source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	12192308	TGG	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	104	A13,A15,A16,A21,A22,A3,A5,A6,A8,B1,B10,B101,B106,B107,B111,B112,B117,B12,B123,B124,B126,B128,B129,B130,B131,B139,B14,B17,B20,B23,B26,B28,B33,B34,B37,B38,B4,B40,B41,B43,B46,B51,B53,B54,B57,B58,B59,B61,B64,B66,B67,B68,B70,B71,B72,B74,B77,B8,B82,B83,B87,B89,B9,B90,B92,B95,B99,C12,C14,C15,C18,C21,C22,C23,C25,C28,C32,C33,C34,C36,C38,C39,C4,C40,C44,C47,C50,C51,C52,C53,C54,C64,C65,C67,C68,C72,C76,C80,C86,C87,C9,D2,D4,D6
lof_cds	Chr2	12192316	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A11,A25,B13
typical_cds_rare	Chr2	12192316	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A11,A25,B13
typical_cds_rare	Chr2	12192326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B117,B23,B37,B80,C71
typical_cds_rare	Chr2	12192339	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A8,B12,C28
typical_cds_rare	Chr2	12192349	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A8,B12,C28
lof_cds	Chr2	12192355	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B77,C18,C67
typical_cds_rare	Chr2	12192355	TAA	T	INDEL	2bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B77,C18,C67
typical_cds_rare	Chr2	12192368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B109
lof_cds	Chr2	12192385	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	19	A8,B106,B107,B124,B135,B139,B17,B26,B40,B46,B68,B89,B98,B99,C25,C32,C38,C47,C48
lof_cds	Chr2	12192393	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	6	B114,B2,B48,C20,C58,C83
lof_cds	Chr2	12192405	A	ACG	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A9,B23,D5
typical_cds_rare	Chr2	12192405	A	ACG	INDEL	2bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A9,B23,D5
typical_cds_rare	Chr2	12192408	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B114,B2,B48,C20,C83
typical_cds_rare	Chr2	12192450	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B129,B57,B90,C36,C42
lof_cds	Chr2	12192454	A	ACC	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	C62,C76
typical_cds_rare	Chr2	12192454	A	ACC	INDEL	2bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	C62,C76
lof_cds	Chr2	12192457	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	13	A3,B118,B129,B57,B82,B90,C14,C21,C34,C36,C50,C51,D8
lof_cds	Chr2	12192474	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	C62,C76
typical_cds_rare	Chr2	12192474	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	C62,C76
typical_cds_rare	Chr2	12192479	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D4
typical_cds_rare	Chr2	12192492	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	A3,B109,B115,C14,C36
typical_cds_rare	Chr2	12192527	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	A11,A25,B13,D11
typical_cds_rare	Chr2	12192533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B104,B31
typical_cds_rare	Chr2	12192536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B44,C19,C31,C35
typical_cds_rare	Chr2	12192544	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B51,B65,B89
typical_cds_rare	Chr2	12192580	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B32,C87
typical_cds_rare	Chr2	12192610	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B44,C19,C31,C35
typical_cds_rare	Chr2	12192619	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	A11
lof_cds	Chr2	12192655	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B54,B65,B84
typical_cds_rare	Chr2	12192655	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B54,B65,B84
lof_cds	Chr2	12192685	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	17	A4,A9,B100,B122,B140,B19,B22,B78,C11,C17,C30,C35,C45,C46,C53,C69,C74
lof_cds	Chr2	12192703	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	6	B101,B63,B83,C46,C82,D7
lof_cds	Chr2	12192717	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	9	B16,B66,B8,B93,C14,C29,C43,C7,D9
lof_cds	Chr2	12192730	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	98	A1,A13,A16,A18,A19,A2,A22,A23,A6,A8,A9,B100,B102,B103,B105,B109,B111,B117,B119,B121,B122,B123,B127,B128,B129,B131,B133,B137,B18,B21,B31,B35,B36,B4,B49,B5,B54,B55,B56,B59,B6,B65,B68,B71,B73,B74,B76,B79,B81,B85,B87,B88,B9,B90,B92,B94,B96,B99,C1,C11,C13,C18,C21,C22,C23,C26,C28,C29,C30,C33,C34,C37,C40,C42,C47,C49,C50,C51,C54,C60,C61,C65,C67,C69,C7,C74,C75,C76,C78,C81,C83,C84,C85,C86,C9,D2,D5,D8
typical_cds_rare	Chr2	12192762	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B104,B31
typical_cds_rare	Chr2	12192778	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D5
lof_cds	Chr2	12192797	G	GTT	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D5
typical_cds_rare	Chr2	12192797	G	GTT	INDEL	2bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D5
typical_cds_rare	Chr2	12192798	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B101,B108,B27,C43
typical_cds_rare	Chr2	12192800	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B104
lof_cds	Chr2	12192801	GCT	G	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D5
typical_cds_rare	Chr2	12192801	GCT	G	INDEL	2bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D5
typical_cds_rare	Chr2	12192850	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A20,B133,C15
typical_cds_rare	Chr2	12192908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B63,B83,C46,D10
typical_cds_rare	Chr2	12192938	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	D10
