source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	7177366	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	B117,C27,C33,C38
typical_cds_rare	Chr2	7177366	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	B117,C27,C33,C38
lof_cds	Chr2	7177385	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	7	A15,B121,B20,B33,B61,C56,C71
lof_cds	Chr2	7177396	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	9	B107,B126,B32,B57,B73,B78,B8,C16,C19
lof_cds	Chr2	7177401	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	3	B125,B84,B95
typical_cds_rare	Chr2	7177401	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	3	B125,B84,B95
typical_cds_rare	Chr2	7177403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	B104,B32,B48,B78,C56
typical_cds_rare	Chr2	7177416	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	B128,D5
typical_cds_rare	Chr2	7177461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	1	A16
typical_cds_rare	Chr2	7177462	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	B100,B94
lof_cds	Chr2	7177477	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	209	A1,A10,A11,A13,A14,A15,A16,A18,A19,A21,A22,A23,A24,A25,A3,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B135,B136,B138,B140,B16,B17,B18,B19,B2,B20,B21,B24,B25,B26,B27,B28,B29,B3,B31,B33,B34,B37,B38,B39,B40,B42,B43,B44,B45,B46,B47,B48,B5,B51,B53,B54,B55,B56,B57,B58,B59,B60,B61,B62,B63,B64,B65,B67,B68,B69,B7,B70,B71,B72,B74,B75,B77,B79,B80,B81,B83,B84,B85,B86,B87,B9,B90,B92,B93,B94,B95,B96,B97,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C36,C37,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C55,C56,C57,C58,C59,C6,C61,C62,C64,C65,C66,C68,C7,C70,C71,C72,C73,C74,C75,C76,C78,C8,C82,C83,C84,C85,C86,C87,C9,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr2	7177478	CGA	C	INDEL	2bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	208	A1,A10,A11,A13,A14,A15,A16,A18,A19,A21,A22,A23,A24,A25,A3,A5,A6,A8,A9,B1,B10,B100,B101,B102,B103,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B123,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B135,B136,B138,B140,B16,B17,B18,B19,B2,B20,B21,B24,B25,B26,B27,B28,B29,B3,B31,B33,B34,B37,B38,B39,B40,B42,B43,B44,B45,B46,B47,B48,B5,B51,B53,B54,B55,B56,B57,B58,B59,B60,B61,B62,B63,B64,B65,B67,B68,B69,B7,B70,B71,B72,B74,B75,B77,B79,B80,B81,B83,B84,B85,B86,B87,B9,B90,B92,B93,B94,B95,B96,B97,B99,C1,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C26,C27,C28,C29,C3,C30,C31,C32,C33,C34,C36,C37,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C51,C52,C55,C56,C57,C58,C59,C6,C61,C62,C64,C65,C66,C68,C7,C70,C71,C72,C73,C74,C75,C76,C78,C8,C82,C83,C84,C85,C86,C87,D1,D11,D2,D3,D4,D5,D6,D7,D8,D9
lof_cds	Chr2	7177513	C	CTG	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	B104,B136,B94,C15,C45
typical_cds_rare	Chr2	7177513	C	CTG	INDEL	2bp_insertion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	B104,B136,B94,C15,C45
lof_cds	Chr2	7177514	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	43	A13,A2,A20,A4,A7,B100,B105,B111,B113,B122,B127,B134,B139,B17,B18,B23,B24,B30,B32,B48,B49,B5,B50,B62,B73,B76,B78,B8,B88,B91,B97,B98,C12,C16,C29,C35,C4,C53,C76,C79,C9,D8,D9
lof_cds	Chr2	7177515	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	47	A13,A2,A20,A4,A7,B100,B104,B105,B111,B113,B122,B127,B134,B136,B139,B17,B18,B23,B24,B30,B32,B48,B49,B5,B50,B62,B73,B76,B78,B8,B88,B91,B94,B97,B98,C12,C15,C16,C35,C4,C45,C53,C76,C79,C9,D8,D9
typical_cds_rare	Chr2	7177522	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	3	B106,B54,C20
lof_cds	Chr2	7177528	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	A18,B106,B54,C20
typical_cds_rare	Chr2	7177528	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	A18,B106,B54,C20
typical_cds_rare	Chr2	7177570	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	B120,B137,C37,D3
lof_cds	Chr2	7177581	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	15	A1,B106,B113,B12,B135,B55,B63,B64,B71,B74,B83,C1,C4,C7,C86
lof_cds	Chr2	7177613	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	B106,B45,B54,C20
