source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	15256490	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	20	A22,B100,B12,B2,B32,B37,B56,B6,B64,B75,B96,C22,C27,C32,C43,C63,C68,C74,C83,C87
typical_cds_rare	Chr2	15256508	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	4	C22,C67,C75,C87
typical_cds_rare	Chr2	15256515	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	5	C22,C67,C75,C79,C87
typical_cds_rare	Chr2	15256523	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	4	B32,B75,C22,C87
typical_cds_rare	Chr2	15256543	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	B11,B83
lof_cds	Chr2	15256568	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	39	A11,A21,A22,A3,B102,B106,B109,B110,B117,B130,B139,B14,B18,B21,B34,B42,B50,B53,B55,B6,B61,B63,B66,B67,B73,B76,B83,B86,B87,B91,B95,C31,C53,C55,C57,C63,C71,C76,C82
lof_cds	Chr2	15256571	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	40	A11,A21,A22,A3,B102,B106,B109,B110,B117,B130,B139,B14,B18,B21,B34,B42,B50,B53,B55,B6,B61,B63,B66,B67,B73,B76,B83,B86,B87,B91,B95,C27,C31,C53,C55,C57,C63,C71,C76,C82
typical_cds_rare	Chr2	15256592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
typical_cds_rare	Chr2	15256595	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B34,B62,C66
typical_cds_rare	Chr2	15256598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B34,B62,C66
typical_cds_rare	Chr2	15256614	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B34,C66,C87
typical_cds_rare	Chr2	15256623	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B34,C22,C66
lof_cds	Chr2	15256624	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B107,B13,B32
typical_cds_rare	Chr2	15256624	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B107,B13,B32
lof_cds	Chr2	15256636	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B34
typical_cds_rare	Chr2	15256636	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B34
typical_cds_rare	Chr2	15256646	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	C22,C66
lof_cds	Chr2	15256657	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	56	A14,A15,A18,A23,A3,A6,B105,B106,B107,B109,B11,B119,B120,B136,B138,B139,B19,B21,B29,B31,B35,B42,B43,B45,B46,B53,B54,B55,B57,B65,B66,B69,B71,B84,B88,B89,B91,C15,C17,C24,C29,C38,C43,C49,C51,C54,C57,C6,C61,C77,C79,C9,D10,D4,D6,D9
typical_cds_rare	Chr2	15256697	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
typical_cds_rare	Chr2	15256800	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
typical_cds_rare	Chr2	15256805	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
lof_cds	Chr2	15256812	GA	G	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	18	A15,B114,B47,B56,B63,B64,B8,B83,B96,C21,C4,C40,C46,C52,C57,C84,D1,D9
typical_cds_rare	Chr2	15256819	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B40
typical_cds_rare	Chr2	15256821	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	C28
lof_cds	Chr2	15256828	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	17	A5,A6,A7,B111,B117,B120,B47,B73,B9,C15,C33,C51,C76,C79,C9,D11,D5
lof_cds	Chr2	15256838	TCG	T	INDEL	2bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B41
typical_cds_rare	Chr2	15256838	TCG	T	INDEL	2bp_deletion	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B41
lof_cds	Chr2	15256840	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	18	A25,A6,A7,B108,B11,B117,B138,B139,B66,B67,B73,B80,B9,C2,C6,C71,C79,C9
lof_cds	Chr2	15256860	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D11
typical_cds_rare	Chr2	15256860	AT	A	INDEL	1bp_deletion	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D11
typical_cds_rare	Chr2	15256906	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D10
lof_cds	Chr2	15256927	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	17	A5,B111,B120,B125,B139,B26,B28,B47,B59,C15,C33,C38,C51,C68,C69,C85,D5
typical_cds_rare	Chr2	15256957	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D11
lof_cds	Chr2	15256976	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	98	A10,A11,A13,A16,A19,A24,A3,A5,B1,B102,B103,B105,B110,B111,B117,B118,B123,B124,B128,B129,B130,B132,B133,B134,B136,B137,B139,B140,B15,B17,B20,B21,B22,B26,B31,B35,B36,B37,B38,B39,B47,B51,B53,B55,B6,B69,B7,B71,B72,B74,B75,B78,B80,B82,B85,B87,B88,B94,B98,C10,C11,C14,C2,C20,C23,C25,C3,C31,C32,C33,C39,C41,C42,C45,C48,C49,C5,C51,C53,C55,C56,C58,C62,C64,C65,C66,C67,C68,C69,C7,C72,C74,C8,C87,D3,D5,D7,D8
