source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
typical_cds_rare	Chr2	39161801	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B26,C69
typical_cds_rare	Chr2	39161805	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B14,C38,C53,C66,C82
lof_cds	Chr2	39161808	T	TTA	INDEL	2bp_insertion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	32	A20,A4,B10,B102,B105,B109,B12,B125,B18,B4,B41,B45,B48,B5,B55,B72,B77,B81,B98,B99,C11,C22,C27,C41,C55,C60,C61,C64,C76,C8,C86,D1
typical_cds_rare	Chr2	39161833	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B71,C84
typical_cds_rare	Chr2	39161836	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B61
typical_cds_rare	Chr2	39161837	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B71,C84
typical_cds_rare	Chr2	39161840	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B113,B30,B55
typical_cds_rare	Chr2	39161850	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	B134,B22,B96,D10
typical_cds_rare	Chr2	39161860	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B111,C68,C79
lof_cds	Chr2	39161875	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	6	A13,A3,B106,B31,C17,C20
typical_cds_rare	Chr2	39161885	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B25,C67
lof_cds	Chr2	39161908	CTA	C	INDEL	2bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	27	A18,A21,A24,A9,B1,B107,B120,B135,B20,B22,B28,B3,B33,B37,B41,B62,B75,B83,B94,C19,C25,C42,C5,C62,C77,C79,D11
lof_cds	Chr2	39161914	G	GAA	INDEL	2bp_insertion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	27	A18,A21,A24,A9,B1,B107,B120,B135,B20,B22,B28,B3,B33,B37,B41,B62,B75,B83,B94,C19,C25,C42,C5,C62,C77,C79,D11
typical_cds_rare	Chr2	39161915	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	C28
lof_cds	Chr2	39161916	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	6	B60,B80,C20,C21,C50,C9
typical_cds_rare	Chr2	39161932	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B102,B97,C82
typical_cds_rare	Chr2	39161945	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B52,B75,C29,C38,C7
lof_cds	Chr2	39161946	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	128	A1,A11,A15,A16,A19,A22,A23,A24,A3,A6,A7,B100,B104,B105,B106,B107,B108,B109,B11,B110,B112,B114,B12,B122,B123,B127,B129,B132,B134,B135,B137,B138,B139,B15,B16,B17,B18,B19,B20,B21,B24,B25,B26,B27,B28,B29,B30,B31,B33,B34,B4,B40,B48,B5,B50,B52,B55,B56,B57,B6,B60,B64,B65,B68,B7,B70,B71,B72,B73,B74,B78,B8,B80,B86,B87,B91,B93,B97,B98,C12,C15,C16,C17,C19,C20,C22,C23,C24,C28,C29,C3,C31,C33,C34,C35,C36,C4,C40,C42,C43,C44,C45,C47,C48,C49,C50,C53,C54,C58,C6,C60,C62,C64,C66,C7,C71,C73,C75,C78,C79,C80,C81,C82,C85,D11,D3,D5,D7
lof_cds	Chr2	39161985	T	TC	INDEL	1bp_insertion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	8	A8,B123,B47,B57,B78,C33,C72,D4
typical_cds_rare	Chr2	39162001	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B104
typical_cds_rare	Chr2	39162014	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	C29,C75
typical_cds_rare	Chr2	39162046	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	C60
lof_cds	Chr2	39162049	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	74	A10,A2,A20,A4,A8,A9,B1,B10,B102,B104,B108,B111,B112,B113,B119,B12,B120,B123,B124,B133,B140,B18,B25,B28,B29,B30,B35,B4,B41,B42,B43,B46,B47,B55,B57,B6,B68,B70,B72,B73,B78,B82,B85,B90,B91,B92,B95,B98,C10,C14,C22,C23,C25,C32,C33,C37,C39,C4,C46,C47,C48,C51,C56,C62,C65,C67,C68,C70,C72,C74,C79,C86,D4,D8
typical_cds_rare	Chr2	39162060	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B104
typical_cds_rare	Chr2	39162075	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B127,C29,C38,C7,D2
typical_cds_rare	Chr2	39162078	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B55
lof_cds	Chr2	39162094	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	7	A16,B129,B136,B45,B55,C15,C48
typical_cds_rare	Chr2	39162102	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	A22,B110,C73,D6
typical_cds_rare	Chr2	39162109	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B26
typical_cds_rare	Chr2	39162128	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	A11,B44
typical_cds_rare	Chr2	39162130	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B59
typical_cds_rare	Chr2	39162137	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B55
typical_cds_rare	Chr2	39162146	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	A11,B122,C49,C67
typical_cds_rare	Chr2	39162195	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A18,B114,B14,B67,D11
lof_cds	Chr2	39162223	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	30	A15,A2,A5,B104,B125,B140,B16,B3,B34,B43,B55,B61,B67,B69,B77,B78,B8,B80,B94,C2,C23,C46,C50,C53,C60,C62,C63,C74,C8,C81
typical_cds_rare	Chr2	39162230	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B104,B67,C8
typical_cds_rare	Chr2	39162232	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	C2,C21,C35
typical_cds_rare	Chr2	39162234	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A18,B14,B55,C37,C43
typical_cds_rare	Chr2	39162235	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	B104,B129,B55,C1
typical_cds_rare	Chr2	39162241	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B55,C1
lof_cds	Chr2	39162256	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B104,B55,C1
