source	chrom	pos	ref	alt	variant_type	ems_class	effect	gene_id	standard_gene_id	ncbi_geneid	transcripts	carrier_n	carriers
lof_cds	Chr2	39330221	T	TCA	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	53	A24,A5,A6,B1,B100,B108,B110,B111,B122,B125,B130,B137,B15,B17,B18,B21,B24,B3,B40,B43,B45,B48,B52,B53,B59,B62,B63,B64,B72,B73,B79,B82,B85,B95,B97,C18,C24,C25,C27,C29,C40,C53,C54,C57,C59,C60,C62,C64,C66,C7,C78,C84,D9
lof_cds	Chr2	39330226	TAA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	63	A24,A5,A6,B1,B100,B108,B110,B111,B118,B119,B122,B125,B134,B137,B15,B17,B18,B21,B24,B25,B3,B40,B43,B45,B48,B52,B53,B57,B59,B61,B62,B63,B65,B72,B73,B79,B81,B82,B85,B95,B97,C18,C21,C24,C25,C27,C28,C29,C38,C39,C40,C53,C54,C57,C59,C60,C62,C64,C66,C7,C78,C84,D9
lof_cds	Chr2	39330232	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	25	B1,B12,B123,B136,B138,B15,B30,B36,B47,B48,B49,B51,B56,B60,B64,B79,B90,B92,B96,C33,C37,C54,C65,C73,D4
lof_cds	Chr2	39330240	T	TAA	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	6	B137,B18,B40,C54,C60,C62
lof_cds	Chr2	39330394	AT	A	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	10	A4,B111,B42,B43,C10,C56,C65,D10,D3,D9
typical_cds_rare	Chr2	39330406	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B100,B72,B78
lof_cds	Chr2	39330418	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
typical_cds_rare	Chr2	39330418	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
typical_cds_rare	Chr2	39330443	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	B52,C49
typical_cds_rare	Chr2	39330455	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B100,B72,B78
typical_cds_rare	Chr2	39330506	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B19,B61,B70,B81,C49
typical_cds_rare	Chr2	39330519	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B1,B15,B56,B64,B96
typical_cds_rare	Chr2	39330521	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B61,B70,C49
typical_cds_rare	Chr2	39330524	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B61,B70,C49
typical_cds_rare	Chr2	39330536	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B61,B70,C49
typical_cds_rare	Chr2	39330552	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
typical_cds_rare	Chr2	39330560	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	A2,B19
lof_cds	Chr2	39330567	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	6	B21,B42,B43,B76,B95,C50
typical_cds_rare	Chr2	39330585	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B46
lof_cds	Chr2	39330591	CT	C	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	8	B119,B28,B37,B52,B61,B70,B81,C49
lof_cds	Chr2	39330594	GAA	G	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	8	B119,B28,B37,B52,B61,B70,B81,C49
lof_cds	Chr2	39330610	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	C58
typical_cds_rare	Chr2	39330610	C	CA	INDEL	1bp_insertion	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	C58
typical_cds_rare	Chr2	39330635	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B131
lof_cds	Chr2	39330660	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
typical_cds_rare	Chr2	39330660	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
typical_cds_rare	Chr2	39330683	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B100
typical_cds_rare	Chr2	39330685	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A13,B108,C12,C23,C57
lof_cds	Chr2	39330718	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	26	B1,B12,B123,B136,B138,B15,B30,B36,B47,B48,B49,B51,B56,B60,B64,B79,B90,B92,B96,C21,C33,C37,C54,C65,C73,D4
lof_cds	Chr2	39330742	C	CGA	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	13	B102,B119,B19,B2,B28,B37,B52,B61,B70,B81,C49,C50,C53
lof_cds	Chr2	39330748	CAA	C	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	12	B102,B119,B19,B2,B28,B52,B61,B70,B81,C49,C50,C53
lof_cds	Chr2	39330818	AGT	A	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	10	B119,B19,B28,B37,B52,B61,B70,C49,C50,C53
lof_cds	Chr2	39330821	C	CAT	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	10	B119,B19,B28,B37,B52,B61,B70,C49,C50,C53
typical_cds_rare	Chr2	39330827	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B83
lof_cds	Chr2	39330903	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	7	B119,B28,B37,B52,B70,C50,C53
lof_cds	Chr2	39330905	GGT	G	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	7	B119,B28,B37,B52,B70,C50,C53
lof_cds	Chr2	39330911	C	CT	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	7	B119,B28,B37,B52,B70,C50,C53
