source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	75553080	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	72	A1,A14,A15,A18,A20,A21,A22,A24,A7,B108,B113,B117,B119,B123,B124,B126,B134,B135,B14,B2,B20,B23,B26,B28,B31,B38,B39,B40,B41,B42,B43,B44,B51,B56,B59,B63,B67,B69,B73,B74,B76,B77,B81,B83,B87,B93,B95,B96,B97,C1,C10,C13,C14,C15,C17,C21,C24,C33,C35,C36,C48,C5,C57,C70,C71,C74,C76,C8,C82,C84,C87,C9
lof_cds	Chr1	75553086	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	69	A1,A14,A15,A18,A20,A21,A22,A24,A7,B108,B113,B117,B119,B123,B124,B126,B134,B135,B14,B2,B20,B23,B26,B28,B31,B38,B39,B40,B41,B42,B43,B44,B51,B56,B59,B63,B67,B69,B73,B74,B76,B77,B81,B83,B87,B93,B96,B97,C1,C10,C13,C14,C15,C17,C21,C24,C33,C35,C36,C48,C57,C70,C71,C74,C76,C82,C84,C87,C9
typical_cds_rare	Chr1	75553129	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C48
typical_cds_rare	Chr1	75553152	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B95,C27,C78,C9
lof_cds	Chr1	75553168	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A10
typical_cds_rare	Chr1	75553168	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A10
typical_cds_rare	Chr1	75553190	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	C19,C33
typical_cds_rare	Chr1	75553216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B114,B39,B79
lof_cds	Chr1	75553223	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B123,B4,C67,D3
typical_cds_rare	Chr1	75553223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B123,B4,C67,D3
typical_cds_rare	Chr1	75553244	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B108,C8,D10
typical_cds_rare	Chr1	75553250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B105,B29,B67,B76
typical_cds_rare	Chr1	75553291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B124,C19,C32,C33,C34
lof_cds	Chr1	75553304	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	A13,B107,B128
typical_cds_rare	Chr1	75553304	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	A13,B107,B128
typical_cds_rare	Chr1	75553328	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	C19,C33
typical_cds_rare	Chr1	75553333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B32,B99,C20,C46
lof_cds	Chr1	75553334	CGG	C	INDEL	2bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	16	A13,A7,B10,B101,B125,B132,B139,B29,B57,B73,B86,B97,C40,C47,C66,C87
lof_cds	Chr1	75553337	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	16	A13,A7,B10,B101,B125,B132,B139,B29,B57,B73,B86,B97,C40,C47,C66,C87
typical_cds_rare	Chr1	75553357	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	C19,C33,C7
typical_cds_rare	Chr1	75553377	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B42,B55,B63,B65
typical_cds_rare	Chr1	75553388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A13,B35
typical_cds_rare	Chr1	75553402	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	C33,C7
typical_cds_rare	Chr1	75553470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B5
lof_cds	Chr1	75553501	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C34
typical_cds_rare	Chr1	75553501	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C34
lof_cds	Chr1	75553504	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C34
typical_cds_rare	Chr1	75553504	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C34
typical_cds_rare	Chr1	75553514	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	C11,C34,C48,C69
typical_cds_rare	Chr1	75553530	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C57
typical_cds_rare	Chr1	75553531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B11,B45,B72,C15,C72
typical_cds_rare	Chr1	75553572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B140
typical_cds_rare	Chr1	75553578	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C71
typical_cds_rare	Chr1	75553590	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C53
typical_cds_rare	Chr1	75553591	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	A21,B77,B81,B83
typical_cds_rare	Chr1	75553715	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	D10,D11
lof_cds	Chr1	75553859	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	69	A19,A20,A25,A7,B101,B104,B110,B121,B125,B127,B130,B136,B137,B138,B140,B17,B22,B27,B36,B45,B51,B54,B58,B63,B64,B66,B69,B7,B70,B71,B72,B81,B82,B83,B84,B85,B9,B91,B94,B95,C10,C13,C14,C18,C22,C24,C26,C31,C32,C34,C44,C47,C48,C49,C51,C52,C55,C59,C6,C62,C69,C71,C72,C78,C84,C85,D11,D4,D9
typical_cds_rare	Chr1	75553868	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B24,B83
typical_cds_rare	Chr1	75553877	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A5,B53
typical_cds_rare	Chr1	75553894	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A10,B2
typical_cds_rare	Chr1	75553918	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B136,B140,B63,B83,D9
typical_cds_rare	Chr1	75553919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	D7
typical_cds_rare	Chr1	75553922	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B100,B24
lof_cds	Chr1	75553941	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B22,C55,C6
typical_cds_rare	Chr1	75553941	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B22,C55,C6
