source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	7641879	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C8
typical_cds_rare	Chr2	7641879	CT	C	INDEL	1bp_deletion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C8
lof_cds	Chr2	7641882	TTC	T	INDEL	2bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C8
typical_cds_rare	Chr2	7641882	TTC	T	INDEL	2bp_deletion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C8
typical_cds_rare	Chr2	7641893	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C52
lof_cds	Chr2	7642215	G	GTA	INDEL	2bp_insertion	stop_gained,frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	D8
typical_cds_rare	Chr2	7642215	G	GTA	INDEL	2bp_insertion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	D8
typical_cds_rare	Chr2	7642239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	4	B59,B99,C47,C87
lof_cds	Chr2	7642252	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B12
typical_cds_rare	Chr2	7642252	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B12
typical_cds_rare	Chr2	7642287	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	D9
lof_cds	Chr2	7642298	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	B1,B15,C74
typical_cds_rare	Chr2	7642298	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	B1,B15,C74
lof_cds	Chr2	7642303	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	18	A10,A11,A2,B114,B12,B134,B15,B73,B84,B94,C14,C35,C46,C49,C55,C68,C83,D2
typical_cds_rare	Chr2	7642306	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B65,C72
typical_cds_rare	Chr2	7642317	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C15
typical_cds_rare	Chr2	7642321	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	C14,C55,C77
typical_cds_rare	Chr2	7642326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B65
lof_cds	Chr2	7642329	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	14	A23,B131,B133,B35,B43,B76,B86,C13,C18,C30,C33,C53,C81,C87
lof_cds	Chr2	7642351	GT	G	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B79
typical_cds_rare	Chr2	7642351	GT	G	INDEL	1bp_deletion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B79
lof_cds	Chr2	7642356	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	11	B102,B34,B41,B69,B93,C13,C37,C56,C65,C68,C76
typical_cds_rare	Chr2	7642365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B100,C47
lof_cds	Chr2	7642381	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	12	A23,B1,B35,B76,C13,C18,C28,C30,C53,C68,C81,C87
lof_cds	Chr2	7642391	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	13	B101,B108,B33,B34,B40,B46,B73,B81,B82,C17,C60,C78,D5
typical_cds_rare	Chr2	7642404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	C46,D2
typical_cds_rare	Chr2	7642406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	C46,D2
typical_cds_rare	Chr2	7642598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B86,C57
typical_cds_rare	Chr2	7642599	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B86,C57
typical_cds_rare	Chr2	7642640	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	D10
typical_cds_rare	Chr2	7642655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	C75,D7
lof_cds	Chr2	7642658	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	8	A1,B1,B13,B80,B86,C53,C57,C81
lof_cds	Chr2	7642661	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	8	A1,B1,B13,B80,B86,C53,C57,C81
lof_cds	Chr2	7642673	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	9	A1,A3,B1,B13,B80,B86,C53,C57,C81
typical_cds_rare	Chr2	7645574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B31,C28
typical_cds_rare	Chr2	7645584	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B107,D9
typical_cds_rare	Chr2	7645594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	4	B104,B121,B69,C4
typical_cds_rare	Chr2	7645597	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	5	B104,B121,C33,C4,D10
typical_cds_rare	Chr2	7645635	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B112,B51
typical_cds_rare	Chr2	7645663	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C48
lof_cds	Chr2	7645692	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	37	A1,A16,A19,A25,A5,A6,B106,B108,B110,B113,B125,B13,B135,B137,B29,B4,B42,B5,B52,B57,B79,B83,B95,C19,C29,C31,C47,C55,C58,C60,C68,C7,C70,C72,C79,D11,D4
typical_cds_rare	Chr2	7645723	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B120
typical_cds_rare	Chr2	7645745	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	B57,B88,C27
typical_cds_rare	Chr2	7645749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B107,D9
typical_cds_rare	Chr2	7645750	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	4	B131,B91,B98,C25
typical_cds_rare	Chr2	7645769	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C60
typical_cds_rare	Chr2	7645805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B123,B3
typical_cds_rare	Chr2	7645823	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C80
typical_cds_rare	Chr2	7645874	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	5	B107,B34,B52,C38,D9
lof_cds	Chr2	7645894	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	11	A16,B128,B130,B15,B27,B35,B85,C32,C68,C71,C84
typical_cds_rare	Chr2	7645933	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B121,B18
lof_cds	Chr2	7645945	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	B41,C36,C4
typical_cds_rare	Chr2	7645945	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	B41,C36,C4
typical_cds_rare	Chr2	7645978	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	3	A24,B131,C41
lof_cds	Chr2	7645988	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	10	A2,A3,B13,B135,B2,B33,B48,B66,C23,D2
typical_cds_rare	Chr2	7645996	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B57,C27
lof_cds	Chr2	7646018	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	76	A13,A15,A24,A3,A5,A6,A9,B1,B100,B102,B107,B11,B111,B117,B118,B132,B134,B135,B137,B139,B14,B16,B18,B19,B23,B27,B28,B30,B36,B42,B45,B46,B48,B5,B54,B55,B60,B61,B65,B67,B70,B73,B77,B78,B79,B82,B84,B87,B89,C18,C2,C34,C38,C40,C45,C49,C5,C50,C53,C55,C58,C60,C69,C7,C72,C75,C78,C79,C80,C81,C84,C85,D4,D5,D7,D8
lof_cds	Chr2	7646066	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	8	B108,B24,B26,B61,B8,B80,C35,C72
lof_cds	Chr2	7646077	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	9	B14,B15,B25,B88,C26,C37,C54,C77,C82
lof_cds	Chr2	7646078	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B98
typical_cds_rare	Chr2	7646078	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	B98
lof_cds	Chr2	7646090	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	24	A13,A18,A22,B102,B105,B11,B30,B47,B62,B68,B93,C22,C30,C46,C48,C56,C65,C66,C71,C73,C75,C86,D1,D6
typical_cds_rare	Chr2	7646104	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B131,B91
lof_cds	Chr2	7646203	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	11	A7,B103,B122,B8,B80,C11,C37,C56,C65,C69,C72
typical_cds_rare	Chr2	7646211	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	4	B15,C68,C71,D11
typical_cds_rare	Chr2	7646226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	4	A6,B29,C19,C31
lof_cds	Chr2	7646252	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	6	B14,C38,C41,C58,C69,D8
lof_cds	Chr2	7646258	T	TTG	INDEL	2bp_insertion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C4
typical_cds_rare	Chr2	7646258	T	TTG	INDEL	2bp_insertion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	1	C4
lof_cds	Chr2	7646260	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B14,C58
typical_cds_rare	Chr2	7646260	TA	T	INDEL	1bp_deletion	CDS_variant	LOC131007934	SmilChr02G000549	131007934	rna-XM_057934845.1	2	B14,C58