source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr1	75813626	AGC	A	INDEL	2bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	117	A14,A15,A16,A24,A25,A3,A6,A7,A9,B100,B104,B106,B108,B110,B112,B115,B117,B119,B12,B120,B121,B123,B124,B125,B127,B129,B130,B131,B132,B135,B136,B137,B138,B14,B15,B17,B18,B20,B24,B28,B29,B3,B31,B32,B34,B4,B40,B41,B44,B45,B46,B47,B54,B55,B57,B62,B63,B64,B65,B66,B70,B71,B73,B78,B8,B82,B84,B86,B9,B90,B92,B93,B95,C10,C12,C15,C16,C17,C18,C19,C23,C24,C25,C26,C27,C3,C31,C33,C34,C37,C39,C41,C42,C43,C44,C45,C5,C50,C51,C53,C55,C56,C58,C6,C66,C70,C72,C73,C77,C78,C84,C86,C87,C9,D3,D8,D9
lof_cds	Chr1	75813632	C	CAA	INDEL	2bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	116	A14,A15,A16,A24,A25,A3,A5,A6,A9,B100,B104,B106,B110,B112,B115,B117,B119,B12,B120,B121,B123,B124,B125,B127,B129,B130,B131,B132,B135,B136,B137,B138,B14,B15,B17,B18,B20,B24,B28,B29,B3,B31,B32,B34,B4,B40,B41,B44,B45,B46,B47,B54,B55,B57,B62,B63,B64,B65,B66,B70,B71,B73,B78,B8,B82,B84,B86,B9,B90,B92,B93,B95,C10,C12,C14,C15,C16,C17,C18,C19,C23,C24,C25,C26,C27,C3,C31,C33,C34,C37,C39,C41,C42,C43,C44,C45,C5,C50,C51,C53,C55,C56,C58,C6,C66,C72,C73,C77,C78,C84,C86,C87,C9,D3,D8,D9
lof_cds	Chr1	75813684	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	3	B106,B28,C31
typical_cds_rare	Chr1	75813684	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	3	B106,B28,C31
typical_cds_rare	Chr1	75813688	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	4	B31,B32,B45,B92
typical_cds_rare	Chr1	75813712	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	4	A21,B101,B2,C59
typical_cds_rare	Chr1	75814097	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	3	B13,B17,C48
typical_cds_rare	Chr1	75815115	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	B111
typical_cds_rare	Chr1	75815126	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	B86
typical_cds_rare	Chr1	75815525	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	C52
typical_cds_rare	Chr1	75815878	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	3	B56,B96,C71
typical_cds_rare	Chr1	75816086	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	A23
typical_cds_rare	Chr1	75816087	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	4	B59,B60,B71,C62
lof_cds	Chr1	75816110	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	B134
typical_cds_rare	Chr1	75816110	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	B134
typical_cds_rare	Chr1	75816249	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	D11
typical_cds_rare	Chr1	75816315	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	B139
lof_cds	Chr1	75816472	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	14	A8,B101,B11,B115,B122,B2,B20,B48,B83,B91,C36,C65,C80,D4
lof_cds	Chr1	75816475	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	14	A8,B101,B11,B115,B122,B2,B20,B48,B83,B91,C36,C65,C80,D4
lof_cds	Chr1	75816491	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	8	B11,B115,B122,B20,B48,C65,C80,D4
lof_cds	Chr1	75816495	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	8	B11,B115,B122,B20,B48,C65,C80,D4
lof_cds	Chr1	75816502	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	8	B11,B115,B122,B20,B48,C65,C80,D4
typical_cds_rare	Chr1	75816718	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	4	B59,B60,B71,C62
typical_cds_rare	Chr1	75816820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	1	C7
typical_cds_rare	Chr1	75816978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	5	B59,B60,B71,C62,D10
lof_cds	Chr1	75817110	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	152	A10,A14,A15,A16,A18,A19,A22,A23,A24,A25,A3,A4,A5,A6,A9,B10,B101,B104,B106,B110,B115,B117,B118,B119,B12,B120,B123,B124,B125,B126,B127,B129,B130,B131,B132,B133,B134,B135,B136,B137,B138,B14,B15,B16,B17,B18,B2,B20,B22,B23,B24,B26,B29,B3,B31,B32,B34,B4,B40,B41,B44,B45,B46,B48,B51,B55,B57,B58,B59,B60,B62,B63,B64,B65,B66,B69,B71,B72,B73,B75,B76,B78,B8,B80,B81,B82,B84,B85,B86,B87,B88,B90,B93,B94,B95,B97,B98,B99,C10,C12,C14,C15,C16,C17,C18,C19,C20,C21,C23,C24,C25,C27,C3,C33,C34,C35,C37,C39,C41,C42,C43,C45,C46,C49,C50,C51,C54,C55,C56,C58,C6,C60,C62,C72,C73,C74,C75,C76,C77,C78,C83,C84,C85,C86,C87,C9,D10,D2,D3,D4,D5,D9
lof_cds	Chr1	75817113	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	32	A10,A18,A19,A23,A4,B10,B101,B118,B133,B16,B2,B23,B26,B59,B60,B69,B80,B85,B87,B94,C20,C35,C49,C54,C60,C74,C75,C83,C85,D10,D4,D5
typical_cds_rare	Chr1	75817259	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	2	A11,C71
lof_cds	Chr1	75817268	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131006280	SmilChr01G006024	131006280	rna-XM_057933472.1	106	A14,A15,A16,A22,A24,A25,A3,A5,A6,B104,B106,B110,B115,B117,B119,B12,B120,B123,B124,B127,B129,B130,B131,B132,B134,B135,B136,B137,B138,B14,B15,B17,B18,B20,B22,B3,B31,B32,B34,B4,B40,B41,B44,B45,B46,B48,B51,B55,B57,B58,B62,B63,B64,B65,B66,B71,B72,B73,B75,B76,B78,B8,B81,B82,B86,B88,B90,B93,B95,B97,B98,B99,C12,C14,C16,C17,C18,C19,C21,C23,C24,C25,C3,C33,C34,C37,C39,C42,C43,C45,C46,C50,C51,C53,C55,C56,C58,C72,C73,C76,C77,C86,C87,C9,D3,D9