547388	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	25	A21,A25,B1,B117,B129,B19,B20,B35,B55,B60,B66,B69,B73,B74,C15,C22,C35,C48,C60,C74,C81,D11,D3,D5,D7
lof_cds	Chr1	75547391	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	25	A21,A25,B1,B117,B129,B19,B20,B35,B55,B60,B66,B69,B73,B74,C15,C22,C35,C48,C60,C74,C81,D11,D3,D5,D7
lof_cds	Chr1	75547417	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	49	A21,A25,A6,B1,B101,B117,B121,B129,B130,B19,B20,B26,B35,B42,B43,B46,B55,B60,B66,B69,B71,B74,B81,B87,B90,B91,B92,C11,C15,C22,C30,C35,C36,C48,C60,C62,C65,C69,C71,C74,C80,C81,C82,D10,D11,D3,D5,D7,D9
typical_cds_rare	Chr1	75547428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	B117,B20,C48
typical_cds_rare	Chr1	75547513	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	C35,D5
typical_cds_rare	Chr1	75547545	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	B3,B83,C49
lof_cds	Chr1	75547621	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A2,A3,C16,C53
typical_cds_rare	Chr1	75547621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A2,A3,C16,C53
lof_cds	Chr1	75547658	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B130,C19
typical_cds_rare	Chr1	75547658	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B130,C19
typical_cds_rare	Chr1	75547673	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B74
typical_cds_rare	Chr1	75547773	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B20,D1
typical_cds_rare	Chr1	75547777	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B20,C35,C74,D1
typical_cds_rare	Chr1	75547779	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	A4,B42,C57
typical_cds_rare	Chr1	75547819	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B20
typical_cds_rare	Chr1	75547843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B13
typical_cds_rare	Chr1	75547878	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B42
lof_cds	Chr1	75547906	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A4,B102,B130,C74
typical_cds_rare	Chr1	75547906	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	A4,B102,B130,C74
typical_cds_rare	Chr1	75547949	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	B1,B61,C17
typical_cds_rare	Chr1	75547993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	C61
lof_cds	Chr1	75548004	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	33	A23,A5,B112,B120,B127,B128,B15,B18,B19,B37,B49,B5,B54,B57,B58,B62,B63,B7,B77,B82,B84,B88,B95,B97,C1,C16,C3,C34,C39,C5,C54,C57,C9
typical_cds_rare	Chr1	75548009	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B3,B71
typical_cds_rare	Chr1	75548109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	D11
typical_cds_rare	Chr1	75548138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B114,B74
typical_cds_rare	Chr1	75548158	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B74,C19,C28,C57
typical_cds_rare	Chr1	75548168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	5	A11,A18,A25,B11,C62
typical_cds_rare	Chr1	75548187	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B56,B96
typical_cds_rare	Chr1	75548215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B1
lof_cds	Chr1	75548398	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	12	B1,B130,B17,B24,B74,B9,C14,C2,C26,C75,D10,D5
lof_cds	Chr1	75548411	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	25	A15,A6,B117,B121,B130,B20,B42,B43,B46,B56,B7,B81,B90,B92,B96,C11,C30,C48,C62,C65,C69,C80,C82,C9,D9
lof_cds	Chr1	75548415	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	11	B1,B118,B17,B24,B71,C14,C2,C45,C75,C77,D10
lof_cds	Chr1	75548491	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	8	A5,B36,B68,B83,C61,C68,C78,D5
lof_cds	Chr1	75548502	G	GAT	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	17	A25,A9,B1,B102,B114,B19,B39,B60,B61,B69,B74,B79,B87,C17,C31,C35,D7
lof_cds	Chr1	75548507	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	17	A16,A25,A9,B1,B102,B114,B120,B19,B61,B69,B74,B79,B87,C17,C31,C35,D7
lof_cds	Chr1	75548509	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	15	A25,A9,B1,B102,B114,B19,B61,B69,B74,B79,B87,C17,C31,C35,D7
typical_cds_rare	Chr1	75548582	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B61,C17
lof_cds	Chr1	75548596	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	29	A15,A6,B117,B118,B121,B130,B20,B42,B43,B46,B56,B7,B71,B81,B90,B92,B96,C11,C30,C45,C48,C62,C65,C69,C80,C82,C9,D10,D9
lof_cds	Chr1	75548597	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	16	A11,A18,B100,B11,B137,B16,B18,B45,B8,B80,B88,B97,C34,C43,C77,C87
lof_cds	Chr1	75548598	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	16	A11,A18,B11,B137,B16,B18,B45,B74,B8,B80,B88,B97,C34,C43,C77,C87
lof_cds	Chr1	75548601	TTA	T	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	27	A13,A9,B102,B114,B12,B19,B24,B27,B42,B44,B60,B61,B69,B74,B79,B99,C15,C17,C20,C31,C35,C46,C59,C61,D1,D5,D7
lof_cds	Chr1	75548602	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	28	A15,A6,B117,B118,B121,B130,B20,B43,B46,B56,B7,B71,B81,B90,B92,B96,C11,C30,C45,C48,C62,C65,C69,C80,C82,C9,D10,D9
typical_cds_rare	Chr1	75548636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	A18,B11,C77
lof_cds	Chr1	75548656	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	11	B102,B113,B46,C22,C37,C4,C54,C59,C82,D11,D9
typical_cds_rare	Chr1	75548663	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	A18,C77
typical_cds_rare	Chr1	75548702	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	C45,D10
lof_cds	Chr1	75548745	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	33	A21,A25,B1,B101,B122,B128,B129,B133,B15,B19,B28,B48,B5,B52,B55,B60,B66,B70,B73,B87,B91,B93,B98,C15,C21,C35,C36,C49,C52,C60,C81,D3,D5
lof_cds	Chr1	75548746	GTC	G	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	19	A21,B101,B122,B128,B133,B15,B28,B5,B52,B55,B70,B73,B91,B93,B98,C21,C36,C49,C52
lof_cds	Chr1	75548792	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B1,B48,B76,C17
typical_cds_rare	Chr1	75548792	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	4	B1,B48,B76,C17
typical_cds_rare	Chr1	75548799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	3	A21,B55,B73
lof_cds	Chr1	75548804	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B22
typical_cds_rare	Chr1	75548804	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B22
typical_cds_rare	Chr1	75548837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	2	B132,B22
typical_cds_rare	Chr1	75548881	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B22
typical_cds_rare	Chr1	75548934	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B123
typical_cds_rare	Chr1	75548938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013614	SmilChr01G005996	131013614	rna-XM_057941749.1	1	B123