source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr1	75891268	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	A16,B113,C48
lof_cds	Chr1	75891364	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B7,D11
typical_cds_rare	Chr1	75891364	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B7,D11
typical_cds_rare	Chr1	75891406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	4	A15,B37,C17,D6
typical_cds_rare	Chr1	75891412	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	4	B104,B139,C9,D11
typical_cds_rare	Chr1	75891418	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C37
typical_cds_rare	Chr1	75891445	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B126,B96
typical_cds_rare	Chr1	75891448	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B126
typical_cds_rare	Chr1	75891453	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B81
typical_cds_rare	Chr1	75891566	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C62
lof_cds	Chr1	75891625	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	31	B103,B105,B118,B119,B121,B124,B135,B139,B2,B22,B3,B34,B4,B50,B54,B62,B76,B83,B9,B94,B95,C30,C45,C50,C6,C63,C65,C8,C86,D11,D3
lof_cds	Chr1	75891631	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	31	B103,B105,B118,B119,B121,B124,B135,B139,B2,B22,B3,B34,B4,B50,B54,B62,B76,B83,B9,B94,B95,C30,C45,C50,C6,C63,C65,C8,C86,D11,D3
lof_cds	Chr1	75891635	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	31	B103,B105,B118,B119,B121,B124,B135,B139,B2,B22,B3,B34,B4,B50,B54,B62,B76,B83,B9,B94,B95,C30,C45,C50,C6,C63,C65,C8,C86,D11,D3
lof_cds	Chr1	75891637	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	31	B103,B105,B118,B119,B121,B124,B135,B139,B2,B22,B3,B34,B4,B50,B54,B62,B76,B83,B9,B94,B95,C30,C45,C50,C6,C63,C65,C8,C86,D11,D3
typical_cds_rare	Chr1	75891680	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B122
lof_cds	Chr1	75891698	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B71
typical_cds_rare	Chr1	75891698	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B71
lof_cds	Chr1	75891706	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B71,C18
typical_cds_rare	Chr1	75891706	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B71,C18
lof_cds	Chr1	75891712	A	AAT	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B71,C18
typical_cds_rare	Chr1	75891712	A	AAT	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B126,B71,C18
typical_cds_rare	Chr1	75891722	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B126,B71
lof_cds	Chr1	75891850	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B122
typical_cds_rare	Chr1	75891850	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B122
typical_cds_rare	Chr1	75891861	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B136,C1,C38
typical_cds_rare	Chr1	75891865	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C16,C34
typical_cds_rare	Chr1	75891898	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B44,B63,C19,C50,C7
typical_cds_rare	Chr1	75891928	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B140,B68
typical_cds_rare	Chr1	75891975	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B49
typical_cds_rare	Chr1	75891984	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B17
typical_cds_rare	Chr1	75891985	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B17
typical_cds_rare	Chr1	75891996	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B17,C19
typical_cds_rare	Chr1	75892070	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B1,C16
lof_cds	Chr1	75892074	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C16
typical_cds_rare	Chr1	75892074	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C16
lof_cds	Chr1	75892077	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C16
typical_cds_rare	Chr1	75892077	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C16
typical_cds_rare	Chr1	75892083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B1
typical_cds_rare	Chr1	75892087	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C19,C43
typical_cds_rare	Chr1	75892101	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B16,B55,B87,C16,C77
lof_cds	Chr1	75892156	CCT	C	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B76
typical_cds_rare	Chr1	75892156	CCT	C	INDEL	2bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B76
lof_cds	Chr1	75892159	T	TCC	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B76
typical_cds_rare	Chr1	75892159	T	TCC	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B76
lof_cds	Chr1	75892223	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	35	A2,B101,B102,B103,B105,B106,B119,B131,B136,B26,B27,B29,B33,B48,B56,B64,B66,B68,B72,B92,B94,B96,C1,C20,C25,C29,C31,C38,C43,C44,C51,C64,C81,C86,D1
typical_cds_rare	Chr1	75892236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	A21
lof_cds	Chr1	75892256	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	C13,C84,D9
typical_cds_rare	Chr1	75892256	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	C13,C84,D9
typical_cds_rare	Chr1	75892346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C50
lof_cds	Chr1	75892445	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	26	A1,B103,B129,B136,B16,B27,B32,B38,B39,B40,B42,B48,B51,B55,B7,B85,C16,C19,C27,C34,C43,C55,C62,C76,C77,D10
typical_cds_rare	Chr1	75892482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B51,C16
typical_cds_rare	Chr1	75892501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B119
typical_cds_rare	Chr1	75892510	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B119
typical_cds_rare	Chr1	75892550	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B119
