source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	27763391	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B55
typical_cds_rare	Chr2	27763427	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	A23,B122
typical_cds_rare	Chr2	27763428	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	C11,C69
lof_cds	Chr2	27763443	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B115,C45
typical_cds_rare	Chr2	27763443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B115,C45
typical_cds_rare	Chr2	27763463	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B115,C45
lof_cds	Chr2	27763478	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	B17,B31,B59,C69
typical_cds_rare	Chr2	27763478	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	B17,B31,B59,C69
typical_cds_rare	Chr2	27763481	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	A24,B1,B5
typical_cds_rare	Chr2	27763482	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27763505	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27763604	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B120
typical_cds_rare	Chr2	27763630	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	B1,B120,B62,B68,C48
lof_cds	Chr2	27763634	GAC	G	INDEL	2bp_deletion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	C24,D7
typical_cds_rare	Chr2	27763634	GAC	G	INDEL	2bp_deletion	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	C24,D7
typical_cds_rare	Chr2	27763641	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	A21,B27
typical_cds_rare	Chr2	27763750	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B115,C45
typical_cds_rare	Chr2	27763784	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B122,B35,C69
typical_cds_rare	Chr2	27763799	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C42
typical_cds_rare	Chr2	27763803	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	A21
typical_cds_rare	Chr2	27763805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B55
typical_cds_rare	Chr2	27763925	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	A3,B69,C41,D2
typical_cds_rare	Chr2	27763930	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B55
typical_cds_rare	Chr2	27763956	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	A3,B59,B69,C41,D2
typical_cds_rare	Chr2	27764068	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B55,C20
typical_cds_rare	Chr2	27764084	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	B47,B55,B59,B69,C20
typical_cds_rare	Chr2	27764195	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B27,B55
typical_cds_rare	Chr2	27764229	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B137,B34,C5
typical_cds_rare	Chr2	27764263	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C74
typical_cds_rare	Chr2	27764293	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B127,B138
typical_cds_rare	Chr2	27764323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B120,B139,C18
lof_cds	Chr2	27764346	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C26
typical_cds_rare	Chr2	27764346	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C26
typical_cds_rare	Chr2	27764360	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B87
typical_cds_rare	Chr2	27764404	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	B55,C20
lof_cds	Chr2	27764426	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	198	A11,A14,A15,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,B1,B10,B101,B102,B103,B105,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B118,B119,B12,B122,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B136,B137,B138,B140,B15,B17,B18,B19,B22,B23,B24,B25,B26,B27,B28,B29,B30,B31,B32,B33,B34,B35,B36,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B5,B50,B52,B54,B57,B58,B6,B60,B61,B62,B63,B65,B67,B68,B7,B70,B72,B73,B74,B76,B77,B78,B79,B80,B81,B82,B83,B84,B85,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B97,B99,C1,C10,C11,C13,C14,C15,C16,C17,C18,C2,C21,C22,C23,C24,C25,C26,C28,C3,C30,C31,C32,C35,C36,C37,C40,C41,C42,C43,C44,C45,C47,C48,C49,C5,C50,C51,C52,C53,C58,C59,C6,C60,C61,C63,C64,C65,C67,C68,C69,C71,C72,C73,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C87,C9,D10,D2,D5,D6,D7,D9
