source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	34345531	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	7	B105,B107,B120,B68,B91,C13,C33
typical_cds_rare	Chr2	34345536	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B103,B72,C32,C68,D7
typical_cds_rare	Chr2	34345549	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B139,C4
typical_cds_rare	Chr2	34345587	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34345612	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	A13,C4,D10
typical_cds_rare	Chr2	34345629	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C87
typical_cds_rare	Chr2	34345657	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D10
lof_cds	Chr2	34345665	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D11
typical_cds_rare	Chr2	34345665	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D11
typical_cds_rare	Chr2	34345685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	A3,C34
lof_cds	Chr2	34345691	C	CTT	INDEL	2bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B140,B56,B96
typical_cds_rare	Chr2	34345691	C	CTT	INDEL	2bp_insertion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B140,B56,B96
lof_cds	Chr2	34345694	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B140,B56,B96
typical_cds_rare	Chr2	34345694	GAA	G	INDEL	2bp_deletion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B140,B56,B96
lof_cds	Chr2	34345798	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	10	A5,B106,B121,B129,B3,B65,C17,C36,C4,C60
typical_cds_rare	Chr2	34345823	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	A11,B87,B89
typical_cds_rare	Chr2	34345836	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B103,B72,C32,C68,D7
typical_cds_rare	Chr2	34345851	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B33
lof_cds	Chr2	34345870	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	21	A1,B127,B139,B140,B23,B37,B59,B64,B68,B71,C16,C18,C21,C22,C27,C29,C48,C56,C61,C68,C86
lof_cds	Chr2	34345871	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	104	A10,A11,A13,A16,A19,A24,A25,A4,A7,B10,B100,B102,B106,B107,B111,B112,B113,B114,B118,B12,B120,B121,B123,B126,B128,B131,B132,B134,B138,B16,B18,B19,B20,B23,B28,B29,B3,B30,B31,B33,B4,B45,B47,B51,B54,B55,B56,B57,B60,B62,B65,B70,B72,B76,B78,B8,B80,B81,B82,B85,B86,B87,B89,B90,B92,B93,B96,B99,C1,C15,C19,C2,C20,C23,C24,C27,C30,C32,C35,C39,C4,C41,C45,C47,C49,C51,C54,C6,C63,C64,C66,C71,C72,C73,C75,C76,C78,C82,C87,C9,D11,D2,D6,D7
lof_cds	Chr2	34345880	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B87,B89
typical_cds_rare	Chr2	34345880	T	TC	INDEL	1bp_insertion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B87,B89
typical_cds_rare	Chr2	34345963	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	A13,C4
typical_cds_rare	Chr2	34345987	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B45
typical_cds_rare	Chr2	34346100	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34346115	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B74
typical_cds_rare	Chr2	34346119	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B111
typical_cds_rare	Chr2	34346196	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B104
lof_cds	Chr2	34346209	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	A13,C4
typical_cds_rare	Chr2	34346209	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	A13,C4
typical_cds_rare	Chr2	34346216	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	A5,B106,B60,B8,C58
typical_cds_rare	Chr2	34346231	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B107,B29,C20
typical_cds_rare	Chr2	34346238	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C20,C59
typical_cds_rare	Chr2	34346265	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C4
typical_cds_rare	Chr2	34346290	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	C64,C66,C78
typical_cds_rare	Chr2	34346303	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	A8,B133
typical_cds_rare	Chr2	34346374	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34346380	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B78,C28,C82,D11
typical_cds_rare	Chr2	34346384	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B91
typical_cds_rare	Chr2	34346385	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B106,B129,B3,B65,B8
typical_cds_rare	Chr2	34346391	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B38,C31,C33
typical_cds_rare	Chr2	34346405	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C82,D2
typical_cds_rare	Chr2	34346412	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B69,C44,C55,C83
typical_cds_rare	Chr2	34346413	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C79
typical_cds_rare	Chr2	34346426	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B38,C63
lof_cds	Chr2	34346455	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	66	A11,A13,A18,A19,A21,A22,A3,A7,B10,B100,B101,B103,B106,B107,B109,B113,B118,B12,B120,B122,B123,B136,B139,B20,B27,B3,B36,B38,B4,B47,B48,B49,B50,B52,B54,B59,B6,B64,B67,B68,B72,B78,B79,B8,B85,B98,C10,C12,C13,C20,C33,C36,C37,C38,C4,C40,C41,C47,C55,C69,C7,C70,C79,D1,D5,D6
typical_cds_rare	Chr2	34346498	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B38,C63
typical_cds_rare	Chr2	34346547	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C75
typical_cds_rare	Chr2	34346564	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B121,C4,C60
typical_cds_rare	Chr2	34346571	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C66
typical_cds_rare	Chr2	34346576	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B112,B40,C33
typical_cds_rare	Chr2	34346579	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B13,B67,B95