typical_cds_rare	Chr1	75553945	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B9,C18,C34,C45
lof_cds	Chr1	75553951	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B22,C55,C6
typical_cds_rare	Chr1	75553951	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B22,C55,C6
lof_cds	Chr1	75553994	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B9,C18,C34,C45,C74
typical_cds_rare	Chr1	75553994	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B9,C18,C34,C45,C74
typical_cds_rare	Chr1	75554053	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A5
typical_cds_rare	Chr1	75554141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B128
lof_cds	Chr1	75554245	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A11,B59
typical_cds_rare	Chr1	75554245	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A11,B59
typical_cds_rare	Chr1	75554261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B123,C82
typical_cds_rare	Chr1	75554284	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B26
lof_cds	Chr1	75554332	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	14	A16,A3,B109,B117,B120,B20,B3,B34,B52,B56,C25,C6,C81,D5
typical_cds_rare	Chr1	75554359	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A21
typical_cds_rare	Chr1	75554422	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B95,C11,C69
typical_cds_rare	Chr1	75554423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B10,B113
lof_cds	Chr1	75554439	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B124,B76,C21
typical_cds_rare	Chr1	75554439	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B124,B76,C21
lof_cds	Chr1	75554462	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	37	A19,A5,A6,B103,B110,B112,B121,B122,B22,B27,B3,B34,B36,B45,B49,B52,B61,B65,B67,B72,B74,B88,B89,B9,C10,C41,C42,C44,C49,C57,C58,C6,C74,C83,C86,D1,D4
lof_cds	Chr1	75554482	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C15
typical_cds_rare	Chr1	75554482	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C15
typical_cds_rare	Chr1	75554530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B136,B139,C1
typical_cds_rare	Chr1	75554555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	A23,B114,C40
typical_cds_rare	Chr1	75554595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A6
typical_cds_rare	Chr1	75554676	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B121,B124,C21
lof_cds	Chr1	75554808	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	7	A20,B82,B9,C1,C46,C52,C72
typical_cds_rare	Chr1	75554837	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B94
typical_cds_rare	Chr1	75554855	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B128
typical_cds_rare	Chr1	75554903	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B43
typical_cds_rare	Chr1	75554912	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	A20,B72
typical_cds_rare	Chr1	75554928	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B117,B38
typical_cds_rare	Chr1	75554944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B102,C59
typical_cds_rare	Chr1	75554961	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	4	B44,B87,C13,C2
typical_cds_rare	Chr1	75555011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B35,B71
typical_cds_rare	Chr1	75555089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	A1,A16,B55,B64,C14
typical_cds_rare	Chr1	75555140	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	A5
typical_cds_rare	Chr1	75555194	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	C49
typical_cds_rare	Chr1	75555263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B17,B29,C9
typical_cds_rare	Chr1	75555348	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B25,B55,B61
typical_cds_rare	Chr1	75555364	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B77,C31,C4
typical_cds_rare	Chr1	75555384	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	D11
typical_cds_rare	Chr1	75555392	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B26
lof_cds	Chr1	75555474	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	6	B136,B77,C15,C31,D11,D9
lof_cds	Chr1	75555749	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	14	A19,A25,B109,B135,B2,B38,B41,B58,B91,B97,B98,C17,C31,C84
typical_cds_rare	Chr1	75555864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	1	B104
typical_cds_rare	Chr1	75555878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	A22,B121,C21
typical_cds_rare	Chr1	75555977	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B122,B90,C30
typical_cds_rare	Chr1	75556001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B132,C59
lof_cds	Chr1	75556016	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B56,C21
typical_cds_rare	Chr1	75556016	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	2	B56,C21
lof_cds	Chr1	75556041	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	7	A13,B112,B89,C39,C56,C71,C82
typical_cds_rare	Chr1	75556057	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	5	B122,B132,B54,B90,D3
typical_cds_rare	Chr1	75556062	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006248	SmilChr01G005997	131006248	rna-XM_057933430.1	3	B135,C18,C9