lof_cds	Chr2	15256978	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	6	A4,B45,B90,B92,C12,C47
lof_cds	Chr2	15256979	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	98	A10,A11,A13,A16,A19,A24,A3,A5,B1,B102,B103,B105,B110,B111,B117,B118,B123,B124,B128,B129,B130,B132,B133,B134,B136,B137,B139,B140,B15,B17,B20,B21,B22,B26,B31,B35,B36,B37,B38,B39,B47,B51,B53,B55,B6,B69,B7,B71,B72,B74,B75,B78,B80,B82,B85,B87,B88,B94,B98,C10,C11,C14,C2,C20,C23,C25,C3,C31,C32,C33,C39,C41,C42,C45,C48,C49,C5,C51,C53,C55,C56,C58,C62,C64,C65,C66,C67,C68,C69,C7,C72,C74,C8,C87,D3,D5,D7,D8
typical_cds_rare	Chr2	15256989	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B93
typical_cds_rare	Chr2	15257000	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	5	B127,B32,B75,C22,C87
typical_cds_rare	Chr2	15257013	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
lof_cds	Chr2	15257023	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	76	A1,A16,A20,A23,A25,A7,A8,B10,B101,B104,B107,B11,B113,B120,B121,B122,B125,B127,B128,B129,B13,B131,B135,B14,B15,B23,B25,B27,B3,B33,B38,B39,B4,B40,B48,B5,B50,B61,B66,B67,B68,B70,B73,B74,B76,B77,B79,B8,B81,B83,B91,B93,B95,B97,B98,C13,C26,C27,C28,C29,C3,C30,C36,C44,C46,C5,C54,C55,C59,C63,C70,C80,C82,C9,D10,D11
typical_cds_rare	Chr2	15257026	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B93
typical_cds_rare	Chr2	15257054	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	C10,C31
typical_cds_rare	Chr2	15257066	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B93,C10,C31
typical_cds_rare	Chr2	15257069	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B135
typical_cds_rare	Chr2	15257080	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	C10,C31
lof_cds	Chr2	15257154	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	10	A25,B122,B128,B13,B61,B73,B8,B81,C29,C63
lof_cds	Chr2	15257160	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	10	A25,B122,B128,B13,B61,B73,B8,B81,C29,C63
typical_cds_rare	Chr2	15257183	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D4
typical_cds_rare	Chr2	15257190	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	3	B52,C24,C46
typical_cds_rare	Chr2	15257198	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B40
lof_cds	Chr2	15257205	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D10
typical_cds_rare	Chr2	15257205	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D10
typical_cds_rare	Chr2	15257210	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	C1,D11
lof_cds	Chr2	15257214	A	AG	INDEL	1bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	17	B102,B108,B117,B131,B16,B5,B50,B60,B67,B86,B91,C21,C31,C43,C60,C64,C79
typical_cds_rare	Chr2	15257215	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	A13,A24
typical_cds_rare	Chr2	15257257	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D11
typical_cds_rare	Chr2	15257266	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	4	B114,B140,B95,C14
lof_cds	Chr2	15257267	T	TTC	INDEL	2bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	21	A18,A22,B100,B12,B127,B2,B32,B37,B6,B64,B75,B96,C22,C27,C32,C43,C63,C68,C74,C83,C87
typical_cds_rare	Chr2	15257280	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	5	B16,B52,B95,C24,C60
lof_cds	Chr2	15257343	G	GCT	INDEL	2bp_insertion	frameshift_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B40
typical_cds_rare	Chr2	15257343	G	GCT	INDEL	2bp_insertion	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B40
typical_cds_rare	Chr2	15257368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	B30
typical_cds_rare	Chr2	15257380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	D10,D11
typical_cds_rare	Chr2	15257440	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D10
typical_cds_rare	Chr2	15257452	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	1	D8
typical_cds_rare	Chr2	15257455	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	2	A13,A24
lof_cds	Chr2	15257484	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008043	SmilChr02G000885	131008043	rna-XM_057934945.1	10	A1,A23,B33,B46,B70,B76,B82,B98,C55,C60