source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	5160367	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	6	B140,B58,B68,B96,C20,C82
typical_cds_rare	Chr2	5160375	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B96
lof_cds	Chr2	5160377	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	6	B28,B63,B91,C56,C59,C63
typical_cds_rare	Chr2	5160379	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	C17,C20
typical_cds_rare	Chr2	5160394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C13
typical_cds_rare	Chr2	5160395	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	C51,C62
lof_cds	Chr2	5160403	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	14	A22,B102,B35,B49,B54,B79,B99,C21,C22,C23,C33,C60,C86,D5
typical_cds_rare	Chr2	5160405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B123,B53,B83
typical_cds_rare	Chr2	5160409	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	A11
typical_cds_rare	Chr2	5160410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B9
typical_cds_rare	Chr2	5160411	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B114,B41
lof_cds	Chr2	5160416	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	10	B27,B53,B85,B9,C11,C28,C7,C9,D1,D3
lof_cds	Chr2	5160420	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B117
typical_cds_rare	Chr2	5160420	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B117
typical_cds_rare	Chr2	5160423	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C11
typical_cds_rare	Chr2	5160431	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B127,C82
typical_cds_rare	Chr2	5160438	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C82
lof_cds	Chr2	5160440	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	9	B27,B53,B85,B9,C11,C28,C7,C9,D1
lof_cds	Chr2	5160445	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	42	A11,A15,A8,B103,B105,B113,B114,B115,B119,B125,B127,B138,B140,B2,B56,B76,B81,B86,B9,B97,C1,C20,C21,C25,C3,C30,C31,C44,C45,C47,C52,C53,C60,C67,C69,C71,C75,C82,C87,D2,D8,D9
typical_cds_rare	Chr2	5160450	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C47
typical_cds_rare	Chr2	5160456	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B28,D3
typical_cds_rare	Chr2	5160458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	B103,B119,B56,B9,C3
lof_cds	Chr2	5160465	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
typical_cds_rare	Chr2	5160465	CA	C	INDEL	1bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
lof_cds	Chr2	5160466	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	6	B128,B133,B65,B86,C59,C79
lof_cds	Chr2	5160495	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
typical_cds_rare	Chr2	5160495	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
lof_cds	Chr2	5160496	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
typical_cds_rare	Chr2	5160496	GCC	G	INDEL	2bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A5,B117,B47
lof_cds	Chr2	5160507	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B76,B97
typical_cds_rare	Chr2	5160507	A	AC	INDEL	1bp_insertion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B76,B97
lof_cds	Chr2	5160509	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B138
typical_cds_rare	Chr2	5160509	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B138
typical_cds_rare	Chr2	5160528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	A15,B33,C51,C62,D1
lof_cds	Chr2	5160538	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	26	A16,B103,B111,B130,B138,B23,B28,B37,B67,B71,B78,B88,B97,C2,C20,C27,C3,C33,C40,C46,C48,C69,C70,C8,C80,D5
lof_cds	Chr2	5160541	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B128,C15,C21,C62
typical_cds_rare	Chr2	5160541	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B128,C15,C21,C62
lof_cds	Chr2	5160543	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	26	A16,B103,B111,B130,B131,B138,B23,B28,B37,B67,B71,B78,B88,B97,C2,C20,C27,C3,C33,C40,C46,C48,C70,C8,C80,D5
typical_cds_rare	Chr2	5160559	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B28,B31
typical_cds_rare	Chr2	5160562	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B131,C26,C44
lof_cds	Chr2	5160565	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B131,C26,C44
typical_cds_rare	Chr2	5160565	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B131,C26,C44
lof_cds	Chr2	5160566	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	28	A16,B103,B11,B111,B130,B133,B138,B23,B34,B37,B67,B71,B78,B88,B97,C2,C20,C27,C3,C33,C40,C46,C48,C50,C68,C70,C80,D5
typical_cds_rare	Chr2	5160571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B11,B133,C50,C68
typical_cds_rare	Chr2	5160578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B131
typical_cds_rare	Chr2	5160584	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	C27,C50,C68
lof_cds	Chr2	5160593	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B111,B23,C2
typical_cds_rare	Chr2	5160593	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B111,B23,C2