typical_cds_rare	Chr2	39162256	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B104,B55,C1
typical_cds_rare	Chr2	39162275	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	D11
typical_cds_rare	Chr2	39162288	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B104,B2,C21
typical_cds_rare	Chr2	39162301	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B55
typical_cds_rare	Chr2	39162307	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B123,D4
lof_cds	Chr2	39162322	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	19	A1,A15,A2,B11,B113,B119,B133,B20,B30,B43,B5,B92,C15,C30,C49,C65,C75,C81,D1
typical_cds_rare	Chr2	39162330	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	A14,A9,D1
typical_cds_rare	Chr2	39162333	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	B53,C1,C43,C59
lof_cds	Chr2	39162334	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A7,B103,B13,B2,B73
typical_cds_rare	Chr2	39162334	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A7,B103,B13,B2,B73
typical_cds_rare	Chr2	39162343	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B47,C33,C53
typical_cds_rare	Chr2	39162393	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B102
typical_cds_rare	Chr2	39162403	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B127
typical_cds_rare	Chr2	39162410	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	B69,B80,B93,C33
typical_cds_rare	Chr2	39162419	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B55,C1
typical_cds_rare	Chr2	39162434	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B53,B55
typical_cds_rare	Chr2	39162459	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B102
lof_cds	Chr2	39162463	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	6	B119,B122,B66,C13,C50,D1
typical_cds_rare	Chr2	39162484	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B31,B47,B7,B75,B83
typical_cds_rare	Chr2	39162487	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B102,B53,B94,B97,C82
typical_cds_rare	Chr2	39162504	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	C21
lof_cds	Chr2	39162519	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B121,B80
typical_cds_rare	Chr2	39162519	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B121,B80
lof_cds	Chr2	39162528	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	31	B105,B109,B11,B112,B120,B122,B127,B20,B21,B28,B29,B44,B55,B58,B60,B64,B71,B94,C27,C28,C30,C39,C45,C49,C53,C58,C60,C62,C71,C81,D6
lof_cds	Chr2	39162530	TGC	T	INDEL	2bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	29	B105,B109,B11,B112,B122,B127,B20,B21,B28,B44,B55,B58,B60,B64,B71,B94,C27,C28,C30,C39,C45,C49,C53,C58,C60,C62,C71,C81,D6
typical_cds_rare	Chr2	39162534	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	D11
typical_cds_rare	Chr2	39162562	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B31,C60
typical_cds_rare	Chr2	39162572	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	C18
typical_cds_rare	Chr2	39162574	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A5,B13,B47,C18,C2
typical_cds_rare	Chr2	39162605	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	C18
typical_cds_rare	Chr2	39162621	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B55,C1
typical_cds_rare	Chr2	39162625	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B55,C1
typical_cds_rare	Chr2	39162628	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	A18,B105,B127,B60,C17
typical_cds_rare	Chr2	39162634	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	C42,D6
typical_cds_rare	Chr2	39162646	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B104,B26,C82
lof_cds	Chr2	39162652	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	37	A9,B1,B102,B113,B124,B133,B140,B18,B25,B41,B42,B43,B55,B6,B61,B68,B72,B73,B90,B92,B95,B98,C10,C14,C25,C27,C37,C4,C47,C48,C51,C56,C65,C67,C74,C86,D1
typical_cds_rare	Chr2	39162654	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	A1,B17,C42,D8
typical_cds_rare	Chr2	39162661	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	3	B107,B27,C28
lof_cds	Chr2	39162663	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B64
typical_cds_rare	Chr2	39162663	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B64
typical_cds_rare	Chr2	39162667	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	1	B127
lof_cds	Chr2	39162670	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	65	A10,A2,A8,A9,B1,B102,B108,B111,B113,B120,B121,B123,B124,B133,B140,B15,B18,B19,B25,B28,B29,B30,B35,B41,B42,B43,B46,B55,B6,B61,B68,B72,B73,B78,B90,B91,B92,B95,C10,C11,C14,C23,C25,C27,C32,C33,C35,C37,C39,C4,C46,C47,C48,C51,C56,C60,C63,C65,C67,C69,C72,C74,C79,D1,D4
typical_cds_rare	Chr2	39162682	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	B125,B59,C15,C48
typical_cds_rare	Chr2	39162685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	5	B125,B50,B59,C15,C48
lof_cds	Chr2	39162697	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	A24,B31,B50,C86
typical_cds_rare	Chr2	39162697	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	4	A24,B31,B50,C86
typical_cds_rare	Chr2	39162700	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	B107,C28
typical_cds_rare	Chr2	39162741	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008427	SmilChr02G002195	131008427	rna-XM_057935308.1	2	C15,C76