source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	11091670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B27,B57
typical_cds_rare	Chr2	11091684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B22
typical_cds_rare	Chr2	11091693	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	A24
typical_cds_rare	Chr2	11091742	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
lof_cds	Chr2	11091755	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B48
typical_cds_rare	Chr2	11091755	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B48
typical_cds_rare	Chr2	11091779	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	C17,C48
typical_cds_rare	Chr2	11091793	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	A23,A7,B30,B90,D1
typical_cds_rare	Chr2	11091800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B78
typical_cds_rare	Chr2	11091813	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	B107,B35,D9
typical_cds_rare	Chr2	11091835	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	B21,B99,C26,C73,D9
typical_cds_rare	Chr2	11091836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	4	B12,B136,B94,D10
typical_cds_rare	Chr2	11091839	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	A21,A23,B117,B22,B61
typical_cds_rare	Chr2	11091862	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B61,C75
typical_cds_rare	Chr2	11091864	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	B123,C1,C52
lof_cds	Chr2	11091869	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	11	A1,A24,B135,B25,B29,B9,C18,C40,C54,C74,D5
lof_cds	Chr2	11091870	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	149	A1,A13,A14,A16,A19,A2,A21,A23,A25,A3,B10,B100,B102,B103,B104,B11,B110,B111,B112,B114,B118,B12,B120,B121,B123,B124,B125,B127,B13,B130,B133,B134,B135,B136,B14,B140,B17,B18,B19,B2,B22,B23,B26,B27,B29,B3,B30,B31,B33,B34,B38,B39,B40,B41,B42,B43,B49,B5,B51,B53,B54,B55,B56,B57,B58,B6,B60,B61,B62,B64,B66,B67,B69,B71,B73,B76,B78,B79,B8,B80,B81,B83,B84,B85,B87,B88,B89,B90,B92,B93,B95,B97,B98,C1,C11,C12,C13,C14,C15,C17,C20,C22,C23,C24,C27,C29,C31,C34,C38,C39,C42,C43,C44,C47,C48,C5,C50,C51,C52,C53,C55,C56,C59,C60,C62,C63,C65,C68,C69,C7,C73,C74,C76,C77,C78,C79,C80,C82,C83,C84,C85,C86,D11,D4,D5,D6,D7,D8,D9
typical_cds_rare	Chr2	11091882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	A2,B117,B131,B35,C6
lof_cds	Chr2	11091888	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	30	A14,B10,B103,B12,B123,B126,B133,B134,B136,B27,B34,B38,B39,B40,B55,B60,B71,B79,B90,B92,B97,C1,C11,C12,C13,C34,C38,C63,C73,D6
lof_cds	Chr2	11091891	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	37	A15,A24,A4,B112,B119,B128,B134,B138,B18,B19,B22,B36,B38,B39,B48,B49,B50,B51,B53,B60,B63,B65,B76,B85,B91,C26,C28,C40,C49,C6,C65,C68,C87,C9,D4,D6,D7
lof_cds	Chr2	11091892	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	145	A10,A11,A13,A2,A20,A22,A24,A25,A4,A5,A6,A7,A9,B1,B10,B101,B102,B104,B105,B106,B107,B108,B109,B11,B111,B112,B115,B117,B119,B120,B122,B123,B126,B129,B13,B130,B131,B132,B134,B137,B139,B14,B140,B15,B16,B19,B2,B20,B24,B25,B26,B28,B29,B32,B33,B34,B37,B40,B41,B44,B45,B46,B47,B5,B50,B52,B53,B58,B59,B62,B63,B67,B69,B7,B70,B72,B74,B75,B77,B78,B8,B80,B82,B83,B86,B87,B90,B91,B93,B94,B95,B99,C10,C15,C16,C17,C18,C19,C20,C21,C23,C24,C25,C28,C29,C3,C30,C31,C32,C33,C35,C36,C37,C39,C4,C40,C41,C45,C46,C5,C50,C53,C55,C57,C58,C59,C61,C63,C64,C65,C66,C70,C71,C72,C73,C74,C77,C79,C8,C82,C87,C9,D1,D2,D9
typical_cds_rare	Chr2	11091901	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	A21,A25,B1
