source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	17005806	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B46,D8
typical_cds_rare	Chr2	17005844	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B104,B89,C75
typical_cds_rare	Chr2	17005866	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B118,B72,B78,C74
typical_cds_rare	Chr2	17005873	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B140,B42,D1
typical_cds_rare	Chr2	17005875	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B39,B73
typical_cds_rare	Chr2	17005908	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B25,B59,C40,D8
lof_cds	Chr2	17005929	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B117,B122,C16,C61
typical_cds_rare	Chr2	17005929	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B117,B122,C16,C61
typical_cds_rare	Chr2	17005988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B69,B87,C28,C61,D9
typical_cds_rare	Chr2	17005993	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	A9,B10,B82,C76
lof_cds	Chr2	17005998	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	81	A10,A11,A15,A19,A20,A23,A3,A4,A7,A8,B102,B103,B11,B113,B114,B117,B12,B120,B121,B125,B131,B133,B137,B18,B19,B2,B20,B27,B3,B31,B32,B37,B46,B50,B51,B55,B58,B61,B69,B7,B70,B74,B77,B78,B81,B84,B85,B86,B89,B97,C1,C14,C2,C21,C31,C36,C4,C41,C42,C43,C45,C46,C50,C51,C59,C6,C62,C63,C65,C71,C73,C74,C77,C81,C82,C83,C85,C87,D11,D3,D6
lof_cds	Chr2	17006014	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	10	B102,B119,B21,B22,B30,C1,C15,C67,C82,C9
typical_cds_rare	Chr2	17006028	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	A16,A21,B125
typical_cds_rare	Chr2	17006038	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B43,C25,C87,D7
typical_cds_rare	Chr2	17006039	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	A5,B13,B87,C1,C72
typical_cds_rare	Chr2	17006056	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B1,B71,C58,D10,D11
typical_cds_rare	Chr2	17006084	TC	*	INDEL	1bp_deletion	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B90,C44
lof_cds	Chr2	17006088	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	20	A2,A22,B124,B23,B28,B41,B47,B68,B81,B92,C17,C33,C45,C53,C59,C60,C63,C80,D11,D3
lof_cds	Chr2	17006093	G	GGT	INDEL	2bp_insertion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	20	A2,A22,B124,B23,B28,B41,B47,B68,B81,B92,C17,C33,C45,C53,C59,C60,C63,C80,D11,D3
lof_cds	Chr2	17006100	C	CG	INDEL	1bp_insertion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	20	A2,A22,B124,B23,B28,B41,B47,B68,B81,B92,C17,C33,C45,C46,C53,C59,C60,C63,C80,D11
typical_cds_rare	Chr2	17006239	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B125,B43
typical_cds_rare	Chr2	17006259	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B40
lof_cds	Chr2	17006273	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	A1,B26,C3,C37
typical_cds_rare	Chr2	17006273	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	A1,B26,C3,C37
typical_cds_rare	Chr2	17006289	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B120,C59,C8
typical_cds_rare	Chr2	17006291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	A1,B26,C3
typical_cds_rare	Chr2	17006334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	A20,B16,B18,C87,D4
typical_cds_rare	Chr2	17006368	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B14,B90,B92,C34,C75
typical_cds_rare	Chr2	17006373	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B15,B37,C8
lof_cds	Chr2	17006384	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	6	B34,B41,B77,C16,C43,C85
typical_cds_rare	Chr2	17006385	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	A16,B129,B34,B46,C12
typical_cds_rare	Chr2	17006401	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B46,B97,C4,D6
typical_cds_rare	Chr2	17006453	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B104,B86,B89,C75
typical_cds_rare	Chr2	17006461	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	C28
typical_cds_rare	Chr2	17006482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B78
lof_cds	Chr2	17006494	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	12	B124,B44,B49,B66,B71,C29,C45,C47,C54,C74,C81,D6
typical_cds_rare	Chr2	17006511	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B140
typical_cds_rare	Chr2	17006521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B120,B24,C41,C87
typical_cds_rare	Chr2	17006554	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B104,B131,B84,D7
typical_cds_rare	Chr2	17006558	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B104,B84,B86,B89,C75
typical_cds_rare	Chr2	17006567	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	A20,B51,C71
lof_cds	Chr2	17006597	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	17	B1,B109,B119,B21,B22,B29,B36,B4,B48,B7,B72,B74,B79,B81,C25,C42,C9
typical_cds_rare	Chr2	17006677	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B92
lof_cds	Chr2	17006697	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	9	A16,B134,B45,B9,B95,C26,C87,D5,D9
typical_cds_rare	Chr2	17006764	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	A3,B79,C46
typical_cds_rare	Chr2	17006766	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	C29,D2
lof_cds	Chr2	17006834	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	21	A3,B1,B12,B122,B124,B126,B130,B46,B52,B68,B71,B73,B79,B90,C20,C27,C86,D1,D2,D4,D5
typical_cds_rare	Chr2	17006840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B104
typical_cds_rare	Chr2	17006921	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B21,C29
