source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	24544836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B119,B17,C40,C87
typical_cds_rare	Chr2	24545227	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545233	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545248	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545277	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B103,C52,D1
typical_cds_rare	Chr2	24545290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B104
typical_cds_rare	Chr2	24545291	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B54
typical_cds_rare	Chr2	24545292	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545295	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,D1
typical_cds_rare	Chr2	24545298	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B54
lof_cds	Chr2	24545314	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	38	A18,A3,A7,B104,B11,B123,B125,B13,B133,B136,B140,B17,B29,B36,B47,B50,B51,B52,B57,B6,B87,B88,B94,B95,B97,C14,C17,C18,C3,C31,C39,C51,C65,C71,C77,C81,C84,C85
lof_cds	Chr2	24545317	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	38	A18,A3,A7,B104,B11,B123,B125,B13,B133,B136,B140,B17,B29,B36,B47,B50,B51,B52,B57,B6,B87,B88,B94,B95,B97,C14,C17,C18,C3,C31,C39,C51,C65,C71,C77,C81,C84,C85
typical_cds_rare	Chr2	24545323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B32
typical_cds_rare	Chr2	24545324	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B32
typical_cds_rare	Chr2	24545325	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B103
typical_cds_rare	Chr2	24545326	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B103,B54
typical_cds_rare	Chr2	24545396	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B42,B7
typical_cds_rare	Chr2	24545448	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A18,B19,B5,C58,C72
lof_cds	Chr2	24545456	T	TG	INDEL	1bp_insertion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	14	A3,A6,B16,B20,B4,B80,B86,B9,C1,C20,C24,C44,D2,D4
lof_cds	Chr2	24545485	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	19	A2,A5,B103,B114,B117,B4,B58,B64,B7,B76,B79,B87,C1,C12,C20,C24,C44,C5,C73
typical_cds_rare	Chr2	24545488	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B140,C61
typical_cds_rare	Chr2	24545504	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C72
typical_cds_rare	Chr2	24545539	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A13,A9,B111,B12,B71
typical_cds_rare	Chr2	24545544	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B123,B83
lof_cds	Chr2	24545545	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C61
typical_cds_rare	Chr2	24545545	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C61
typical_cds_rare	Chr2	24545550	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B42,B94,C61,D3
typical_cds_rare	Chr2	24545619	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A15,A4,B45,B92,C12
lof_cds	Chr2	24545640	GGC	G	INDEL	2bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B80,D5
typical_cds_rare	Chr2	24545640	GGC	G	INDEL	2bp_deletion	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B80,D5
lof_cds	Chr2	24545642	CG	C	INDEL	1bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	56	A15,A3,A4,A7,B104,B11,B123,B125,B13,B133,B135,B136,B140,B17,B18,B26,B29,B32,B36,B41,B45,B47,B50,B51,B52,B53,B57,B6,B84,B87,B88,B90,B92,B95,B97,C12,C14,C17,C18,C23,C3,C31,C39,C5,C51,C58,C65,C67,C71,C74,C77,C81,C84,C85,D11,D8
typical_cds_rare	Chr2	24545663	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B104
typical_cds_rare	Chr2	24545667	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B41
typical_cds_rare	Chr2	24545700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B13,C71
lof_cds	Chr2	24545707	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	C5,C8
typical_cds_rare	Chr2	24545707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	C5,C8
typical_cds_rare	Chr2	24545712	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	C5,C8
typical_cds_rare	Chr2	24545807	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B122,B46
typical_cds_rare	Chr2	24545829	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B33,B4,B46,B9
typical_cds_rare	Chr2	24545834	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B72,C49
typical_cds_rare	Chr2	24545856	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B53,C5,D8
typical_cds_rare	Chr2	24545872	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B80,C61
lof_cds	Chr2	24545878	GCA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	49	A18,A21,A23,A8,B100,B105,B110,B111,B112,B12,B120,B121,B122,B2,B22,B24,B25,B33,B38,B39,B4,B46,B56,B59,B61,B65,B66,B68,B72,B75,B79,B83,B9,B98,C14,C19,C21,C22,C30,C36,C44,C49,C53,C65,C69,C7,C77,C86,D4
typical_cds_rare	Chr2	24545920	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B26,B76,B93
typical_cds_rare	Chr2	24545924	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B26,B76,B93
typical_cds_rare	Chr2	24545941	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B135
typical_cds_rare	Chr2	24545943	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	D4
typical_cds_rare	Chr2	24545959	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B26,C69
typical_cds_rare	Chr2	24545977	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	A6
