source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	4004979	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	25	A3,A4,A5,B115,B121,B46,B54,B69,B7,B75,C16,C27,C3,C37,C39,C43,C46,C63,C7,C71,C72,C8,C86,D5,D6
typical_cds_rare	Chr2	4004995	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	B21
lof_cds	Chr2	4004997	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	29	A25,B10,B101,B106,B11,B125,B133,B135,B137,B15,B2,B25,B26,B29,B47,B65,B67,B85,B87,B99,C14,C18,C34,C48,C59,C65,C77,C79,C8
lof_cds	Chr2	4005014	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	73	A1,A10,A11,A2,A23,A24,A3,A5,B109,B112,B12,B120,B121,B124,B125,B128,B133,B14,B140,B19,B20,B21,B22,B24,B27,B30,B31,B34,B46,B5,B60,B66,B70,B74,B78,B89,B9,B90,B92,B93,B94,B95,C1,C11,C15,C16,C17,C2,C21,C25,C28,C32,C37,C42,C44,C5,C50,C52,C58,C60,C62,C64,C66,C68,C69,C71,C73,C76,C78,C87,D11,D3,D4
typical_cds_rare	Chr2	4005031	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
lof_cds	Chr2	4005045	CAT	C	INDEL	2bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
typical_cds_rare	Chr2	4005045	CAT	C	INDEL	2bp_deletion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
lof_cds	Chr2	4005049	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
typical_cds_rare	Chr2	4005049	A	ACG	INDEL	2bp_insertion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
typical_cds_rare	Chr2	4005053	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	3	B121,C37,C71
typical_cds_rare	Chr2	4005091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	D10
typical_cds_rare	Chr2	4005112	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	4	B107,B40,C78,D10
typical_cds_rare	Chr2	4005145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	3	B107,B40,C78
lof_cds	Chr2	4005152	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	B35
typical_cds_rare	Chr2	4005152	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	B35
typical_cds_rare	Chr2	4005174	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	3	B130,B72,C55
typical_cds_rare	Chr2	4005184	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	2	A24,C42
lof_cds	Chr2	4005209	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	2	C37,C71
typical_cds_rare	Chr2	4005209	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	2	C37,C71
typical_cds_rare	Chr2	4005286	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	5	B13,B140,C20,C40,C44
typical_cds_rare	Chr2	4005292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	B102
lof_cds	Chr2	4005324	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	D10
typical_cds_rare	Chr2	4005324	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	D10
typical_cds_rare	Chr2	4005368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	1	B40
typical_cds_rare	Chr2	4005394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	3	B100,C37,C71
lof_cds	Chr2	4005420	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	2	B4,D7
typical_cds_rare	Chr2	4005420	TCA	T	INDEL	2bp_deletion	CDS_variant	LOC131012763	SmilChr02G000319	131012763	rna-XM_057940785.1	2	B4,D7