typical_cds_rare	Chr2	39330947	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	4	B1,B113,B122,C35
typical_cds_rare	Chr2	39330989	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B28,B52,B70,C50,C53
lof_cds	Chr2	39330999	C	T	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	37	A11,A18,B10,B102,B105,B11,B119,B120,B123,B133,B134,B2,B25,B27,B34,B4,B57,B65,B70,B75,B77,B78,B81,B88,C21,C3,C35,C36,C38,C39,C63,C77,C82,C85,C9,D3,D8
typical_cds_rare	Chr2	39331025	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	B136,B87
typical_cds_rare	Chr2	39331068	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B87
typical_cds_rare	Chr2	39331107	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	4	B108,C12,C23,C57
typical_cds_rare	Chr2	39331121	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	B8
typical_cds_rare	Chr2	39331153	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	C26,C77
typical_cds_rare	Chr2	39331156	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B100,B72,B78
typical_cds_rare	Chr2	39331209	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	4	A24,B31,B50,C86
lof_cds	Chr2	39331218	ATG	A	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	7	B124,B132,B2,B52,B74,C49,C50
lof_cds	Chr2	39331237	TCA	T	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	8	B124,B132,B2,B52,B7,B74,C49,C50
typical_cds_rare	Chr2	39331250	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B127,B29,C19,C32,D1
lof_cds	Chr2	39331257	TC	T	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B107,B118,B140,B65,C76
typical_cds_rare	Chr2	39331257	TC	T	INDEL	1bp_deletion	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B107,B118,B140,B65,C76
lof_cds	Chr2	39331270	G	GAC	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	10	B124,B132,B19,B2,B52,B61,B7,B74,C49,C50
typical_cds_rare	Chr2	39331309	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	1	D10
lof_cds	Chr2	39331318	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	11	A23,B111,B136,B24,B52,B91,C16,C46,C51,C87,D6
lof_cds	Chr2	39331494	A	ATG	INDEL	2bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	9	B111,B24,B48,B58,B91,C16,C46,C51,D6
lof_cds	Chr2	39331509	TCC	T	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	A21,C36,C82
typical_cds_rare	Chr2	39331509	TCC	T	INDEL	2bp_deletion	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	A21,C36,C82
lof_cds	Chr2	39331532	AG	A	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B102,B119,B124,B61,B7
typical_cds_rare	Chr2	39331532	AG	A	INDEL	1bp_deletion	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B102,B119,B124,B61,B7
typical_cds_rare	Chr2	39331533	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	A3,B57,C10,D10,D3
lof_cds	Chr2	39331562	A	AT	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	4	B48,B91,C16,C46
typical_cds_rare	Chr2	39331562	A	AT	INDEL	1bp_insertion	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	4	B48,B91,C16,C46
lof_cds	Chr2	39331564	C	CA	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	11	B100,B102,B107,B118,B119,B124,B140,B61,B7,B70,B75
lof_cds	Chr2	39331570	TG	T	INDEL	1bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	15	B100,B102,B107,B118,B119,B124,B140,B48,B61,B7,B70,B75,B91,C16,C46
lof_cds	Chr2	39331578	CGT	C	INDEL	2bp_deletion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	6	B102,B119,B124,B61,B7,B70
typical_cds_rare	Chr2	39331603	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B104,B4,C87
typical_cds_rare	Chr2	39331606	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	5	B119,B124,B37,B61,B70
lof_cds	Chr2	39331642	G	A	SNV	EMS_canonical_SNV	stop_gained	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	11	A1,A15,B105,B106,B11,B112,B45,B55,B87,C34,C40
lof_cds	Chr2	39331654	A	AC	INDEL	1bp_insertion	frameshift_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	34	A11,A18,B10,B102,B105,B11,B120,B123,B133,B134,B2,B25,B34,B4,B41,B57,B70,B75,B77,B78,B88,C21,C3,C35,C36,C38,C39,C51,C63,C77,C85,C9,D3,D8
typical_cds_rare	Chr2	39332677	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	B132,D6
typical_cds_rare	Chr2	39332683	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B100,B72,B78
typical_cds_rare	Chr2	39332701	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B126,B53,B71
typical_cds_rare	Chr2	39332712	C	T	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	3	B33,B46,C60
typical_cds_rare	Chr2	39332713	G	A	SNV	EMS_canonical_SNV	CDS_variant	LOC131008433	SmilChr02G002207	131008433	rna-XM_057935314.1	2	B100,B78