lof_cds	Chr2	24545988	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B135
typical_cds_rare	Chr2	24545988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B135
typical_cds_rare	Chr2	24546003	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B100,B129,B77,B91,D11
typical_cds_rare	Chr2	24546016	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B26,C72
lof_cds	Chr2	24546037	GC	G	INDEL	1bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	31	A18,A3,B11,B123,B133,B136,B140,B17,B29,B36,B47,B51,B52,B57,B6,B87,B88,B94,B95,B97,C14,C18,C23,C3,C39,C51,C65,C67,C77,C84,C85
typical_cds_rare	Chr2	24546042	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B26
typical_cds_rare	Chr2	24546048	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B26
typical_cds_rare	Chr2	24546052	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	A18,B5,C58,C72
typical_cds_rare	Chr2	24546069	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B72,C10,C34,C49
typical_cds_rare	Chr2	24546078	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B33,C15,C60
typical_cds_rare	Chr2	24546080	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B101,B2,B20,C12
typical_cds_rare	Chr2	24546091	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B105,B118,B40,C17
typical_cds_rare	Chr2	24546094	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B105
typical_cds_rare	Chr2	24546110	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B105,B118,B12,B40,B46
typical_cds_rare	Chr2	24546119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B35,B80,C61
typical_cds_rare	Chr2	24546137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B33,C15,C60
typical_cds_rare	Chr2	24546182	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B126,B80,C60
typical_cds_rare	Chr2	24546219	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A1,B40,C41,C77,D6
lof_cds	Chr2	24546231	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A1,C41,C60,C77,D6
typical_cds_rare	Chr2	24546231	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A1,C41,C60,C77,D6
lof_cds	Chr2	24546280	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	8	B126,B13,B138,B15,C13,C30,C54,C76
typical_cds_rare	Chr2	24546338	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C47
typical_cds_rare	Chr2	24546342	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C47
typical_cds_rare	Chr2	24546365	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C51
typical_cds_rare	Chr2	24546368	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C51
typical_cds_rare	Chr2	24546371	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C51
typical_cds_rare	Chr2	24546375	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C47
typical_cds_rare	Chr2	24546383	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C51
lof_cds	Chr2	24546387	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C47
typical_cds_rare	Chr2	24546387	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B108,C22,C47
typical_cds_rare	Chr2	24546411	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	C47
typical_cds_rare	Chr2	24546419	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A15,A4,B45,B90,B92
typical_cds_rare	Chr2	24546447	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B41
typical_cds_rare	Chr2	24546483	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	A11,B78
lof_cds	Chr2	24546507	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B126
typical_cds_rare	Chr2	24546507	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B126
lof_cds	Chr2	24546528	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B100,B129,B77,B91,D11
typical_cds_rare	Chr2	24546528	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B100,B129,B77,B91,D11
typical_cds_rare	Chr2	24546541	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B126
typical_cds_rare	Chr2	24546551	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	A18,B122
typical_cds_rare	Chr2	24546592	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B24,B67
typical_cds_rare	Chr2	24546598	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B6,C56
typical_cds_rare	Chr2	24546611	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	A21,B118,B69,B7
typical_cds_rare	Chr2	24546618	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	B53,C5,D8
lof_cds	Chr2	24546639	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B16,B28,B6,C22,C56
typical_cds_rare	Chr2	24546639	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	B16,B28,B6,C22,C56
typical_cds_rare	Chr2	24546652	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	3	A5,B114,B126
typical_cds_rare	Chr2	24546664	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B104
typical_cds_rare	Chr2	24546674	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	4	B28,C5,C56,D10
typical_cds_rare	Chr2	24546685	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	5	A21,B118,B30,B49,C68
typical_cds_rare	Chr2	24546688	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	1	B67
lof_cds	Chr2	24546693	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	28	A2,A7,B104,B107,B113,B115,B2,B31,B34,B37,B62,B72,B75,B79,B87,B90,C20,C21,C24,C3,C43,C44,C62,C64,C66,C77,C86,D4
typical_cds_rare	Chr2	24546707	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008173	SmilChr02G001320	131008173	rna-XM_057935067.1	2	B114,B126