source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	3049426	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B25,B60,B76,B99,C16
typical_cds_rare	Chr2	3049444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	C12,C41
typical_cds_rare	Chr2	3049454	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	B1,B30,B33,C53
typical_cds_rare	Chr2	3049465	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C53
typical_cds_rare	Chr2	3049482	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C53
typical_cds_rare	Chr2	3049498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B71,D10
lof_cds	Chr2	3049510	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C26,C41,D4
typical_cds_rare	Chr2	3049510	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C26,C41,D4
typical_cds_rare	Chr2	3049530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B17,B41,B82,C61,D1
typical_cds_rare	Chr2	3049549	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	D4
typical_cds_rare	Chr2	3049550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	C26,C41
lof_cds	Chr2	3049559	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	D4
typical_cds_rare	Chr2	3049559	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	D4
lof_cds	Chr2	3049562	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C11,C36,C45
typical_cds_rare	Chr2	3049562	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C11,C36,C45
lof_cds	Chr2	3049569	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C11,C36,C45
typical_cds_rare	Chr2	3049569	CG	C	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	C11,C36,C45
typical_cds_rare	Chr2	3049594	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C44
lof_cds	Chr2	3049604	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	A1,B26,C16,C78
typical_cds_rare	Chr2	3049604	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	A1,B26,C16,C78
lof_cds	Chr2	3049649	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	33	A1,A10,A8,B101,B103,B131,B21,B26,B33,B42,B47,B77,B83,B84,B88,C11,C16,C22,C23,C25,C26,C27,C32,C37,C39,C56,C67,C68,C78,C79,C80,D3,D9
lof_cds	Chr2	3049652	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	30	A1,A10,A8,B101,B103,B21,B26,B33,B47,B77,B83,B84,B88,C11,C16,C22,C23,C25,C27,C32,C37,C39,C56,C67,C68,C78,C79,C80,D3,D9
typical_cds_rare	Chr2	3049657	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B131,C26
typical_cds_rare	Chr2	3049680	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B137,B42
typical_cds_rare	Chr2	3049682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	D3
typical_cds_rare	Chr2	3049738	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	B131,B137,C12,C26
lof_cds	Chr2	3049759	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	40	A1,A10,A22,A8,B101,B103,B114,B17,B21,B3,B30,B33,B34,B41,B47,B53,B58,B77,B83,B84,B88,C11,C16,C2,C22,C23,C25,C26,C27,C30,C32,C37,C51,C53,C56,C67,C68,C78,C79,C80
typical_cds_rare	Chr2	3049772	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C60
lof_cds	Chr2	3049785	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B39,D2
typical_cds_rare	Chr2	3049785	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B39,D2
lof_cds	Chr2	3049789	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B39,D2
typical_cds_rare	Chr2	3049789	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B39,D2
lof_cds	Chr2	3049794	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B131,C12,C26
typical_cds_rare	Chr2	3049794	AAG	A	INDEL	2bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B131,C12,C26
lof_cds	Chr2	3049798	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B131,C12,C26
typical_cds_rare	Chr2	3049798	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B131,C12,C26
lof_cds	Chr2	3049801	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	A24,B50,D3
typical_cds_rare	Chr2	3049801	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	A24,B50,D3
lof_cds	Chr2	3049803	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	51	A1,A10,A15,A2,A22,B101,B106,B114,B140,B3,B30,B33,B37,B41,B47,B53,B55,B61,B62,B71,B75,B8,B83,B88,B90,B96,B97,B99,C13,C16,C2,C22,C26,C27,C31,C34,C36,C44,C45,C49,C51,C53,C54,C57,C58,C62,C66,C67,C69,C78,D10
typical_cds_rare	Chr2	3049807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	A24,B50,D3
lof_cds	Chr2	3049809	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	31	A15,A2,B106,B37,B55,B61,B62,B71,B75,B88,B90,B96,B97,B99,C13,C2,C28,C31,C34,C36,C44,C45,C49,C51,C54,C57,C58,C62,C66,C69,D10
lof_cds	Chr2	3049826	GTA	G	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C12
typical_cds_rare	Chr2	3049826	GTA	G	INDEL	2bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C12
lof_cds	Chr2	3049838	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	32	A16,A18,B123,B128,B130,B135,B15,B16,B31,B36,B44,B49,B56,B58,B64,B69,B73,B74,B88,B95,B96,C18,C38,C4,C41,C42,C43,C60,C72,C80,C84,C87
lof_cds	Chr2	3049840	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C87
typical_cds_rare	Chr2	3049840	T	TG	INDEL	1bp_insertion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C87
typical_cds_rare	Chr2	3049843	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B131,C12,C26
lof_cds	Chr2	3049849	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B37,B74,B99,C54,C66
typical_cds_rare	Chr2	3049849	AGG	A	INDEL	2bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B37,B74,B99,C54,C66
lof_cds	Chr2	3049871	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B139,B38,B39,B50,B64
typical_cds_rare	Chr2	3049871	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B139,B38,B39,B50,B64
typical_cds_rare	Chr2	3049919	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	D4
lof_cds	Chr2	3049934	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	6	B18,B80,B85,C18,C2,C24
typical_cds_rare	Chr2	3049936	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B83,C19,C77
typical_cds_rare	Chr2	3049960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B83,C19,C77
typical_cds_rare	Chr2	3049986	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C44
typical_cds_rare	Chr2	3050011	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	B131
typical_cds_rare	Chr2	3050032	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	A14,A24,B28,B50,D3
typical_cds_rare	Chr2	3050067	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	B1,B17,B61,C70
typical_cds_rare	Chr2	3050089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B19,B27,C37
typical_cds_rare	Chr2	3050135	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	B125,C34
typical_cds_rare	Chr2	3050204	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	B104
typical_cds_rare	Chr2	3050218	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	A2,B42
typical_cds_rare	Chr2	3050221	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	4	B101,B47,C22,C25
typical_cds_rare	Chr2	3050297	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	2	A11,B101
lof_cds	Chr2	3050324	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B80,B98,C50
typical_cds_rare	Chr2	3050324	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B80,B98,C50
typical_cds_rare	Chr2	3050336	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	3	B80,B98,C50
typical_cds_rare	Chr2	3050429	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	1	C2
typical_cds_rare	Chr2	3050431	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	B131,B9,C12,C26,C41
typical_cds_rare	Chr2	3050444	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007838	SmilChr02G000238	131007838	rna-XM_057934753.1	5	A14,A24,B28,B46,D3