typical_cds_rare	Chr2	12192939	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	C19,C31,C35
typical_cds_rare	Chr2	12192944	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B1,B132,B16,B5,B69
lof_cds	Chr2	12192945	ATC	A	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B63,B83,D10
typical_cds_rare	Chr2	12192945	ATC	A	INDEL	2bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B63,B83,D10
typical_cds_rare	Chr2	12192955	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B63,B83,D10
typical_cds_rare	Chr2	12192993	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B120,B62,B75
typical_cds_rare	Chr2	12193013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B63,B83,D10
typical_cds_rare	Chr2	12193017	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	C82
typical_cds_rare	Chr2	12193039	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B45
typical_cds_rare	Chr2	12193056	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B44,C19,C31,C35
typical_cds_rare	Chr2	12193070	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B79
typical_cds_rare	Chr2	12193089	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	A10,B118,B68,C82
lof_cds	Chr2	12193109	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B40,C18,C65
typical_cds_rare	Chr2	12193109	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B40,C18,C65
lof_cds	Chr2	12193117	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	46	A1,A13,A24,A4,A8,B108,B109,B117,B118,B123,B129,B130,B18,B19,B23,B24,B25,B3,B37,B41,B52,B53,B58,B61,B75,B81,B83,B86,B9,B98,B99,C1,C15,C23,C24,C27,C28,C30,C59,C64,C66,C70,C79,C8,D10,D9
lof_cds	Chr2	12193140	T	TGA	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B11,B2,B82,C71,D5
typical_cds_rare	Chr2	12193140	T	TGA	INDEL	2bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B11,B2,B82,C71,D5
lof_cds	Chr2	12193150	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B11,B2,B82,C71,D5
typical_cds_rare	Chr2	12193150	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B11,B2,B82,C71,D5
lof_cds	Chr2	12193160	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B106,B69,B82,C59
typical_cds_rare	Chr2	12193160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B106,B69,B82,C59
typical_cds_rare	Chr2	12193168	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A1,A13,B117
typical_cds_rare	Chr2	12193195	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B33,D10
lof_cds	Chr2	12193197	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	58	A16,A22,A23,A4,A8,B102,B112,B119,B122,B126,B129,B131,B132,B134,B140,B26,B29,B3,B40,B42,B43,B55,B57,B60,B7,B71,B75,B80,B81,B83,B89,B91,B93,C11,C12,C19,C20,C3,C32,C35,C45,C47,C49,C6,C61,C62,C68,C7,C71,C72,C77,C79,C82,C84,C85,C86,D5,D8
typical_cds_rare	Chr2	12193210	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	5	B134,B137,C11,C12,C69
typical_cds_rare	Chr2	12193211	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B33,D10
typical_cds_rare	Chr2	12193250	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	A11,A25,B13,D11
typical_cds_rare	Chr2	12193260	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	C6
typical_cds_rare	Chr2	12193262	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	A11,A25,B13,D11
lof_cds	Chr2	12193302	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A20,B133,C15
typical_cds_rare	Chr2	12193302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	A20,B133,C15
lof_cds	Chr2	12193318	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	30	A13,A22,A23,A9,B102,B106,B111,B118,B129,B23,B31,B40,B53,B55,B56,B72,B77,B81,B82,B95,C15,C20,C24,C55,C66,C70,C71,C8,C85,D7
lof_cds	Chr2	12193336	TTG	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	12	A1,B102,B114,B129,B2,B26,B33,B74,B78,B98,C20,C52
typical_cds_rare	Chr2	12193541	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B139,B98
lof_cds	Chr2	12193559	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B139
typical_cds_rare	Chr2	12193559	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B139
lof_cds	Chr2	12193566	G	GT	INDEL	1bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B139
typical_cds_rare	Chr2	12193566	G	GT	INDEL	1bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B139
lof_cds	Chr2	12193567	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B40,B50,B72
typical_cds_rare	Chr2	12193567	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B40,B50,B72
lof_cds	Chr2	12193590	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	10	A24,B139,B35,B52,B98,C21,C25,C50,C63,C74
lof_cds	Chr2	12193591	TAG	T	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B107,B17,B50,C14
typical_cds_rare	Chr2	12193591	TAG	T	INDEL	2bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	4	B107,B17,B50,C14
lof_cds	Chr2	12193597	T	TGG	INDEL	2bp_insertion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B40
typical_cds_rare	Chr2	12193597	T	TGG	INDEL	2bp_insertion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B40
lof_cds	Chr2	12193599	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B40
typical_cds_rare	Chr2	12193599	GCA	G	INDEL	2bp_deletion	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	1	B40
typical_cds_rare	Chr2	12193621	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	2	B104,B31
typical_cds_rare	Chr2	12193640	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008004	SmilChr02G000750	131008004	rna-XM_057934909.1	3	B18,C8,C84