source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	12835063	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	C2,C40
typical_cds_rare	Chr2	12835063	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	C2,C40
typical_cds_rare	Chr2	12835120	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	A18,B88,C61,C72
typical_cds_rare	Chr2	12835130	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C46
lof_cds	Chr2	12835153	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	39	A14,A25,A6,B10,B107,B109,B135,B138,B34,B37,B40,B41,B52,B59,B61,B64,B8,B86,B90,B94,B97,C12,C24,C26,C28,C3,C31,C40,C50,C51,C56,C59,C61,C64,C77,C78,C84,C87,D9
lof_cds	Chr2	12835168	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	41	A14,A25,A6,B10,B107,B109,B135,B138,B34,B37,B40,B41,B52,B59,B61,B64,B8,B83,B86,B90,B94,B97,C12,C22,C24,C26,C28,C3,C31,C40,C50,C51,C56,C59,C61,C64,C77,C78,C84,C87,D9
lof_cds	Chr2	12835185	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B119,C51,D9
typical_cds_rare	Chr2	12835185	CAA	C	INDEL	2bp_deletion	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B119,C51,D9
typical_cds_rare	Chr2	12835205	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	5	B50,B66,C45,C56,C65
lof_cds	Chr2	12835207	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	8	A22,B29,B37,B5,B6,B97,C30,C63
typical_cds_rare	Chr2	12835226	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B107,B30,D9
typical_cds_rare	Chr2	12835236	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	C56,C65
typical_cds_rare	Chr2	12835250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B115
lof_cds	Chr2	12835257	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	9	A25,A6,B105,B3,B40,B68,B73,C29,C63
typical_cds_rare	Chr2	12835274	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12835345	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	C2,C40,C43
typical_cds_rare	Chr2	12835358	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C45
typical_cds_rare	Chr2	12835385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B59
typical_cds_rare	Chr2	12835394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	A20,B52,C31
typical_cds_rare	Chr2	12835547	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12835587	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B107
typical_cds_rare	Chr2	12835608	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
lof_cds	Chr2	12835634	GTT	G	INDEL	2bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	14	B1,B114,B35,B47,B64,B69,B8,B84,B9,C17,C21,C4,C46,C53
lof_cds	Chr2	12835639	TA	T	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	74	A18,A20,A3,A5,A6,B1,B102,B105,B11,B114,B125,B131,B133,B138,B139,B15,B3,B35,B4,B40,B47,B48,B53,B54,B57,B61,B63,B64,B66,B67,B68,B69,B73,B8,B80,B84,B88,B9,B91,B95,C14,C15,C17,C19,C21,C22,C24,C26,C29,C3,C36,C37,C4,C44,C45,C46,C51,C53,C57,C61,C63,C64,C66,C70,C72,C76,C77,C85,C9,D10,D3,D4,D6,D7
lof_cds	Chr2	12835649	C	CCA	INDEL	2bp_insertion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	10	A10,B103,B106,B118,B130,B137,B139,C36,C71,C81
lof_cds	Chr2	12835686	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	7	B117,B125,B31,B90,B92,C14,C87
lof_cds	Chr2	12835719	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12835719	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
lof_cds	Chr2	12835727	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	10	A25,A6,B105,B3,B40,B61,B68,B73,C29,C63
typical_cds_rare	Chr2	12835742	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12835756	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C2
lof_cds	Chr2	12835817	G	GTC	INDEL	2bp_insertion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	19	A18,B100,B120,B127,B14,B20,B27,B72,C17,C24,C34,C46,C47,C50,C54,C56,C65,C74,C9
typical_cds_rare	Chr2	12835861	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12835925	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
lof_cds	Chr2	12835927	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	65	A13,A14,A18,A25,A6,A7,B10,B100,B103,B106,B107,B109,B11,B113,B121,B134,B138,B19,B34,B40,B41,B45,B5,B52,B59,B61,B64,B7,B72,B73,B8,B80,B83,B86,B87,B90,B92,B94,B97,C10,C12,C15,C20,C24,C26,C28,C3,C31,C38,C40,C50,C51,C56,C59,C61,C64,C66,C77,C78,C81,C83,C84,D1,D2,D9
typical_cds_rare	Chr2	12836095	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	A5,B101,B26
typical_cds_rare	Chr2	12836168	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B97
lof_cds	Chr2	12836185	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	23	A14,A22,A9,B102,B112,B119,B20,B37,B42,B43,B51,B6,B65,B83,B89,B97,C18,C30,C32,C38,C43,C63,C68
