source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	9981217	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B108,B117,C23,C87
typical_cds_rare	Chr2	9981217	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B108,B117,C23,C87
typical_cds_rare	Chr2	9981226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B26,B47,C47,C5
lof_cds	Chr2	9981227	T	TAG	INDEL	2bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	10	A22,A9,B106,B135,B47,B6,B80,C33,C63,D6
typical_cds_rare	Chr2	9981305	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	C2
typical_cds_rare	Chr2	9981338	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B40,C78,D5
typical_cds_rare	Chr2	9981440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	B102
typical_cds_rare	Chr2	9981542	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	A14
lof_cds	Chr2	9981589	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B76,C15,C31
typical_cds_rare	Chr2	9981589	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B76,C15,C31
typical_cds_rare	Chr2	9981609	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B37,B6,C33,C63
typical_cds_rare	Chr2	9981612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B76,C15,C31,C36
typical_cds_rare	Chr2	9981616	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B76,C15,C31,C36
typical_cds_rare	Chr2	9981622	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A19,B19,B40,C56,C65
typical_cds_rare	Chr2	9981655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A24,C26,C36,C40,C43
typical_cds_rare	Chr2	9981722	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	D3
typical_cds_rare	Chr2	9981736	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B23,B38
typical_cds_rare	Chr2	9981810	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	A19,B117,B94,C49
lof_cds	Chr2	9981855	ACC	A	INDEL	2bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	23	A21,A8,B104,B108,B12,B130,B133,B134,B45,B59,B69,B78,B83,B94,B97,C15,C26,C34,C39,C49,C56,C87,D11
lof_cds	Chr2	9981862	TAC	T	INDEL	2bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	D11
typical_cds_rare	Chr2	9981862	TAC	T	INDEL	2bp_deletion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	D11
lof_cds	Chr2	9981872	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	20	A21,A8,B104,B108,B12,B130,B133,B134,B59,B69,B78,B83,B94,B97,C15,C26,C34,C39,C49,C56
typical_cds_rare	Chr2	9981913	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B65,B82
typical_cds_rare	Chr2	9981933	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	A19
lof_cds	Chr2	9981937	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	14	A25,B125,B134,B29,B3,B50,B80,C27,C29,C38,C43,C52,C63,D9
lof_cds	Chr2	9982026	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	21	A15,A2,A24,A4,B103,B112,B120,B122,B124,B45,B51,B54,B56,B90,B92,C12,C31,C47,C61,C84,C9
lof_cds	Chr2	9982051	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	D7
typical_cds_rare	Chr2	9982051	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	D7
typical_cds_rare	Chr2	9982055	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	A19,B74
typical_cds_rare	Chr2	9982145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B22,B65
typical_cds_rare	Chr2	9982238	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	A22,B6,C33,C63
typical_cds_rare	Chr2	9982278	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B10,B135
typical_cds_rare	Chr2	9982279	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B20,D2
typical_cds_rare	Chr2	9982320	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B20,D2
typical_cds_rare	Chr2	9982357	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B102,C76
lof_cds	Chr2	9982387	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	23	A4,A9,B107,B125,B13,B134,B15,B29,B3,B36,B50,B80,B94,B99,C14,C27,C29,C38,C52,C63,D4,D5,D9
lof_cds	Chr2	9982448	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	A18,B10,B135,B8
typical_cds_rare	Chr2	9982448	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	A18,B10,B135,B8
lof_cds	Chr2	9982451	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	A18,B10,B135
typical_cds_rare	Chr2	9982451	T	TCA	INDEL	2bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	A18,B10,B135
lof_cds	Chr2	9982453	A	ATC	INDEL	2bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	B8
typical_cds_rare	Chr2	9982453	A	ATC	INDEL	2bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	B8
typical_cds_rare	Chr2	9982464	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B19,C56,D3
typical_cds_rare	Chr2	9982546	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	A13
typical_cds_rare	Chr2	9982555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B37,B6,C33,C63
typical_cds_rare	Chr2	9982596	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B37,B6,C33,C63
lof_cds	Chr2	9982598	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	19	A18,B110,B122,B140,B31,B35,B50,B56,B66,B72,B77,B88,B95,C24,C29,C6,C79,C82,C9
typical_cds_rare	Chr2	9982684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B20,D2
lof_cds	Chr2	9982707	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B102,C76
typical_cds_rare	Chr2	9982707	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B102,C76
lof_cds	Chr2	9982766	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	B121,B127,B49,B53,C20
typical_cds_rare	Chr2	9982766	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	B121,B127,B49,B53,C20
typical_cds_rare	Chr2	9982804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B126,B65,C53
typical_cds_rare	Chr2	9982810	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B126,C53
typical_cds_rare	Chr2	9982838	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	B136
typical_cds_rare	Chr2	9982877	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	C56,C65,D3
lof_cds	Chr2	9982908	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	C56,C65,D3
typical_cds_rare	Chr2	9982908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	C56,C65,D3
lof_cds	Chr2	9982955	AGG	A	INDEL	2bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	14	A22,A25,B16,B3,B37,B59,B94,B99,C27,C43,C56,C63,C65,D3
typical_cds_rare	Chr2	9983122	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B19,C56
lof_cds	Chr2	9983126	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B19,C56
typical_cds_rare	Chr2	9983126	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B19,C56
lof_cds	Chr2	9983137	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B19,C56
typical_cds_rare	Chr2	9983137	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	2	B19,C56
typical_cds_rare	Chr2	9983235	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B19,C56,C65
lof_cds	Chr2	9983297	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B10,B6,C33,C63
typical_cds_rare	Chr2	9983297	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B10,B6,C33,C63
lof_cds	Chr2	9983298	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	18	A19,A20,B1,B117,B130,B134,B41,B7,B83,B94,B95,C14,C26,C27,C31,C49,C83,D2
typical_cds_rare	Chr2	9983331	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	5	A22,B10,B37,C33,C63
typical_cds_rare	Chr2	9983395	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B19,C56,C65,D3
lof_cds	Chr2	9983451	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B51,B65,B69,B89
typical_cds_rare	Chr2	9983451	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	B51,B65,B69,B89
lof_cds	Chr2	9983470	CCG	C	INDEL	2bp_deletion	frameshift_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	22	A18,B110,B122,B140,B20,B31,B35,B50,B56,B66,B72,B77,B88,B93,B95,B96,C24,C29,C6,C79,C82,C9
typical_cds_rare	Chr2	9983474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B51,B65,B89
lof_cds	Chr2	9983529	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	23	A13,A5,A9,B104,B106,B121,B126,B127,B2,B22,B24,B49,B51,B60,B65,B69,B79,B89,C19,C20,C41,C53,C71
typical_cds_rare	Chr2	9983538	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	A9,B102,C76
typical_cds_rare	Chr2	9983633	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	1	C76
typical_cds_rare	Chr2	9983677	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	4	A5,B126,B24,B53
typical_cds_rare	Chr2	9983687	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007976	SmilChr02G000657	131007976	rna-XM_057934883.1	3	B15,B36,D4