source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	7881122	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	93	A19,A20,A22,A3,A4,A7,A8,B1,B10,B106,B109,B11,B110,B111,B113,B118,B120,B125,B127,B128,B129,B130,B131,B132,B134,B136,B139,B14,B29,B31,B36,B38,B39,B41,B44,B47,B52,B58,B61,B63,B64,B65,B67,B7,B70,B72,B74,B8,B81,B86,B88,B89,B90,B92,B95,B97,C1,C11,C12,C14,C16,C17,C19,C21,C22,C23,C26,C28,C33,C34,C35,C36,C37,C39,C4,C46,C47,C50,C51,C59,C62,C69,C71,C73,C74,C75,C76,C77,C78,C86,C9,D6,D8
typical_cds_rare	Chr2	7881141	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B67
typical_cds_rare	Chr2	7881185	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	5	B49,B72,C30,C40,C87
lof_cds	Chr2	7881203	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B67
typical_cds_rare	Chr2	7881203	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B67
typical_cds_rare	Chr2	7881215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B49,B72,C40,C87
typical_cds_rare	Chr2	7881236	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B49,B72,C40,C87
lof_cds	Chr2	7881241	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B49,B72,C40,C87
typical_cds_rare	Chr2	7881241	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B49,B72,C40,C87
typical_cds_rare	Chr2	7881265	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	B49,B72,C40
typical_cds_rare	Chr2	7881280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
lof_cds	Chr2	7881297	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	165	A10,A13,A14,A15,A16,A18,A2,A21,A22,A23,A24,A3,A5,A7,A9,B10,B100,B101,B102,B103,B107,B112,B114,B115,B117,B119,B12,B120,B121,B122,B126,B127,B128,B13,B135,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B3,B30,B31,B32,B35,B36,B37,B4,B40,B41,B42,B43,B45,B46,B48,B49,B5,B52,B54,B56,B58,B59,B6,B60,B61,B65,B66,B68,B69,B7,B71,B73,B76,B77,B79,B8,B80,B81,B82,B83,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B97,B98,C1,C10,C13,C15,C19,C20,C22,C24,C27,C28,C29,C3,C30,C31,C32,C33,C37,C38,C41,C42,C43,C44,C45,C46,C48,C5,C51,C52,C53,C54,C55,C56,C57,C60,C61,C62,C64,C65,C66,C68,C70,C71,C73,C74,C79,C8,C80,C81,C82,C84,C85,D1,D10,D11,D2,D3,D4,D5,D7,D9
lof_cds	Chr2	7881300	G	GCC	INDEL	2bp_insertion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	166	A10,A13,A14,A15,A16,A18,A2,A21,A22,A23,A24,A3,A5,A7,A9,B10,B100,B101,B102,B103,B105,B107,B112,B114,B115,B117,B119,B12,B120,B121,B122,B126,B127,B128,B13,B135,B137,B138,B14,B140,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B3,B30,B31,B32,B35,B36,B37,B4,B40,B41,B42,B43,B45,B46,B48,B49,B5,B52,B54,B56,B58,B59,B6,B60,B61,B65,B66,B68,B69,B7,B71,B73,B76,B77,B79,B8,B80,B81,B82,B83,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B97,B98,C1,C10,C13,C15,C19,C20,C22,C24,C27,C28,C29,C3,C30,C31,C32,C33,C37,C38,C41,C42,C43,C44,C45,C46,C48,C5,C51,C52,C53,C54,C55,C56,C57,C60,C61,C62,C64,C65,C66,C68,C70,C71,C73,C74,C79,C8,C80,C81,C82,C84,C85,D1,D10,D11,D2,D3,D4,D5,D7,D9
lof_cds	Chr2	7881332	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	14	B15,B17,B21,B30,B35,B36,B45,B8,C33,C43,C55,C60,C71,D11
lof_cds	Chr2	7881333	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	151	A10,A13,A14,A15,A16,A18,A21,A22,A23,A24,A3,A5,A7,A9,B10,B100,B101,B102,B103,B104,B107,B112,B114,B115,B117,B119,B12,B120,B121,B122,B126,B127,B128,B13,B135,B138,B14,B140,B16,B18,B19,B2,B20,B22,B23,B24,B26,B27,B3,B30,B31,B32,B4,B40,B41,B42,B43,B45,B46,B48,B5,B54,B56,B58,B59,B6,B60,B61,B65,B66,B68,B69,B71,B73,B76,B77,B79,B80,B81,B82,B83,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B97,B98,C1,C10,C13,C15,C19,C20,C22,C24,C27,C28,C29,C3,C30,C31,C32,C37,C38,C41,C42,C43,C44,C45,C46,C48,C5,C51,C52,C53,C54,C56,C57,C61,C62,C63,C64,C65,C66,C68,C70,C73,C74,C75,C79,C8,C80,C81,C82,C84,C85,C9,D1,D10,D2,D3,D4,D5,D7,D9
lof_cds	Chr2	7881335	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	152	A10,A13,A14,A15,A16,A18,A21,A22,A23,A24,A3,A5,A7,A9,B10,B100,B101,B102,B103,B104,B107,B112,B114,B115,B117,B119,B12,B120,B121,B122,B126,B127,B13,B135,B138,B14,B140,B16,B18,B19,B2,B20,B21,B22,B23,B24,B26,B27,B3,B30,B31,B32,B4,B40,B41,B42,B43,B45,B46,B48,B5,B54,B56,B58,B59,B6,B60,B61,B65,B66,B68,B69,B71,B73,B76,B77,B79,B80,B81,B82,B83,B85,B86,B88,B89,B9,B91,B93,B94,B95,B96,B97,B98,C1,C10,C13,C15,C19,C20,C22,C24,C27,C28,C29,C3,C30,C31,C32,C37,C38,C41,C42,C43,C44,C45,C46,C48,C5,C51,C52,C53,C54,C56,C57,C61,C62,C63,C64,C65,C66,C68,C70,C73,C74,C75,C79,C8,C80,C81,C82,C84,C85,C9,D1,D10,D11,D2,D3,D4,D5,D7,D9