typical_cds_rare	Chr2	12836215	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	C56,C65
typical_cds_rare	Chr2	12836216	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	A20,B52,C31
typical_cds_rare	Chr2	12836246	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12836247	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	B18,B63,C41,D8
lof_cds	Chr2	12836293	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	11	A10,B103,B106,B118,B130,B137,B139,C36,C45,C71,C81
lof_cds	Chr2	12836335	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	14	B100,B120,B127,B14,B27,C17,C24,C34,C40,C47,C50,C54,C74,C9
lof_cds	Chr2	12836409	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B49
typical_cds_rare	Chr2	12836409	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B49
lof_cds	Chr2	12836410	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	53	A11,A13,A15,A2,A24,B1,B105,B111,B115,B119,B122,B123,B124,B129,B13,B131,B136,B140,B17,B19,B22,B35,B36,B47,B51,B59,B6,B7,B86,B87,B89,B91,C1,C10,C2,C25,C27,C31,C32,C35,C37,C39,C4,C48,C61,C65,C67,C68,C71,C75,C76,C86,D8
typical_cds_rare	Chr2	12836420	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B1
typical_cds_rare	Chr2	12836440	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B20,B72,C46
lof_cds	Chr2	12836462	AAT	A	INDEL	2bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12836462	AAT	A	INDEL	2bp_deletion	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12836467	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	D11
lof_cds	Chr2	12836471	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12836471	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
lof_cds	Chr2	12836472	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	38	A11,A13,A15,A18,A2,A24,B107,B111,B115,B119,B122,B129,B13,B131,B136,B19,B35,B47,B49,B59,B86,B89,B91,C1,C23,C27,C35,C37,C39,C4,C48,C61,C65,C71,C75,C76,D8,D9
typical_cds_rare	Chr2	12836474	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	B125,B90,B92,C87
lof_cds	Chr2	12836489	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	25	A10,B110,B133,B134,B21,B29,B31,B34,B41,B50,B61,B66,B69,B73,B75,B77,B78,B81,B93,C20,C29,C6,C79,D11,D4
typical_cds_rare	Chr2	12836536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	C56,C65
typical_cds_rare	Chr2	12836537	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	A5,B101,B26
lof_cds	Chr2	12836576	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12836576	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	C35
typical_cds_rare	Chr2	12836594	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B3
typical_cds_rare	Chr2	12836600	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	B36,C69
typical_cds_rare	Chr2	12836633	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	B36,B78,C36,C69
typical_cds_rare	Chr2	12836643	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	B36,B78,C36,C69
typical_cds_rare	Chr2	12836647	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	B106,C71
typical_cds_rare	Chr2	12836669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	5	B36,B51,B78,B88,C69
typical_cds_rare	Chr2	12836670	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B97
lof_cds	Chr2	12836726	A	AAG	INDEL	2bp_insertion	frameshift_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	7	A10,B110,B31,B77,C29,C6,C79
typical_cds_rare	Chr2	12836765	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	B109,B82,D2
typical_cds_rare	Chr2	12836787	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	1	B83
lof_cds	Chr2	12836804	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	5	B36,B51,B72,B93,C33
typical_cds_rare	Chr2	12836804	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	5	B36,B51,B72,B93,C33
typical_cds_rare	Chr2	12836814	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	5	B36,B51,B72,B93,C33
lof_cds	Chr2	12836880	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	64	A13,A14,A18,A25,A6,A7,B10,B100,B103,B107,B11,B113,B117,B121,B125,B134,B135,B138,B19,B29,B31,B34,B37,B40,B41,B5,B52,B59,B61,B7,B73,B83,B86,B90,B92,B94,B97,C10,C12,C14,C15,C20,C24,C26,C28,C3,C31,C35,C38,C40,C50,C51,C56,C59,C64,C66,C77,C78,C81,C83,C84,C87,D2,D9
typical_cds_rare	Chr2	12836882	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	2	B106,B130
typical_cds_rare	Chr2	12836907	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	4	B20,B72,C46,D7
typical_cds_rare	Chr2	12836919	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008013	SmilChr02G000781	131008013	rna-XM_057934918.1	3	A5,B101,B26