source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	2622783	G	GGA	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	A3,B46
typical_cds_rare	Chr2	2622783	G	GGA	INDEL	2bp_insertion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	A3,B46
typical_cds_rare	Chr2	2622825	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	4	A3,B46,C17,C79
lof_cds	Chr2	2622834	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	A2,B102,C86
typical_cds_rare	Chr2	2622834	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	A2,B102,C86
lof_cds	Chr2	2622835	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	B18,B19,B75
typical_cds_rare	Chr2	2622835	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	B18,B19,B75
typical_cds_rare	Chr2	2622869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	D10
typical_cds_rare	Chr2	2622950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	C33,C6
typical_cds_rare	Chr2	2622963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	C72
lof_cds	Chr2	2622987	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	145	A1,A11,A13,A15,A16,A20,A22,A23,A3,A4,A5,A6,A7,A9,B1,B10,B103,B104,B105,B108,B109,B111,B112,B115,B118,B119,B12,B123,B125,B126,B128,B129,B13,B130,B135,B136,B138,B139,B14,B140,B16,B17,B21,B24,B28,B3,B32,B33,B34,B35,B36,B37,B38,B39,B4,B42,B43,B44,B45,B46,B48,B5,B51,B54,B56,B57,B6,B61,B64,B65,B68,B72,B76,B78,B80,B81,B83,B86,B89,B90,B91,B92,B93,B94,B96,B97,B98,B99,C1,C10,C11,C13,C14,C17,C2,C21,C22,C23,C26,C28,C29,C3,C30,C31,C33,C38,C4,C40,C41,C44,C45,C48,C50,C52,C53,C54,C55,C56,C57,C58,C6,C60,C64,C65,C66,C67,C68,C69,C71,C73,C74,C75,C77,C79,C80,C81,C83,C85,C86,C87,D10,D2,D4,D6,D7
typical_cds_rare	Chr2	2623005	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	A4
typical_cds_rare	Chr2	2623033	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	C33,C80
typical_cds_rare	Chr2	2623077	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	A20,B67,B69
typical_cds_rare	Chr2	2623138	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	B27,B9
typical_cds_rare	Chr2	2623233	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	4	B65,C64,C66,C74
lof_cds	Chr2	2623246	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	143	A1,A11,A13,A15,A16,A20,A22,A23,A3,A4,A5,A6,A7,A9,B1,B10,B103,B104,B105,B108,B109,B111,B112,B115,B118,B119,B12,B123,B125,B126,B128,B129,B13,B130,B135,B136,B138,B139,B14,B140,B16,B17,B21,B28,B3,B32,B33,B34,B35,B36,B37,B38,B39,B4,B42,B43,B44,B45,B46,B48,B51,B54,B56,B57,B6,B61,B64,B65,B68,B72,B76,B78,B80,B83,B86,B89,B90,B91,B92,B93,B94,B96,B97,B98,B99,C1,C10,C11,C13,C14,C17,C2,C21,C22,C23,C26,C28,C29,C3,C30,C31,C32,C33,C38,C4,C40,C41,C44,C45,C48,C50,C52,C53,C54,C55,C56,C57,C58,C6,C60,C64,C65,C66,C67,C68,C69,C71,C73,C74,C75,C77,C80,C81,C83,C84,C85,C86,C87,D10,D2,D4,D6,D7
typical_cds_rare	Chr2	2623260	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	B14,C4
typical_cds_rare	Chr2	2623270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	B27,B9,D11
typical_cds_rare	Chr2	2623294	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	C33,C80
lof_cds	Chr2	2623367	G	GTA	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	98	A11,A13,A15,A20,A22,A23,A4,A6,A7,A9,B1,B103,B105,B108,B109,B112,B115,B118,B119,B12,B123,B125,B126,B128,B13,B136,B138,B139,B140,B16,B17,B28,B3,B33,B34,B35,B36,B37,B38,B39,B4,B42,B43,B48,B54,B56,B57,B64,B68,B76,B78,B80,B86,B89,B90,B92,B94,B96,B99,C1,C10,C11,C13,C2,C21,C22,C23,C26,C28,C3,C30,C31,C38,C40,C41,C44,C45,C48,C50,C53,C56,C57,C58,C6,C60,C65,C67,C69,C73,C75,C77,C80,C81,C85,D10,D4,D6,D7