typical_cds_rare	Chr2	11091904	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B14,C40
lof_cds	Chr2	11091908	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	92	A1,A16,A2,A23,A3,B102,B11,B110,B111,B114,B118,B121,B124,B125,B127,B13,B130,B135,B136,B14,B140,B18,B22,B23,B29,B3,B30,B31,B33,B41,B43,B49,B51,B53,B54,B56,B57,B61,B64,B66,B67,B69,B71,B73,B78,B79,B8,B81,B83,B84,B87,B88,B89,B93,B95,B97,B98,C11,C14,C15,C17,C20,C23,C27,C29,C39,C42,C43,C44,C47,C48,C51,C55,C56,C60,C62,C65,C69,C7,C74,C77,C79,C80,C83,C84,C85,C86,D4,D5,D7,D8,D9
lof_cds	Chr2	11091916	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	118	A1,A14,A16,A19,A2,A23,B102,B11,B110,B111,B114,B121,B123,B124,B125,B126,B127,B13,B130,B133,B134,B135,B136,B14,B140,B18,B22,B23,B27,B29,B3,B30,B31,B33,B34,B38,B39,B40,B41,B43,B49,B51,B53,B54,B55,B56,B57,B60,B61,B64,B66,B67,B69,B71,B73,B76,B78,B79,B8,B80,B81,B83,B84,B87,B88,B89,B92,B93,B95,B97,B98,C1,C11,C12,C13,C14,C15,C17,C20,C23,C27,C29,C34,C38,C39,C42,C43,C44,C46,C47,C48,C50,C51,C52,C53,C55,C56,C60,C62,C63,C64,C67,C68,C69,C7,C74,C76,C79,C80,C83,C84,C85,C86,D4,D5,D6,D8,D9
lof_cds	Chr2	11091934	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	40	A16,A8,B1,B124,B125,B128,B137,B140,B17,B18,B21,B22,B26,B37,B57,B61,B69,B71,B78,B8,B80,B86,B93,B98,C2,C26,C3,C31,C40,C42,C45,C48,C58,C7,C71,C79,C8,C84,D10,D5
lof_cds	Chr2	11091983	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	189	A11,A13,A15,A16,A18,A2,A20,A22,A25,A4,A5,A6,A7,B1,B10,B100,B101,B102,B104,B105,B106,B107,B108,B109,B11,B111,B112,B114,B117,B118,B119,B12,B122,B124,B125,B126,B128,B129,B130,B131,B132,B134,B135,B136,B139,B14,B140,B15,B16,B17,B19,B2,B20,B21,B22,B23,B24,B25,B26,B27,B28,B29,B3,B30,B31,B32,B33,B34,B36,B39,B40,B41,B44,B45,B46,B47,B48,B49,B5,B50,B52,B53,B55,B57,B59,B62,B63,B64,B65,B67,B68,B69,B7,B70,B72,B73,B74,B75,B77,B78,B79,B8,B80,B82,B83,B84,B87,B88,B89,B9,B90,B91,B92,B93,B94,B96,B97,B98,B99,C10,C11,C12,C13,C14,C15,C16,C17,C18,C19,C2,C20,C21,C23,C24,C25,C29,C3,C30,C31,C33,C34,C35,C36,C37,C38,C39,C4,C40,C41,C43,C44,C45,C46,C47,C5,C50,C52,C53,C55,C56,C57,C58,C59,C60,C61,C63,C64,C65,C66,C68,C69,C70,C71,C72,C73,C77,C78,C79,C8,C80,C82,C83,C87,D2,D4,D6,D7,D8,D9
lof_cds	Chr2	11091985	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	11	A8,B121,B23,B24,B26,B33,B40,B42,B49,B8,C21
lof_cds	Chr2	11091988	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	6	A25,B14,B23,B81,C44,D8
typical_cds_rare	Chr2	11091991	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	B48,B8,B80,B95,C42
typical_cds_rare	Chr2	11092013	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
lof_cds	Chr2	11092028	T	TA	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C34
typical_cds_rare	Chr2	11092028	T	TA	INDEL	1bp_insertion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C34
lof_cds	Chr2	11092030	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
typical_cds_rare	Chr2	11092030	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
lof_cds	Chr2	11092031	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	B121,B47,D5
typical_cds_rare	Chr2	11092031	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	B121,B47,D5
lof_cds	Chr2	11092044	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	18	A1,A24,B128,B135,B139,B27,B3,B42,B43,B51,B69,B91,C18,C22,C54,C70,C74,D5
typical_cds_rare	Chr2	11092057	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B128,C82
lof_cds	Chr2	11092069	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	51	A1,A14,A16,A22,A23,A3,A4,A6,B103,B119,B126,B127,B29,B39,B47,B56,B59,B61,B67,B69,B7,B74,B75,B8,B83,B85,B87,B89,B93,B97,C10,C20,C29,C32,C38,C39,C41,C52,C55,C59,C60,C71,C73,C74,C76,C77,C82,C9,D5,D8,D9