typical_cds_rare	Chr2	17006923	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B21,C29
typical_cds_rare	Chr2	17006929	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	A23,A3,B124,B71
typical_cds_rare	Chr2	17006969	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B88
lof_cds	Chr2	17007011	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	52	A22,A9,B1,B102,B114,B115,B118,B12,B122,B124,B13,B130,B138,B2,B22,B46,B50,B52,B56,B68,B71,B73,B74,B75,B85,B9,B90,B92,B95,C11,C13,C20,C27,C28,C32,C50,C56,C64,C69,C73,C74,C75,C78,C80,C81,C82,C85,C86,D1,D2,D4,D5
lof_cds	Chr2	17007029	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	55	A22,A25,A6,A9,B1,B102,B113,B114,B118,B12,B122,B124,B13,B130,B46,B50,B52,B56,B62,B65,B68,B71,B73,B74,B79,B85,B9,B90,B92,B97,C11,C13,C20,C27,C28,C47,C56,C6,C64,C69,C7,C72,C73,C74,C75,C78,C80,C81,C82,C85,C86,D1,D2,D4,D5
lof_cds	Chr2	17007090	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B126,B28,B58,C33,C78
typical_cds_rare	Chr2	17007090	AGT	A	INDEL	2bp_deletion	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B126,B28,B58,C33,C78
typical_cds_rare	Chr2	17007094	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	A15,B54,C44,D11
lof_cds	Chr2	17007136	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	30	A14,A2,B105,B106,B115,B117,B13,B133,B138,B139,B2,B22,B23,B5,B61,B63,B67,B69,B82,B95,C32,C39,C44,C53,C61,C68,C71,C9,D1,D9
typical_cds_rare	Chr2	17007149	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B49,D9
lof_cds	Chr2	17007159	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	22	A13,A2,A22,A4,B100,B115,B124,B140,B23,B28,B68,B90,B95,B99,C18,C46,C53,C59,C60,C63,C67,C71
typical_cds_rare	Chr2	17007270	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B117,B22,C13,C32,C39
typical_cds_rare	Chr2	17007375	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B74
lof_cds	Chr2	17007384	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	6	B21,C14,C18,C29,C72,D2
typical_cds_rare	Chr2	17007391	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B120,B62,B67
typical_cds_rare	Chr2	17007394	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B110,B16,B6,C67
lof_cds	Chr2	17007403	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	34	A18,A2,A21,B115,B119,B128,B13,B133,B137,B139,B18,B2,B20,B22,B23,B37,B45,B5,B61,B63,B66,B67,B78,B88,B95,C32,C38,C39,C55,C63,C68,C9,D1,D8
typical_cds_rare	Chr2	17007407	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	A18,B110,B124,B16,C22
typical_cds_rare	Chr2	17007419	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	A15,B136,B44,B65,C21
typical_cds_rare	Chr2	17007507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B104,B120,B24,B99,C87
lof_cds	Chr2	17007516	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	10	A5,A6,B105,B26,B66,C10,C35,C4,C5,C76
typical_cds_rare	Chr2	17007530	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B124,B16,B6,B8,C67
typical_cds_rare	Chr2	17007544	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B11,C22
lof_cds	Chr2	17007560	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	34	A13,A15,A3,A8,B105,B123,B125,B130,B134,B138,B4,B41,B46,B49,B50,B62,B80,B89,B9,C16,C19,C23,C25,C28,C29,C36,C52,C54,C6,C74,C81,C82,C85,D6
lof_cds	Chr2	17007587	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	11	A20,B124,B3,B51,B69,B87,C24,C61,C71,C86,D9
typical_cds_rare	Chr2	17007717	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	5	B44,B91,C16,C58,C85
typical_cds_rare	Chr2	17007749	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B21,C72
lof_cds	Chr2	17007813	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B104
typical_cds_rare	Chr2	17007813	GC	G	INDEL	1bp_deletion	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B104
typical_cds_rare	Chr2	17007835	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B104
typical_cds_rare	Chr2	17008240	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	A15,B103
typical_cds_rare	Chr2	17008261	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B26
typical_cds_rare	Chr2	17008264	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B15,C15
typical_cds_rare	Chr2	17008268	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B122
typical_cds_rare	Chr2	17008272	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B107,C76
typical_cds_rare	Chr2	17008288	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B15,D10
typical_cds_rare	Chr2	17008295	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B122
typical_cds_rare	Chr2	17008299	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B26
typical_cds_rare	Chr2	17008302	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	2	B122,C85
typical_cds_rare	Chr2	17008304	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	4	B37,C5,D1,D9
typical_cds_rare	Chr2	17008311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	C56,C65,D10
typical_cds_rare	Chr2	17008319	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	A5
lof_cds	Chr2	17008326	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	C22
typical_cds_rare	Chr2	17008326	TG	T	INDEL	1bp_deletion	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	C22
typical_cds_rare	Chr2	17008332	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	3	B102,D3,D9
typical_cds_rare	Chr2	17008340	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	C76
typical_cds_rare	Chr2	17008361	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	1	B8
lof_cds	Chr2	17008395	C	CT	INDEL	1bp_insertion	stop_gained,frameshift_variant	LOC131011404	SmilChr02G000971	131011404	rna-XM_057939219.1	8	A15,B103,B127,B20,B54,B8,C44,D11