source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	75602008	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C28
typical_cds_rare	Chr1	75602029	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B44,C20,C7
typical_cds_rare	Chr1	75602048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	A6,B130,B42,B43,C82
typical_cds_rare	Chr1	75602050	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B61
typical_cds_rare	Chr1	75602073	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B95
typical_cds_rare	Chr1	75602104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B13,B83,C21
typical_cds_rare	Chr1	75602188	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C28
lof_cds	Chr1	75602210	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B59
typical_cds_rare	Chr1	75602210	C	CGA	INDEL	2bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B59
lof_cds	Chr1	75602220	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C50
typical_cds_rare	Chr1	75602220	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C50
typical_cds_rare	Chr1	75602232	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	B49,B51,C50,C51,C54
typical_cds_rare	Chr1	75602327	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C7
typical_cds_rare	Chr1	75602343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C1
typical_cds_rare	Chr1	75602346	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B136,C21
typical_cds_rare	Chr1	75602351	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	C1,D11
typical_cds_rare	Chr1	75602423	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	B41,B75,C19,C51
typical_cds_rare	Chr1	75602425	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	B41,B75,C19,C51
lof_cds	Chr1	75602426	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	D11
typical_cds_rare	Chr1	75602426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	D11
typical_cds_rare	Chr1	75602442	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	B41,B75,C19,C51
typical_cds_rare	Chr1	75602505	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	A23,B118,B41,C51,C71
typical_cds_rare	Chr1	75602522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	A23,B118,C51
typical_cds_rare	Chr1	75602534	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B113
typical_cds_rare	Chr1	75602552	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	C59,C61
typical_cds_rare	Chr1	75602589	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B139
typical_cds_rare	Chr1	75602592	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	C15,C21,C26
typical_cds_rare	Chr1	75602596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	C15,C21,C26
lof_cds	Chr1	75602599	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C26
typical_cds_rare	Chr1	75602599	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C26
typical_cds_rare	Chr1	75602619	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B44,B59,C7
lof_cds	Chr1	75602621	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B139
typical_cds_rare	Chr1	75602621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B139
typical_cds_rare	Chr1	75602626	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	A21,B139,B59,C50,C7
lof_cds	Chr1	75602667	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	33	A3,B110,B124,B2,B36,B44,B49,B52,B6,B65,B67,B70,B71,B76,B77,B99,C10,C19,C20,C25,C3,C42,C43,C57,C58,C59,C6,C61,C67,C7,C74,C83,D11
lof_cds	Chr1	75602672	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	32	A3,B110,B124,B2,B29,B36,B44,B49,B52,B6,B65,B67,B70,B71,B76,B99,C10,C19,C20,C25,C3,C42,C43,C57,C58,C59,C6,C61,C67,C74,C83,D11
typical_cds_rare	Chr1	75602705	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B59,C50,C7
typical_cds_rare	Chr1	75602716	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	A11,B29
typical_cds_rare	Chr1	75602728	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B111
typical_cds_rare	Chr1	75602780	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C83
typical_cds_rare	Chr1	75602816	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C81
typical_cds_rare	Chr1	75602825	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	A11,B29
lof_cds	Chr1	75602862	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
typical_cds_rare	Chr1	75602862	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
lof_cds	Chr1	75602865	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
typical_cds_rare	Chr1	75602865	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
lof_cds	Chr1	75602868	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B39
typical_cds_rare	Chr1	75602868	G	GA	INDEL	1bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B39
typical_cds_rare	Chr1	75602895	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	A21
typical_cds_rare	Chr1	75602904	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B104
typical_cds_rare	Chr1	75602961	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	B104,B39,C20,C28
lof_cds	Chr1	75603012	CTG	C	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	A6,B130,B43,C82
typical_cds_rare	Chr1	75603012	CTG	C	INDEL	2bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	A6,B130,B43,C82
lof_cds	Chr1	75603015	A	ATT	INDEL	2bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	A6,B130,B43,C82
typical_cds_rare	Chr1	75603015	A	ATT	INDEL	2bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	4	A6,B130,B43,C82
typical_cds_rare	Chr1	75603039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B39
typical_cds_rare	Chr1	75603070	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B62
lof_cds	Chr1	75603131	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B38,B39,B61