lof_cds	Chr2	2623377	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	88	A11,A15,A20,A22,A23,A4,A6,A7,A9,B1,B103,B105,B108,B109,B112,B115,B118,B119,B12,B123,B125,B126,B128,B13,B139,B140,B16,B17,B28,B3,B33,B34,B35,B36,B37,B38,B39,B4,B42,B43,B48,B54,B56,B57,B64,B68,B76,B78,B80,B86,B94,B96,B99,C1,C10,C11,C13,C2,C21,C23,C26,C28,C3,C30,C31,C38,C40,C41,C44,C45,C50,C53,C56,C57,C58,C6,C60,C65,C67,C73,C75,C77,C80,C85,D10,D4,D6,D7
typical_cds_rare	Chr2	2623415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	D10
lof_cds	Chr2	2623495	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	127	A1,A11,A13,A15,A16,A20,A22,A23,A3,A5,A6,A7,A9,B1,B10,B104,B105,B108,B109,B111,B112,B118,B119,B12,B123,B125,B126,B128,B129,B13,B130,B136,B138,B139,B14,B140,B16,B21,B28,B3,B32,B33,B34,B35,B38,B39,B4,B42,B43,B44,B45,B46,B48,B5,B51,B54,B56,B57,B6,B64,B65,B68,B72,B76,B78,B80,B83,B89,B90,B92,B94,B96,B97,B98,B99,C10,C11,C13,C14,C17,C2,C21,C22,C23,C26,C28,C29,C3,C32,C33,C38,C4,C40,C41,C44,C48,C52,C53,C54,C55,C56,C57,C58,C6,C60,C64,C65,C66,C67,C69,C71,C73,C74,C75,C77,C79,C80,C81,C83,C84,C85,C87,D10,D2,D4,D6,D7
lof_cds	Chr2	2623576	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	139	A1,A11,A13,A15,A16,A20,A22,A23,A3,A4,A5,A6,A7,A9,B1,B10,B103,B104,B105,B108,B109,B111,B112,B115,B118,B119,B12,B123,B125,B126,B128,B129,B13,B130,B135,B136,B138,B139,B14,B140,B16,B17,B21,B28,B3,B32,B33,B34,B35,B36,B38,B39,B4,B42,B43,B44,B45,B46,B48,B5,B51,B54,B56,B57,B6,B61,B64,B65,B68,B72,B76,B78,B80,B83,B86,B89,B90,B92,B94,B96,B97,B98,B99,C1,C10,C11,C13,C14,C17,C2,C21,C22,C23,C26,C28,C29,C3,C32,C33,C38,C4,C40,C41,C44,C45,C48,C50,C52,C53,C54,C55,C56,C57,C58,C6,C60,C64,C65,C66,C67,C68,C69,C71,C73,C74,C75,C77,C79,C80,C81,C83,C84,C85,C87,D10,D2,D4,D6,D7
typical_cds_rare	Chr2	2623608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	C22,C6
lof_cds	Chr2	2623708	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	54	A1,A15,A16,A23,A4,A9,B1,B128,B129,B136,B138,B28,B32,B33,B34,B38,B4,B42,B43,B44,B46,B48,B51,B61,B68,B72,B76,B80,B89,B96,B99,C11,C14,C22,C28,C29,C3,C31,C4,C48,C52,C53,C54,C55,C56,C66,C67,C73,C75,C81,C83,C87,D4,D6
lof_cds	Chr2	2623718	A	AT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	4	A1,B32,C54,C56
typical_cds_rare	Chr2	2623718	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	4	A1,B32,C54,C56
lof_cds	Chr2	2623727	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	B128,C67,C83
typical_cds_rare	Chr2	2623727	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	B128,C67,C83
lof_cds	Chr2	2623728	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	A15,D4
typical_cds_rare	Chr2	2623728	G	GAA	INDEL	2bp_insertion	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	A15,D4
typical_cds_rare	Chr2	2623944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	C14
typical_cds_rare	Chr2	2624112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	2	B129,B57
typical_cds_rare	Chr2	2624156	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	B24
typical_cds_rare	Chr2	2624202	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	1	D10
typical_cds_rare	Chr2	2624205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012589	SmilChr02G000203	131012589	rna-XM_057940572.1	3	A20,B67,B69