lof_cds	Chr2	5160595	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B131,B37,C20
typical_cds_rare	Chr2	5160595	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B131,B37,C20
typical_cds_rare	Chr2	5160600	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	B111,B23,B37,C2,C20
typical_cds_rare	Chr2	5160601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	B111,B23,B37,C2,C20
typical_cds_rare	Chr2	5160605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B131
lof_cds	Chr2	5160606	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	A15,B33
typical_cds_rare	Chr2	5160606	ACC	A	INDEL	2bp_deletion	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	A15,B33
typical_cds_rare	Chr2	5160608	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	B70,B86,C11,C18,C21
typical_cds_rare	Chr2	5160615	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	A15,B33
typical_cds_rare	Chr2	5160631	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B55
typical_cds_rare	Chr2	5160647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B55,B74
typical_cds_rare	Chr2	5160655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B55,B74
typical_cds_rare	Chr2	5160696	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B71,B90,C47,D8
typical_cds_rare	Chr2	5160750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C81
typical_cds_rare	Chr2	5160757	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B68
typical_cds_rare	Chr2	5160814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B115
typical_cds_rare	Chr2	5160869	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	5	B11,B138,B24,B30,B41
typical_cds_rare	Chr2	5160909	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B100
typical_cds_rare	Chr2	5160912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A3,C17,C79
typical_cds_rare	Chr2	5160929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B102,B23,B56
typical_cds_rare	Chr2	5160931	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B136,B55
typical_cds_rare	Chr2	5160947	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	A5,B104
typical_cds_rare	Chr2	5160950	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B1,C58
typical_cds_rare	Chr2	5160960	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	A16,B128,B66
typical_cds_rare	Chr2	5160963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	C28,C36
typical_cds_rare	Chr2	5160965	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B136,B55
typical_cds_rare	Chr2	5160972	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B35
typical_cds_rare	Chr2	5160979	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	A10,B81,B94,D11
typical_cds_rare	Chr2	5160987	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B1,B107,B15
typical_cds_rare	Chr2	5160988	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C7
typical_cds_rare	Chr2	5161004	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	2	B132,C32
lof_cds	Chr2	5161007	GCC	G	INDEL	2bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	47	A16,A21,A25,A5,A7,B119,B12,B123,B128,B136,B23,B3,B33,B40,B41,B45,B54,B55,B61,B65,B66,B70,B74,C1,C10,C11,C12,C27,C30,C35,C36,C46,C47,C49,C51,C54,C56,C6,C63,C65,C79,C81,C86,D10,D11,D2,D7
typical_cds_rare	Chr2	5161014	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B54,C29,C55
typical_cds_rare	Chr2	5161017	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B11,B99,C28,C58
lof_cds	Chr2	5161052	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	102	A1,A15,A18,A2,A24,A6,A7,B1,B10,B100,B104,B105,B110,B114,B118,B12,B120,B123,B131,B136,B139,B140,B15,B17,B2,B20,B23,B24,B28,B29,B3,B30,B34,B35,B36,B39,B40,B46,B47,B5,B50,B51,B52,B59,B6,B60,B61,B62,B63,B64,B68,B70,B72,B73,B76,B77,B85,B86,B89,B90,B91,B92,B94,B95,B96,B97,C10,C14,C2,C21,C23,C24,C25,C27,C28,C29,C30,C34,C44,C45,C46,C51,C53,C55,C56,C6,C62,C63,C65,C66,C71,C75,C78,C8,C81,C82,C85,C86,C9,D1,D3,D6
lof_cds	Chr2	5161054	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	69	A10,A14,A16,A18,A19,A2,A24,A5,A6,B10,B104,B110,B111,B120,B123,B131,B132,B136,B137,B139,B15,B19,B23,B24,B29,B3,B32,B39,B44,B47,B49,B5,B51,B52,B53,B55,B57,B59,B60,B61,B62,B68,B69,B73,B76,B79,B81,B89,B94,C1,C13,C16,C2,C25,C34,C35,C41,C46,C51,C55,C60,C63,C66,C71,C78,C82,D1,D2,D9
lof_cds	Chr2	5161059	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	26	A2,B100,B125,B2,B20,B35,B4,B72,B77,B90,B92,B95,B96,C2,C21,C24,C29,C32,C33,C34,C46,C6,C68,C79,C82,C9
lof_cds	Chr2	5161062	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	9	B140,B50,B85,B94,C10,C45,C53,C62,C85
typical_cds_rare	Chr2	5161075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	B62
typical_cds_rare	Chr2	5161086	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	1	C71
typical_cds_rare	Chr2	5161087	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	4	B37,B82,B90,C7
typical_cds_rare	Chr2	5161093	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007884	SmilChr02G000411	131007884	rna-XM_057934796.1	3	B62,B98,C18