typical_cds_rare	Chr1	75603131	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B38,B39,B61
lof_cds	Chr1	75603134	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	51	A15,A16,A18,A25,A4,A5,B102,B109,B120,B122,B124,B127,B135,B14,B2,B21,B35,B41,B45,B51,B53,B59,B61,B64,B69,B71,B73,B74,B8,B91,B93,B94,B95,B98,B99,C12,C23,C24,C29,C30,C42,C56,C6,C62,C7,C71,C75,C79,C82,D10,D2
lof_cds	Chr1	75603140	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	53	A15,A18,A25,A4,A5,B102,B109,B120,B122,B124,B127,B135,B14,B2,B21,B30,B35,B41,B45,B51,B53,B59,B61,B64,B69,B71,B73,B74,B8,B91,B93,B94,B95,B98,B99,C12,C20,C23,C24,C29,C30,C42,C56,C6,C62,C7,C71,C75,C79,C82,C87,D10,D2
typical_cds_rare	Chr1	75603151	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	A5
typical_cds_rare	Chr1	75603196	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	C24,C78
lof_cds	Chr1	75603198	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	10	A7,B132,B14,B33,B46,B87,B99,C28,C74,C84
lof_cds	Chr1	75603207	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	11	A7,B109,B132,B14,B33,B46,B87,B99,C28,C74,C84
typical_cds_rare	Chr1	75603239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B127,B95
lof_cds	Chr1	75603278	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C85
typical_cds_rare	Chr1	75603278	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C85
typical_cds_rare	Chr1	75603342	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B38,B39,B61
lof_cds	Chr1	75603371	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B127
typical_cds_rare	Chr1	75603371	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B127
typical_cds_rare	Chr1	75603405	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B62,C36
lof_cds	Chr1	75603409	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C36
typical_cds_rare	Chr1	75603409	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C36
typical_cds_rare	Chr1	75603479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C28
typical_cds_rare	Chr1	75603484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C28
typical_cds_rare	Chr1	75603499	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	B121,B37,B83,C45,C6
typical_cds_rare	Chr1	75603537	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C1
typical_cds_rare	Chr1	75603581	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B132,B91,C36
typical_cds_rare	Chr1	75603583	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C14
typical_cds_rare	Chr1	75603682	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B121
typical_cds_rare	Chr1	75603707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B18
typical_cds_rare	Chr1	75603843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
lof_cds	Chr1	75603846	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C84
typical_cds_rare	Chr1	75603846	AGC	A	INDEL	2bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C84
lof_cds	Chr1	75603872	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
typical_cds_rare	Chr1	75603872	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B31
typical_cds_rare	Chr1	75603901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	A14,B22,B36,B58,B75
typical_cds_rare	Chr1	75603904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	A14,B22,B36,B58,B75
typical_cds_rare	Chr1	75603978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C14
lof_cds	Chr1	75603985	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	24	A13,A4,A6,B107,B111,B119,B12,B128,B13,B132,B50,B73,B74,B87,B88,B91,B93,B99,C45,C57,C59,C72,C74,C87
typical_cds_rare	Chr1	75604003	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C62
typical_cds_rare	Chr1	75604070	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C6
typical_cds_rare	Chr1	75604176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B103,C78
typical_cds_rare	Chr1	75604211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	D11
typical_cds_rare	Chr1	75604296	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	A23
typical_cds_rare	Chr1	75604310	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	D11
typical_cds_rare	Chr1	75604319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B55
typical_cds_rare	Chr1	75604398	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B1
typical_cds_rare	Chr1	75604478	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B15,B43
lof_cds	Chr1	75604482	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B112
typical_cds_rare	Chr1	75604482	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	B112
lof_cds	Chr1	75604488	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B87,C33
typical_cds_rare	Chr1	75604488	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B87,C33
lof_cds	Chr1	75604493	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C33
typical_cds_rare	Chr1	75604493	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	C33
typical_cds_rare	Chr1	75604502	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	5	B127,B8,B88,C4,C62
typical_cds_rare	Chr1	75604579	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B60,B66
typical_cds_rare	Chr1	75604596	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	1	A10
typical_cds_rare	Chr1	75604608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	C28,C75
typical_cds_rare	Chr1	75604613	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	2	B134,C87
lof_cds	Chr1	75604617	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B36,C34,C65
typical_cds_rare	Chr1	75604617	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131013662	SmilChr01G006003	131013662	rna-XM_057941791.1	3	B36,C34,C65