lof_cds	Chr2	27764431	CA	C	INDEL	1bp_deletion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	195	A11,A14,A15,A18,A19,A2,A20,A21,A22,A23,A24,A25,A3,A4,A5,A6,A7,A8,B1,B10,B101,B102,B103,B105,B106,B107,B108,B109,B11,B110,B112,B113,B114,B115,B117,B118,B12,B122,B124,B125,B126,B127,B128,B129,B13,B130,B131,B132,B133,B134,B135,B137,B138,B140,B15,B17,B18,B19,B22,B23,B24,B25,B26,B27,B28,B29,B30,B31,B32,B33,B34,B35,B37,B38,B39,B4,B40,B41,B42,B43,B44,B45,B5,B50,B52,B54,B55,B57,B58,B6,B60,B61,B62,B63,B65,B67,B68,B7,B70,B72,B73,B74,B76,B77,B78,B79,B80,B81,B82,B83,B84,B85,B86,B88,B89,B9,B90,B91,B92,B93,B94,B95,B97,B99,C1,C10,C11,C13,C14,C15,C16,C17,C18,C2,C20,C21,C22,C23,C24,C25,C26,C28,C3,C30,C31,C32,C35,C36,C37,C40,C41,C42,C43,C44,C45,C47,C48,C49,C5,C50,C51,C52,C53,C58,C59,C6,C60,C61,C63,C65,C67,C68,C69,C71,C73,C75,C76,C77,C78,C79,C8,C80,C82,C83,C84,C85,C86,C87,C9,D10,D2,D5,D6,D7,D9
typical_cds_rare	Chr2	27764456	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B27,B55,C44
lof_cds	Chr2	27764458	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	12	B100,B107,B110,B120,B45,B51,B60,B63,C17,C29,C52,D6
lof_cds	Chr2	27764544	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	14	A4,B108,B110,B13,B29,B56,B67,B7,B95,B96,B97,C23,C56,C65
typical_cds_rare	Chr2	27764555	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	B2,B49,B71,B87,C13
typical_cds_rare	Chr2	27764574	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B136,C80,C84
lof_cds	Chr2	27764587	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	15	A2,B11,B119,B133,B17,B26,B57,B77,B88,C40,C5,C51,C71,C77,C87
lof_cds	Chr2	27764601	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B14
typical_cds_rare	Chr2	27764601	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B14
typical_cds_rare	Chr2	27764645	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B24
typical_cds_rare	Chr2	27764666	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	B32,C20,C3,C85
typical_cds_rare	Chr2	27764669	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B122
typical_cds_rare	Chr2	27764684	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	A20,D7
lof_cds	Chr2	27764712	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	7	B108,B138,B15,B33,B90,B92,C61
typical_cds_rare	Chr2	27764747	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27764760	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27764817	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B82
typical_cds_rare	Chr2	27764827	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B27,B55,D11
typical_cds_rare	Chr2	27764946	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	A23,B138,B15,C82
typical_cds_rare	Chr2	27764947	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	A3,B137,B59,C41,D2
typical_cds_rare	Chr2	27764968	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	D10
typical_cds_rare	Chr2	27764973	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	A20,C19,C54
lof_cds	Chr2	27764989	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	8	A23,B138,B15,B89,C13,C16,C3,D5
lof_cds	Chr2	27764994	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	43	B102,B105,B108,B127,B137,B16,B2,B24,B25,B31,B33,B37,B40,B41,B42,B43,B50,B52,B60,B67,B70,B80,B88,B90,B92,B95,B97,C15,C18,C2,C23,C46,C48,C50,C53,C59,C61,C68,C75,C79,C9,D6,D9
typical_cds_rare	Chr2	27765018	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27765073	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	A20,C78,D7
typical_cds_rare	Chr2	27765139	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C84
typical_cds_rare	Chr2	27765167	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	D10
typical_cds_rare	Chr2	27765176	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B17,C40,C87
typical_cds_rare	Chr2	27765212	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	2	A20,D7
lof_cds	Chr2	27765230	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B47,B88,C23
typical_cds_rare	Chr2	27765230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B47,B88,C23
typical_cds_rare	Chr2	27765313	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	5	A3,B59,B69,C41,D2
typical_cds_rare	Chr2	27765323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B27
typical_cds_rare	Chr2	27765325	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	3	B124,B22,C25
lof_cds	Chr2	27765394	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B35
typical_cds_rare	Chr2	27765394	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	B35
typical_cds_rare	Chr2	27765457	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	1	C44
typical_cds_rare	Chr2	27765533	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008220	SmilChr02G001482	131008220	rna-XM_057935113.1	4	B115,B93,C2,C45