typical_cds_rare	Chr2	7177613	A	AG	INDEL	1bp_insertion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	4	B106,B45,B54,C20
typical_cds_rare	Chr2	7177661	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	C48,C49
lof_cds	Chr2	7177664	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	63	A1,A19,A24,A5,A6,A8,B101,B110,B114,B119,B12,B124,B132,B136,B140,B15,B19,B22,B26,B34,B39,B40,B45,B46,B50,B53,B55,B63,B64,B69,B7,B74,B77,B79,B8,B80,B81,B83,B9,B94,B97,C1,C14,C17,C18,C2,C26,C29,C4,C42,C43,C47,C60,C68,C7,C71,C74,C78,C80,D10,D2,D5,D6
lof_cds	Chr2	7177667	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	195	A10,A13,A14,A15,A18,A19,A2,A20,A22,A25,A3,A4,A6,A8,A9,B1,B10,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B121,B123,B124,B125,B126,B127,B128,B129,B13,B131,B132,B134,B135,B138,B139,B140,B16,B17,B18,B19,B2,B20,B21,B22,B24,B26,B27,B28,B30,B31,B32,B33,B34,B35,B36,B38,B39,B42,B43,B44,B47,B48,B5,B50,B52,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B65,B67,B69,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B81,B82,B84,B85,B87,B88,B9,B91,B92,B93,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C15,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C29,C3,C30,C32,C33,C34,C35,C36,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C55,C56,C58,C59,C6,C60,C61,C62,C64,C65,C66,C68,C7,C70,C71,C72,C73,C74,C75,C76,C77,C79,C8,C81,C82,C83,C84,C85,C86,C87,C9,D2,D6,D7,D8,D9
lof_cds	Chr2	7177670	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	217	A1,A10,A13,A14,A15,A18,A19,A2,A20,A22,A24,A25,A3,A4,A5,A6,A7,A8,A9,B1,B10,B101,B102,B103,B104,B105,B106,B107,B108,B109,B11,B110,B111,B112,B113,B114,B115,B117,B118,B119,B12,B121,B123,B124,B125,B126,B127,B128,B129,B13,B131,B132,B134,B135,B136,B138,B139,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B24,B26,B27,B28,B30,B31,B32,B33,B34,B35,B36,B38,B39,B40,B42,B43,B44,B45,B46,B47,B48,B5,B50,B52,B53,B54,B55,B56,B57,B58,B59,B6,B60,B61,B62,B63,B64,B65,B67,B69,B7,B70,B71,B72,B73,B74,B75,B76,B77,B78,B79,B8,B80,B81,B82,B83,B84,B85,B87,B88,B9,B91,B92,B93,B94,B95,B96,B97,B98,B99,C1,C10,C12,C13,C14,C15,C17,C18,C19,C2,C20,C21,C22,C23,C24,C25,C26,C29,C3,C30,C32,C33,C34,C35,C36,C38,C4,C40,C41,C42,C43,C44,C45,C46,C47,C48,C49,C5,C50,C51,C55,C56,C58,C59,C6,C60,C61,C62,C64,C65,C66,C68,C7,C70,C71,C72,C73,C74,C75,C76,C77,C78,C79,C8,C80,C81,C82,C83,C84,C85,C86,C87,C9,D10,D2,D5,D6,D7,D8,D9
typical_cds_rare	Chr2	7177671	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	B114,B38
typical_cds_rare	Chr2	7177693	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	C31,D11
typical_cds_rare	Chr2	7177755	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	1	C72
lof_cds	Chr2	7177793	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	B111,B17,B97,B98,D9
typical_cds_rare	Chr2	7177793	GTT	G	INDEL	2bp_deletion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	B111,B17,B97,B98,D9
lof_cds	Chr2	7177808	A	AGG	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	16	A10,A18,A4,B1,B107,B11,B125,B42,B43,B82,B87,C62,C74,C75,C79,C9
typical_cds_rare	Chr2	7177814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	1	B80
typical_cds_rare	Chr2	7177817	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	C8,D8
lof_cds	Chr2	7177823	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	B52,B85
typical_cds_rare	Chr2	7177823	T	TAC	INDEL	2bp_insertion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	2	B52,B85
lof_cds	Chr2	7177834	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	10	B126,B57,B78,B8,B88,C12,C16,C19,C35,C70
lof_cds	Chr2	7177837	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	10	B126,B57,B78,B8,B88,C12,C16,C19,C35,C70
typical_cds_rare	Chr2	7177874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	5	A16,A24,B18,C30,C42
typical_cds_rare	Chr2	7178411	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	3	B105,B40,C53
lof_cds	Chr2	7178444	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	1	B122
typical_cds_rare	Chr2	7178444	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131012877	SmilChr02G000522	131012877	rna-XM_057940866.1	1	B122