typical_cds_rare	Chr2	11092083	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B127
typical_cds_rare	Chr2	11092088	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	4	A21,B49,B79,C25
typical_cds_rare	Chr2	11092089	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	4	B113,B140,C82,D7
typical_cds_rare	Chr2	11092122	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B4,C57
typical_cds_rare	Chr2	11092144	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	B104,B23,B4,C27,C44
lof_cds	Chr2	11092147	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	11	B100,B111,B123,B31,B47,B54,B71,B73,B81,C23,D8
lof_cds	Chr2	11092151	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	43	A16,A22,A3,A4,A6,A9,B101,B103,B126,B127,B131,B19,B29,B38,B39,B47,B56,B59,B64,B67,B69,B7,B74,B75,B83,B85,B87,B97,C10,C30,C38,C39,C41,C44,C51,C59,C6,C60,C73,C76,C77,D2,D8
typical_cds_rare	Chr2	11092191	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B54
typical_cds_rare	Chr2	11092199	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B45,C63
lof_cds	Chr2	11092223	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
typical_cds_rare	Chr2	11092223	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	D10
lof_cds	Chr2	11092224	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	16	A1,A16,A19,A24,B16,B26,B27,B34,B43,B91,C21,C39,C40,C54,C70,C75
typical_cds_rare	Chr2	11092234	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C63
lof_cds	Chr2	11092279	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	22	B103,B106,B114,B34,B35,B39,B5,B61,B64,B91,C13,C30,C39,C4,C5,C6,C62,C67,C72,C73,C9,D8
typical_cds_rare	Chr2	11092380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	C16,C6
typical_cds_rare	Chr2	11092388	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	C11,C20
typical_cds_rare	Chr2	11092413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	D10,D4
lof_cds	Chr2	11092422	G	GCA	INDEL	2bp_insertion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	A1
typical_cds_rare	Chr2	11092422	G	GCA	INDEL	2bp_insertion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	A1
lof_cds	Chr2	11092437	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	9	A11,B133,B50,C24,C34,C50,C69,D5,D6
lof_cds	Chr2	11092464	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	10	A11,A2,A3,A9,B114,B57,B60,B80,C15,D4
typical_cds_rare	Chr2	11092470	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	4	B10,B86,B99,C6
typical_cds_rare	Chr2	11092499	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	5	A20,A23,B45,C43,D1
lof_cds	Chr2	11092558	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	A20,B45
typical_cds_rare	Chr2	11092558	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	A20,B45
lof_cds	Chr2	11092568	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	14	A23,B117,B128,B14,B24,B25,B38,B39,B98,C59,C70,C71,C82,C84
typical_cds_rare	Chr2	11092572	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B45,C70
typical_cds_rare	Chr2	11092580	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C70
typical_cds_rare	Chr2	11092587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C70
typical_cds_rare	Chr2	11092635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	2	B94,C45
typical_cds_rare	Chr2	11092636	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	C61
typical_cds_rare	Chr2	11092651	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	3	B94,C45,C87
typical_cds_rare	Chr2	11092655	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131007560	SmilChr02G000696	131007560	rna-XM_057934471.1	1	B127