lof_cds	Chr2	7881339	T	TAC	INDEL	2bp_insertion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	139	A13,A14,A15,A16,A18,A21,A22,A23,A24,A5,A9,B10,B100,B101,B102,B103,B104,B107,B112,B114,B115,B117,B119,B12,B120,B121,B122,B126,B127,B13,B135,B138,B14,B15,B16,B17,B18,B19,B2,B20,B21,B22,B23,B24,B26,B27,B3,B30,B32,B4,B40,B41,B42,B43,B45,B46,B48,B5,B54,B56,B59,B6,B60,B61,B66,B68,B69,B71,B73,B76,B77,B79,B8,B80,B81,B82,B83,B85,B86,B89,B9,B91,B93,B94,B96,B98,C1,C10,C13,C15,C20,C24,C27,C28,C29,C30,C31,C32,C38,C42,C43,C44,C45,C46,C51,C52,C53,C54,C55,C56,C57,C60,C61,C62,C63,C64,C65,C66,C68,C70,C71,C73,C74,C79,C8,C80,C81,C84,C85,C9,D1,D10,D11,D2,D3,D4,D5,D7,D9
typical_cds_rare	Chr2	7881358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B120,B21,C37,D3
typical_cds_rare	Chr2	7881362	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	B95,C1,C74
typical_cds_rare	Chr2	7881366	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	B137,B35,B67
typical_cds_rare	Chr2	7881370	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B15,B35,C60,D11
typical_cds_rare	Chr2	7881384	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	B124,B137
typical_cds_rare	Chr2	7881467	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
lof_cds	Chr2	7881474	ACG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
typical_cds_rare	Chr2	7881474	ACG	A	INDEL	2bp_deletion	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
typical_cds_rare	Chr2	7881484	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	C31
typical_cds_rare	Chr2	7881501	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B67
typical_cds_rare	Chr2	7881508	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	C2
lof_cds	Chr2	7881526	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	5	A6,B105,B32,B40,C53
typical_cds_rare	Chr2	7881526	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	5	A6,B105,B32,B40,C53
typical_cds_rare	Chr2	7881531	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B137
typical_cds_rare	Chr2	7881556	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B35
typical_cds_rare	Chr2	7881578	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	B104,B137,B94,D11
typical_cds_rare	Chr2	7881581	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B137
typical_cds_rare	Chr2	7881595	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B111
typical_cds_rare	Chr2	7881616	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	5	B106,B139,C37,C40,C71
typical_cds_rare	Chr2	7881617	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	B137,B35,B67
typical_cds_rare	Chr2	7881621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	B35,B67
typical_cds_rare	Chr2	7881648	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	C2
typical_cds_rare	Chr2	7881742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
typical_cds_rare	Chr2	7881900	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	B15,D11
typical_cds_rare	Chr2	7881901	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	B135
typical_cds_rare	Chr2	7881912	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	A2
typical_cds_rare	Chr2	7881935	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	C2
lof_cds	Chr2	7882044	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	B35,B67
typical_cds_rare	Chr2	7882044	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	B35,B67
typical_cds_rare	Chr2	7883721	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	C68
typical_cds_rare	Chr2	7883737	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	2	C68,C87
typical_cds_rare	Chr2	7884026	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	1	A21
typical_cds_rare	Chr2	7884035	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	4	C40,C70,C73,C77
lof_cds	Chr2	7884074	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	A21,C70,C74
typical_cds_rare	Chr2	7884074	C	CG	INDEL	1bp_insertion	CDS_variant	LOC131007938	SmilChr02G000560	131007938	rna-XM_057934850.1	3	A21,C70,C74