lof_cds	Chr2	34346608	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	82	A1,A14,A16,A19,A20,A23,A24,A4,A7,A8,A9,B103,B106,B111,B117,B119,B125,B129,B131,B135,B139,B14,B140,B16,B18,B19,B2,B23,B24,B25,B26,B28,B29,B31,B51,B52,B57,B58,B60,B61,B62,B64,B71,B74,B75,B79,B83,B9,B97,B99,C1,C11,C13,C18,C19,C22,C3,C30,C34,C45,C46,C51,C53,C54,C59,C62,C65,C69,C70,C71,C75,C76,C77,C78,C83,C85,C86,D1,D11,D6,D7,D9
typical_cds_rare	Chr2	34346610	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B102,B50,B67,B95
lof_cds	Chr2	34346659	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	7	A13,B112,B132,B139,B5,C4,C59
typical_cds_rare	Chr2	34346707	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C64
typical_cds_rare	Chr2	34346714	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B33
typical_cds_rare	Chr2	34346820	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	A13,B132,C4
lof_cds	Chr2	34346832	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B101,B13,B61
typical_cds_rare	Chr2	34346832	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B101,B13,B61
typical_cds_rare	Chr2	34346836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C48
typical_cds_rare	Chr2	34346840	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B106,B132
typical_cds_rare	Chr2	34346841	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B82,B99,C4,C78
typical_cds_rare	Chr2	34346842	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B100,B17,C45
typical_cds_rare	Chr2	34346845	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C48
typical_cds_rare	Chr2	34346852	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B82,B99,C4,C78
typical_cds_rare	Chr2	34346890	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B87
typical_cds_rare	Chr2	34346897	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B87
typical_cds_rare	Chr2	34346939	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D11
lof_cds	Chr2	34346988	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B134,B67,B77,C14,C22
typical_cds_rare	Chr2	34346988	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B134,B67,B77,C14,C22
typical_cds_rare	Chr2	34346998	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B132
typical_cds_rare	Chr2	34347004	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B91
typical_cds_rare	Chr2	34347012	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C4
lof_cds	Chr2	34347013	CAG	C	INDEL	2bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	A3
typical_cds_rare	Chr2	34347013	CAG	C	INDEL	2bp_deletion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	A3
typical_cds_rare	Chr2	34347133	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B105,B120,B68,C13,C33
typical_cds_rare	Chr2	34347145	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	D10,D11
typical_cds_rare	Chr2	34347160	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	3	B132,B139,C4
lof_cds	Chr2	34347179	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	8	B111,B115,B20,B47,B55,B57,B81,C9
typical_cds_rare	Chr2	34347208	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C53,C66
typical_cds_rare	Chr2	34347214	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C66
lof_cds	Chr2	34347218	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B75,C14
typical_cds_rare	Chr2	34347218	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B75,C14
typical_cds_rare	Chr2	34347221	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	5	B106,B130,B133,C23,C35
typical_cds_rare	Chr2	34347269	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B37,B59,B75,B93
typical_cds_rare	Chr2	34347271	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C66
typical_cds_rare	Chr2	34347311	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	A13,B132,B139,C4
typical_cds_rare	Chr2	34347323	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B114,B72
lof_cds	Chr2	34347342	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B122,C56
typical_cds_rare	Chr2	34347342	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	B122,C56
lof_cds	Chr2	34347343	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	74	A11,A13,A14,A16,A22,A23,A25,A3,A6,A7,A9,B100,B11,B111,B112,B114,B120,B126,B129,B132,B134,B137,B15,B17,B2,B20,B22,B28,B33,B36,B40,B41,B44,B45,B47,B48,B51,B52,B53,B55,B57,B62,B70,B77,B80,B81,B84,B85,B92,C13,C14,C24,C25,C27,C3,C31,C33,C38,C41,C53,C54,C59,C63,C66,C7,C70,C72,C73,C78,C80,C84,C85,C87,D3
typical_cds_rare	Chr2	34347348	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	4	B134,B65,B77,C14
lof_cds	Chr2	34347380	G	GA	INDEL	1bp_insertion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	9	A2,A24,B128,B65,B70,C4,C64,C66,C78
typical_cds_rare	Chr2	34347394	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34347397	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	C4
typical_cds_rare	Chr2	34347413	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34347415	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	2	C64,C66
typical_cds_rare	Chr2	34347424	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B91
typical_cds_rare	Chr2	34347458	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	B91
lof_cds	Chr2	34347475	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	72	A1,A11,A14,A21,A5,A7,A9,B100,B105,B107,B113,B115,B125,B129,B137,B140,B15,B20,B22,B28,B30,B33,B34,B41,B45,B48,B5,B51,B53,B55,B56,B65,B66,B7,B71,B74,B78,B79,B88,B90,B94,B97,C11,C13,C15,C2,C20,C21,C25,C28,C34,C35,C36,C38,C41,C47,C50,C54,C56,C62,C63,C66,C68,C76,C8,C82,C9,D1,D10,D2,D7,D9
lof_cds	Chr2	34347492	AC	A	INDEL	1bp_deletion	frameshift_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D10
typical_cds_rare	Chr2	34347492	AC	A	INDEL	1bp_deletion	CDS_variant	LOC131008351	SmilChr02G001905	131008351	rna-XM_057935235.1	1	D10