source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	75590076	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C71
lof_cds	Chr1	75590133	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	9	A6,A7,B111,B117,B48,C17,C27,C48,C82
typical_cds_rare	Chr1	75590145	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C61
typical_cds_rare	Chr1	75590158	AGT	*	INDEL	2bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	A21
typical_cds_rare	Chr1	75590186	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C28
typical_cds_rare	Chr1	75590196	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	B110,B52,B66,B80,C60
lof_cds	Chr1	75590201	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	9	B1,B129,B60,B66,B87,C15,C22,C49,D5
lof_cds	Chr1	75590205	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	9	B1,B129,B60,B66,B87,C15,C22,C49,D5
typical_cds_rare	Chr1	75590238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B106,C7
typical_cds_rare	Chr1	75590280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	A3,B38,B39,B4,B43
typical_cds_rare	Chr1	75590301	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	B113,C19,C22
typical_cds_rare	Chr1	75590347	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	B101,B108,B91,C30,C8
typical_cds_rare	Chr1	75590422	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B36,B52
lof_cds	Chr1	75590497	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	72	A15,A16,A19,A2,A25,A3,A9,B102,B106,B11,B110,B114,B115,B120,B128,B129,B13,B135,B15,B17,B19,B20,B27,B28,B29,B35,B36,B38,B39,B43,B52,B60,B66,B67,B68,B69,B74,B79,B80,B81,B9,B98,C15,C16,C17,C18,C19,C22,C26,C31,C32,C34,C35,C42,C48,C49,C53,C54,C56,C59,C6,C60,C61,C65,C68,C74,C81,D10,D3,D4,D5,D7
lof_cds	Chr1	75590500	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	46	A16,A19,A2,A25,A3,A9,B102,B106,B114,B120,B128,B15,B17,B19,B27,B29,B36,B38,B39,B52,B60,B68,B69,B79,B81,B98,C16,C22,C26,C31,C32,C34,C42,C48,C49,C53,C54,C56,C60,C65,C68,C74,C81,D3,D5,D7
lof_cds	Chr1	75590543	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	27	A13,A23,B105,B112,B139,B14,B18,B21,B32,B58,B7,B76,B84,B86,B91,B97,C1,C13,C29,C3,C39,C46,C7,C72,C77,C83,C87
typical_cds_rare	Chr1	75590641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B74,B9,C57,C74
typical_cds_rare	Chr1	75590687	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B74,B9,C57,C74
typical_cds_rare	Chr1	75590744	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B132,B136,B96,D7
lof_cds	Chr1	75590779	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590779	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
lof_cds	Chr1	75590782	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590782	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
lof_cds	Chr1	75590785	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B130,C19
typical_cds_rare	Chr1	75590785	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B130,C19
typical_cds_rare	Chr1	75590787	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B29,C28
lof_cds	Chr1	75590805	CTT	C	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590805	CTT	C	INDEL	2bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
lof_cds	Chr1	75590809	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590809	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
lof_cds	Chr1	75590818	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590818	A	AAG	INDEL	2bp_insertion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C59,C61
typical_cds_rare	Chr1	75590841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C34
typical_cds_rare	Chr1	75590904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B55,B71,C36,C74
typical_cds_rare	Chr1	75590970	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C36
typical_cds_rare	Chr1	75591012	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B102,B56,B96,C14
typical_cds_rare	Chr1	75591083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C85
typical_cds_rare	Chr1	75591141	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	B7
typical_cds_rare	Chr1	75591288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	D11
typical_cds_rare	Chr1	75591296	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	B117,B20,C48
typical_cds_rare	Chr1	75591350	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	D11
typical_cds_rare	Chr1	75591353	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B98,C54
lof_cds	Chr1	75591370	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C22,C35
typical_cds_rare	Chr1	75591370	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	C22,C35
lof_cds	Chr1	75591371	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B46,C49
typical_cds_rare	Chr1	75591371	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B46,C49
typical_cds_rare	Chr1	75591388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B46,C19
typical_cds_rare	Chr1	75591404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	4	B12,B44,C59,C61
lof_cds	Chr1	75591504	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	B16
typical_cds_rare	Chr1	75591504	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	B16
lof_cds	Chr1	75591525	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	C19,C26,C28,C74,D5
typical_cds_rare	Chr1	75591525	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	C19,C26,C28,C74,D5
lof_cds	Chr1	75591527	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	C19,C26,C28,C74,D5
typical_cds_rare	Chr1	75591527	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	C19,C26,C28,C74,D5
lof_cds	Chr1	75591543	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C28
typical_cds_rare	Chr1	75591543	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C28
lof_cds	Chr1	75591544	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	21	A2,A25,A5,B28,B34,B80,B9,C17,C19,C35,C5,C56,C6,C60,C61,C74,C75,C78,C81,D4,D5
lof_cds	Chr1	75591551	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	18	A2,A25,A5,B28,B34,B80,B9,C17,C35,C5,C56,C6,C60,C61,C75,C78,C81,D4
lof_cds	Chr1	75591556	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	C19,C74,D5
typical_cds_rare	Chr1	75591556	G	GC	INDEL	1bp_insertion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	C19,C74,D5
lof_cds	Chr1	75591590	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	23	A2,A25,A5,B120,B130,B28,B34,B68,B80,B9,C17,C35,C49,C5,C6,C60,C61,C74,C75,C78,C81,D4,D5
lof_cds	Chr1	75591635	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	11	B20,B29,B32,B44,B99,C20,C48,C59,C61,C82,D1
lof_cds	Chr1	75591637	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	42	A11,A2,A21,A25,A3,A5,B11,B110,B114,B115,B120,B121,B129,B130,B17,B27,B28,B36,B52,B60,B67,B68,B80,B81,B9,C16,C17,C22,C30,C32,C35,C49,C5,C53,C6,C61,C74,C75,C78,C81,D4,D5
typical_cds_rare	Chr1	75591692	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	C19,C28,C57,C74,D5
typical_cds_rare	Chr1	75591716	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B20,D1
typical_cds_rare	Chr1	75591790	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B26,B8
lof_cds	Chr1	75591822	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	B12
typical_cds_rare	Chr1	75591822	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	B12
lof_cds	Chr1	75591826	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	B118,C45,D10
typical_cds_rare	Chr1	75591826	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	B118,C45,D10
lof_cds	Chr1	75591827	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	9	B102,B119,B38,B39,B47,B56,B96,C41,D7
lof_cds	Chr1	75591830	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	9	B102,B119,B38,B39,B47,B56,B96,C41,D7
typical_cds_rare	Chr1	75591964	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	5	B104,B16,B72,B86,C72
typical_cds_rare	Chr1	75591975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	3	B101,B82,C8
typical_cds_rare	Chr1	75592040	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	1	C26
lof_cds	Chr1	75592069	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	6	B56,B7,B96,C11,C65,C69
lof_cds	Chr1	75592113	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	8	B139,B50,B65,B67,C17,C39,C50,C74
lof_cds	Chr1	75592135	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B34,B7
typical_cds_rare	Chr1	75592135	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131013656	SmilChr01G006001	131013656	rna-XM_057941783.1	2	B34,B7