typical_cds_rare	Chr1	75892560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B139,B2,B47
typical_cds_rare	Chr1	75892582	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B2,B47
typical_cds_rare	Chr1	75892586	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B2,B47,D2
typical_cds_rare	Chr1	75892618	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B18,B81,C72,D2,D4
typical_cds_rare	Chr1	75892722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B127,B14,B51,C57,C69
typical_cds_rare	Chr1	75892772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B122,B17,B80,C16,C5
typical_cds_rare	Chr1	75892775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B122,B17,B80,C16,C5
lof_cds	Chr1	75892779	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	109	A11,A14,A18,A2,A20,A22,A25,A3,A4,A8,B101,B105,B109,B11,B111,B112,B113,B114,B119,B121,B122,B127,B13,B131,B137,B15,B18,B19,B21,B22,B23,B24,B25,B26,B29,B30,B31,B32,B34,B35,B39,B40,B42,B43,B5,B50,B52,B56,B57,B6,B61,B68,B69,B72,B78,B79,B8,B80,B83,B84,B85,B89,B91,B95,B96,B97,C12,C15,C17,C22,C24,C25,C26,C27,C29,C3,C30,C31,C32,C34,C36,C39,C46,C47,C48,C49,C5,C52,C55,C56,C58,C60,C62,C63,C65,C67,C68,C74,C76,C79,C8,C80,C81,C82,C83,D1,D3,D5,D7
lof_cds	Chr1	75892782	A	AGT	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	109	A11,A14,A18,A2,A20,A22,A25,A3,A4,A8,B101,B105,B109,B11,B111,B112,B113,B114,B119,B121,B122,B127,B13,B131,B137,B15,B18,B19,B21,B22,B23,B24,B25,B26,B29,B30,B31,B32,B34,B35,B39,B40,B42,B43,B5,B50,B52,B56,B57,B6,B61,B68,B69,B72,B78,B79,B8,B80,B83,B84,B85,B89,B91,B95,B96,B97,C12,C15,C17,C22,C24,C25,C26,C27,C29,C3,C30,C31,C32,C34,C36,C39,C46,C47,C48,C49,C5,C52,C55,C56,C58,C60,C62,C63,C65,C67,C68,C74,C76,C79,C8,C80,C81,C82,C83,D1,D3,D5,D7
typical_cds_rare	Chr1	75892798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B122,B17,B80,C16,C5
lof_cds	Chr1	75892821	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B37,B42,B49
typical_cds_rare	Chr1	75892821	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B37,B42,B49
lof_cds	Chr1	75892837	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C43,D10
typical_cds_rare	Chr1	75892837	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C43,D10
lof_cds	Chr1	75892847	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C43,D10
typical_cds_rare	Chr1	75892847	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	C43,D10
typical_cds_rare	Chr1	75892869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B37,B4,B42,B49,B67
typical_cds_rare	Chr1	75892885	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	A7,C17
lof_cds	Chr1	75892906	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C33
typical_cds_rare	Chr1	75892906	C	CGA	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C33
lof_cds	Chr1	75892907	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B111,B35,B82
typical_cds_rare	Chr1	75892907	G	GGT	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B111,B35,B82
lof_cds	Chr1	75892909	GGA	G	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C33
typical_cds_rare	Chr1	75892909	GGA	G	INDEL	2bp_deletion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C33
typical_cds_rare	Chr1	75892960	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	A8,B111,B35,B82,C56
typical_cds_rare	Chr1	75892963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B4,B67
lof_cds	Chr1	75892980	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	6	B17,B80,C16,C5,D10,D11
lof_cds	Chr1	75892987	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	7	B122,B17,B80,C16,C5,D10,D11
lof_cds	Chr1	75892992	AAC	A	INDEL	2bp_deletion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	7	B122,B17,B80,C16,C5,D10,D11
typical_cds_rare	Chr1	75893098	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	C87
typical_cds_rare	Chr1	75893315	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B59
typical_cds_rare	Chr1	75893317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	B59
typical_cds_rare	Chr1	75893362	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	5	B102,B53,B7,B87,C64
typical_cds_rare	Chr1	75893383	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B139,B7,C81
typical_cds_rare	Chr1	75893386	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B139,B7,C81
typical_cds_rare	Chr1	75893394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B139,B7
typical_cds_rare	Chr1	75893400	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B139,B7,B80
typical_cds_rare	Chr1	75893402	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B139,B7,B80
typical_cds_rare	Chr1	75893443	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	4	A9,B27,B92,B95
typical_cds_rare	Chr1	75893473	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	A21,B38,B39
typical_cds_rare	Chr1	75893479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B7,C33
typical_cds_rare	Chr1	75893498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B44,B59,C20
typical_cds_rare	Chr1	75893517	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	A21
typical_cds_rare	Chr1	75893572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	1	A21
typical_cds_rare	Chr1	75893597	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B135,B28,C18
typical_cds_rare	Chr1	75893641	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	4	B140,B51,B56,C69
typical_cds_rare	Chr1	75893775	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	2	B38,B39
lof_cds	Chr1	75893837	C	CCT	INDEL	2bp_insertion	frameshift_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B44,C19,D6
typical_cds_rare	Chr1	75893837	C	CCT	INDEL	2bp_insertion	CDS_variant	LOC131013707	SmilChr01G006040	131013707	rna-XM_057941823.1	3	B44,C19,D6