source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	9603009	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	5	A18,B104,B40,C8,D1
typical_cds_rare	Chr2	9603009	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	5	A18,B104,B40,C8,D1
lof_cds	Chr2	9603024	A	ACT	INDEL	2bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	19	A11,B100,B126,B129,B134,B137,B43,B51,B62,B66,B7,B72,B79,B9,B91,C50,C52,C61,C7
lof_cds	Chr2	9603026	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	20	A11,B100,B126,B129,B134,B137,B43,B51,B62,B66,B7,B72,B79,B9,B91,C50,C52,C6,C61,C7
typical_cds_rare	Chr2	9603027	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B120
lof_cds	Chr2	9603034	G	GGC	INDEL	2bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B79,C7
typical_cds_rare	Chr2	9603034	G	GGC	INDEL	2bp_insertion	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B79,C7
typical_cds_rare	Chr2	9603045	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B10
lof_cds	Chr2	9603051	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	13	A20,A4,B104,B12,B126,B15,B33,B67,C15,C35,C5,C6,C77
lof_cds	Chr2	9603054	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	6	A14,A3,B5,B61,D10,D4
lof_cds	Chr2	9603056	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	8	A11,B101,B29,B51,B66,C37,C4,C6
lof_cds	Chr2	9603059	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	6	A14,A3,B5,B61,D10,D4
lof_cds	Chr2	9603060	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	8	A11,B101,B29,B51,B66,C37,C4,C6
lof_cds	Chr2	9603065	G	GC	INDEL	1bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	13	A22,A8,B1,B120,B128,B140,B17,B27,B31,B58,B65,B76,C87
typical_cds_rare	Chr2	9603102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
typical_cds_rare	Chr2	9603119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B7
lof_cds	Chr2	9603125	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	11	A11,A4,B101,B137,B29,B90,C37,C4,C52,C6,D10
lof_cds	Chr2	9603130	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	11	A11,A4,B101,B137,B29,B90,C37,C4,C52,C6,D10
lof_cds	Chr2	9603132	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	14	A24,B10,B107,B19,B20,B4,B44,C17,C18,C22,C33,C40,D3,D4
typical_cds_rare	Chr2	9603144	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B107,C27,C44
typical_cds_rare	Chr2	9603150	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	5	A21,B104,B40,B46,D1
lof_cds	Chr2	9603153	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	D10
typical_cds_rare	Chr2	9603153	C	CAT	INDEL	2bp_insertion	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	D10
lof_cds	Chr2	9603205	C	CGG	INDEL	2bp_insertion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	27	A13,A14,A19,A22,A6,A9,B110,B112,B136,B14,B29,B42,B5,B52,B56,B61,B71,B95,B96,C37,C47,C54,C76,C78,C85,D10,D4
lof_cds	Chr2	9603207	AAG	A	INDEL	2bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	24	A13,A14,A19,A22,A6,A9,B112,B136,B14,B29,B42,B5,B52,B56,B61,B95,B96,C47,C54,C76,C78,C85,D10,D4
lof_cds	Chr2	9603223	ACT	A	INDEL	2bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	28	A13,A14,A19,A22,A4,A6,A9,B101,B110,B112,B136,B14,B29,B42,B5,B52,B56,B61,B71,B90,B96,C37,C4,C47,C76,C78,D10,D4
lof_cds	Chr2	9603226	G	GA	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	28	A13,A14,A19,A22,A4,A6,A9,B101,B110,B112,B136,B14,B29,B42,B5,B52,B56,B61,B71,B90,B96,C37,C4,C47,C76,C78,D10,D4
typical_cds_rare	Chr2	9603394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B104,B137,B70
lof_cds	Chr2	9603395	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	12	A20,A4,B104,B12,B126,B15,B67,C15,C35,C5,C6,C77
lof_cds	Chr2	9603457	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	9	B120,B137,B15,B21,B61,B74,C3,C61,D5
typical_cds_rare	Chr2	9603474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B85,D6
lof_cds	Chr2	9603477	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B58,B74,C50
typical_cds_rare	Chr2	9603477	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B58,B74,C50
lof_cds	Chr2	9603490	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	13	A11,A23,B103,B140,B23,B33,B6,C15,C48,C63,C74,D2,D7
typical_cds_rare	Chr2	9603536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B42,B43
typical_cds_rare	Chr2	9603539	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	5	A23,B122,B127,C5,C8
typical_cds_rare	Chr2	9603594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B82
typical_cds_rare	Chr2	9603681	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
typical_cds_rare	Chr2	9603682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
typical_cds_rare	Chr2	9603717	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B140,B40,B72
typical_cds_rare	Chr2	9603718	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B58,B74,C50
typical_cds_rare	Chr2	9603741	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	A21,B132
typical_cds_rare	Chr2	9603750	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B85
typical_cds_rare	Chr2	9603800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
lof_cds	Chr2	9603833	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B58,B77
typical_cds_rare	Chr2	9603833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	B58,B77
typical_cds_rare	Chr2	9603849	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B58,B74,C50
typical_cds_rare	Chr2	9603865	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
lof_cds	Chr2	9603872	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B63
typical_cds_rare	Chr2	9603872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B63
lof_cds	Chr2	9603887	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	49	A14,A20,A24,B105,B120,B123,B133,B134,B135,B136,B16,B25,B35,B38,B39,B47,B50,B51,B56,B6,B60,B79,B81,B83,B93,B96,C1,C10,C13,C18,C19,C2,C20,C32,C33,C39,C43,C48,C58,C59,C61,C64,C66,C67,C68,C70,C83,C84,C9
typical_cds_rare	Chr2	9603888	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	A21
typical_cds_rare	Chr2	9603907	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B129
lof_cds	Chr2	9603931	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C57
typical_cds_rare	Chr2	9603931	GA	G	INDEL	1bp_deletion	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C57
typical_cds_rare	Chr2	9603936	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C83
typical_cds_rare	Chr2	9603967	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B59,B63,D11
typical_cds_rare	Chr2	9604001	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B41
typical_cds_rare	Chr2	9604010	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C87
typical_cds_rare	Chr2	9604030	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B140
typical_cds_rare	Chr2	9604037	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	4	B15,B9,C72,C79
lof_cds	Chr2	9604040	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C8
typical_cds_rare	Chr2	9604040	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	C8
typical_cds_rare	Chr2	9604046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B104,B137,B70
typical_cds_rare	Chr2	9604066	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	3	B107,C27,C44
typical_cds_rare	Chr2	9604088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	5	A10,B139,B82,B84,C81
typical_cds_rare	Chr2	9604114	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	4	B129,B58,B74,C50
lof_cds	Chr2	9604118	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B40
typical_cds_rare	Chr2	9604118	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	1	B40
typical_cds_rare	Chr2	9604120	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131012948	SmilChr02G000634	131012948	rna-XM_057940930.1	2	C15,D2